data_6JWA # _model_server_result.job_id twnNdm28YNAIbKE7nGB7Qg _model_server_result.datetime_utc '2024-11-29 23:21:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jwa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":406}' # _entry.id 6JWA # _exptl.entry_id 6JWA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JWA _cell.length_a 48.21 _cell.length_b 78.936 _cell.length_c 82.842 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JWA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 118 n n C1 C2 EDO sing 119 n n C1 H11 EDO sing 120 n n C1 H12 EDO sing 121 n n O1 HO1 EDO sing 122 n n C2 O2 EDO sing 123 n n C2 H21 EDO sing 124 n n C2 H22 EDO sing 125 n n O2 HO2 EDO sing 126 n n # _atom_sites.entry_id 6JWA _atom_sites.fract_transf_matrix[1][1] 0.020743 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012668 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012071 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 5ID A 1 401 1 5ID 5ID . C 3 EDO A 1 402 1 EDO EDO . D 3 EDO A 1 403 2 EDO EDO . E 3 EDO A 1 404 3 EDO EDO . F 3 EDO A 1 405 4 EDO EDO . G 3 EDO A 1 406 7 EDO EDO . H 3 EDO A 1 407 8 EDO EDO . I 4 HOH A 1 501 67 HOH HOH . I 4 HOH A 2 502 45 HOH HOH . I 4 HOH A 3 503 41 HOH HOH . I 4 HOH A 4 504 90 HOH HOH . I 4 HOH A 5 505 109 HOH HOH . I 4 HOH A 6 506 85 HOH HOH . I 4 HOH A 7 507 37 HOH HOH . I 4 HOH A 8 508 64 HOH HOH . I 4 HOH A 9 509 100 HOH HOH . I 4 HOH A 10 510 32 HOH HOH . I 4 HOH A 11 511 52 HOH HOH . I 4 HOH A 12 512 117 HOH HOH . I 4 HOH A 13 513 25 HOH HOH . I 4 HOH A 14 514 145 HOH HOH . I 4 HOH A 15 515 48 HOH HOH . I 4 HOH A 16 516 78 HOH HOH . I 4 HOH A 17 517 103 HOH HOH . I 4 HOH A 18 518 113 HOH HOH . I 4 HOH A 19 519 4 HOH HOH . I 4 HOH A 20 520 10 HOH HOH . I 4 HOH A 21 521 133 HOH HOH . I 4 HOH A 22 522 173 HOH HOH . I 4 HOH A 23 523 15 HOH HOH . I 4 HOH A 24 524 68 HOH HOH . I 4 HOH A 25 525 146 HOH HOH . I 4 HOH A 26 526 58 HOH HOH . I 4 HOH A 27 527 119 HOH HOH . I 4 HOH A 28 528 57 HOH HOH . I 4 HOH A 29 529 116 HOH HOH . I 4 HOH A 30 530 107 HOH HOH . I 4 HOH A 31 531 30 HOH HOH . I 4 HOH A 32 532 62 HOH HOH . I 4 HOH A 33 533 18 HOH HOH . I 4 HOH A 34 534 44 HOH HOH . I 4 HOH A 35 535 50 HOH HOH . I 4 HOH A 36 536 3 HOH HOH . I 4 HOH A 37 537 20 HOH HOH . I 4 HOH A 38 538 26 HOH HOH . I 4 HOH A 39 539 156 HOH HOH . I 4 HOH A 40 540 110 HOH HOH . I 4 HOH A 41 541 148 HOH HOH . I 4 HOH A 42 542 125 HOH HOH . I 4 HOH A 43 543 122 HOH HOH . I 4 HOH A 44 544 14 HOH HOH . I 4 HOH A 45 545 46 HOH HOH . I 4 HOH A 46 546 36 HOH HOH . I 4 HOH A 47 547 53 HOH HOH . I 4 HOH A 48 548 136 HOH HOH . I 4 HOH A 49 549 16 HOH HOH . I 4 HOH A 50 550 59 HOH HOH . I 4 HOH A 51 551 56 HOH HOH . I 4 HOH A 52 552 29 HOH HOH . I 4 HOH A 53 553 51 HOH HOH . I 4 HOH A 54 554 23 HOH HOH . I 4 HOH A 55 555 12 HOH HOH . I 4 HOH A 56 556 11 HOH HOH . I 4 HOH A 57 557 60 HOH HOH . I 4 HOH A 58 558 95 HOH HOH . I 4 HOH A 59 559 126 HOH HOH . I 4 HOH A 60 560 42 HOH HOH . I 4 HOH A 61 561 80 HOH HOH . I 4 HOH A 62 562 17 HOH HOH . I 4 HOH A 63 563 31 HOH HOH . I 4 HOH A 64 564 72 HOH HOH . I 4 HOH A 65 565 34 HOH HOH . I 4 HOH A 66 566 7 HOH HOH . I 4 HOH A 67 567 69 HOH HOH . I 4 HOH A 68 568 24 HOH HOH . I 4 HOH A 69 569 92 HOH HOH . I 4 HOH A 70 570 70 HOH HOH . I 4 HOH A 71 571 61 HOH HOH . I 4 HOH A 72 572 88 HOH HOH . I 4 HOH A 73 573 157 HOH HOH . I 4 HOH A 74 574 153 HOH HOH . I 4 HOH A 75 575 65 HOH HOH . I 4 HOH A 76 576 71 HOH HOH . I 4 HOH A 77 577 22 HOH HOH . I 4 HOH A 78 578 75 HOH HOH . I 4 HOH A 79 579 9 HOH HOH . I 4 HOH A 80 580 77 HOH HOH . I 4 HOH A 81 581 66 HOH HOH . I 4 HOH A 82 582 5 HOH HOH . I 4 HOH A 83 583 13 HOH HOH . I 4 HOH A 84 584 1 HOH HOH . I 4 HOH A 85 585 74 HOH HOH . I 4 HOH A 86 586 40 HOH HOH . I 4 HOH A 87 587 84 HOH HOH . I 4 HOH A 88 588 79 HOH HOH . I 4 HOH A 89 589 152 HOH HOH . I 4 HOH A 90 590 111 HOH HOH . I 4 HOH A 91 591 47 HOH HOH . I 4 HOH A 92 592 19 HOH HOH . I 4 HOH A 93 593 99 HOH HOH . I 4 HOH A 94 594 121 HOH HOH . I 4 HOH A 95 595 55 HOH HOH . I 4 HOH A 96 596 102 HOH HOH . I 4 HOH A 97 597 35 HOH HOH . I 4 HOH A 98 598 86 HOH HOH . I 4 HOH A 99 599 97 HOH HOH . I 4 HOH A 100 600 63 HOH HOH . I 4 HOH A 101 601 159 HOH HOH . I 4 HOH A 102 602 170 HOH HOH . I 4 HOH A 103 603 39 HOH HOH . I 4 HOH A 104 604 38 HOH HOH . I 4 HOH A 105 605 6 HOH HOH . I 4 HOH A 106 606 140 HOH HOH . I 4 HOH A 107 607 28 HOH HOH . I 4 HOH A 108 608 154 HOH HOH . I 4 HOH A 109 609 162 HOH HOH . I 4 HOH A 110 610 27 HOH HOH . I 4 HOH A 111 611 172 HOH HOH . I 4 HOH A 112 612 144 HOH HOH . I 4 HOH A 113 613 168 HOH HOH . I 4 HOH A 114 614 94 HOH HOH . I 4 HOH A 115 615 2 HOH HOH . I 4 HOH A 116 616 158 HOH HOH . I 4 HOH A 117 617 150 HOH HOH . I 4 HOH A 118 618 139 HOH HOH . I 4 HOH A 119 619 129 HOH HOH . I 4 HOH A 120 620 101 HOH HOH . I 4 HOH A 121 621 82 HOH HOH . I 4 HOH A 122 622 81 HOH HOH . I 4 HOH A 123 623 123 HOH HOH . I 4 HOH A 124 624 104 HOH HOH . I 4 HOH A 125 625 21 HOH HOH . I 4 HOH A 126 626 83 HOH HOH . I 4 HOH A 127 627 165 HOH HOH . I 4 HOH A 128 628 164 HOH HOH . I 4 HOH A 129 629 91 HOH HOH . I 4 HOH A 130 630 169 HOH HOH . I 4 HOH A 131 631 147 HOH HOH . I 4 HOH A 132 632 87 HOH HOH . I 4 HOH A 133 633 132 HOH HOH . I 4 HOH A 134 634 155 HOH HOH . I 4 HOH A 135 635 167 HOH HOH . I 4 HOH A 136 636 160 HOH HOH . I 4 HOH A 137 637 166 HOH HOH . I 4 HOH A 138 638 89 HOH HOH . I 4 HOH A 139 639 171 HOH HOH . I 4 HOH A 140 640 76 HOH HOH . I 4 HOH A 141 641 141 HOH HOH . I 4 HOH A 142 642 93 HOH HOH . I 4 HOH A 143 643 108 HOH HOH . I 4 HOH A 144 644 138 HOH HOH . I 4 HOH A 145 645 127 HOH HOH . I 4 HOH A 146 646 8 HOH HOH . I 4 HOH A 147 647 143 HOH HOH . I 4 HOH A 148 648 49 HOH HOH . I 4 HOH A 149 649 163 HOH HOH . I 4 HOH A 150 650 54 HOH HOH . I 4 HOH A 151 651 124 HOH HOH . I 4 HOH A 152 652 130 HOH HOH . I 4 HOH A 153 653 174 HOH HOH . I 4 HOH A 154 654 106 HOH HOH . I 4 HOH A 155 655 161 HOH HOH . I 4 HOH A 156 656 149 HOH HOH . I 4 HOH A 157 657 175 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 3 -15.511 5.192 -9.12 1 19.63 ? C1 EDO 406 A 1 HETATM 2 O O1 EDO . . . G 3 -15.328 3.786 -9.036 1 19.63 ? O1 EDO 406 A 1 HETATM 3 C C2 EDO . . . G 3 -15.808 5.48 -10.569 1 19.63 ? C2 EDO 406 A 1 HETATM 4 O O2 EDO . . . G 3 -14.652 5.209 -11.365 1 19.63 ? O2 EDO 406 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #