data_6JWQ
#
_model_server_result.job_id            ugZ3WYnDj8E438WD-RLPFA 
_model_server_result.datetime_utc      '2024-11-23 21:52:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jwq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":801}' 
#
_entry.id    6JWQ 
#
_exptl.entry_id    6JWQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              347.221 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ADENOSINE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6JWQ 
_cell.length_a            101.175 
_cell.length_b            137.224 
_cell.length_c            139.282 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JWQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLU 42 A GLU 42 1_555 E CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? 
metalc ? metalc2 A OE1 GLU 42 A GLU 42 1_555 E CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? 
metalc ? metalc3 A O GLY 46 A GLY 46 1_555 E CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.759 ? 
metalc ? metalc4 A OE1 GLU 99 A GLU 99 1_555 E CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.566 ? 
metalc ? metalc5 A OE2 GLU 99 A GLU 99 1_555 E CA CA . A CA 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? 
metalc ? metalc6 A OD1 ASP 208 A ASP 208 1_555 C MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc7 A OD1 ASP 210 A ASP 210 1_555 C MG MG . A MG 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc8 C MG MG . A MG 801 1_555 D O3B ATP . A ATP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.874 ? 
metalc ? metalc9 C MG MG . A MG 801 1_555 D O2B ATP . A ATP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? 
metalc ? metalc10 C MG MG . A MG 801 1_555 D O3A ATP . A ATP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? 
metalc ? metalc11 C MG MG . A MG 801 1_555 J O HOH . A HOH 922 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.783 ? 
metalc ? metalc12 B OD1 ASP 208 B ASP 208 1_555 H MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? 
metalc ? metalc13 B OD2 ASP 208 B ASP 208 1_555 H MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.471 ? 
metalc ? metalc14 B OD1 ASP 210 B ASP 210 1_555 H MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc15 G O2P AMP . B AMP 801 1_555 H MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.707 ? 
metalc ? metalc16 H MG MG . B MG 802 1_555 K O HOH . B HOH 932 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
#
_chem_comp.formula           'C10 H14 N5 O7 P' 
_chem_comp.formula_weight    347.221 
_chem_comp.id                AMP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ADENOSINE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P AMP doub 19 n n 
P O2P AMP sing 20 n n 
P O3P AMP sing 21 n n 
P O5' AMP sing 22 n n 
O2P HOP2 AMP sing 23 n n 
O3P HOP3 AMP sing 24 n n 
O5' C5' AMP sing 25 n n 
C5' C4' AMP sing 26 n n 
C5' "H5'1" AMP sing 27 n n 
C5' "H5'2" AMP sing 28 n n 
C4' O4' AMP sing 29 n n 
C4' C3' AMP sing 30 n n 
C4' H4' AMP sing 31 n n 
O4' C1' AMP sing 32 n n 
C3' O3' AMP sing 33 n n 
C3' C2' AMP sing 34 n n 
C3' H3' AMP sing 35 n n 
O3' HO3' AMP sing 36 n n 
C2' O2' AMP sing 37 n n 
C2' C1' AMP sing 38 n n 
C2' H2' AMP sing 39 n n 
O2' HO2' AMP sing 40 n n 
C1' N9 AMP sing 41 n n 
C1' H1' AMP sing 42 n n 
N9 C8 AMP sing 43 n y 
N9 C4 AMP sing 44 n y 
C8 N7 AMP doub 45 n y 
C8 H8 AMP sing 46 n n 
N7 C5 AMP sing 47 n y 
C5 C6 AMP sing 48 n y 
C5 C4 AMP doub 49 n y 
C6 N6 AMP sing 50 n n 
C6 N1 AMP doub 51 n y 
N6 HN61 AMP sing 52 n n 
N6 HN62 AMP sing 53 n n 
N1 C2 AMP sing 54 n y 
C2 N3 AMP doub 55 n y 
C2 H2 AMP sing 56 n n 
N3 C4 AMP sing 57 n y 
#
_atom_sites.entry_id                     6JWQ 
_atom_sites.fract_transf_matrix[1][1]    0.009884 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007287 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00718 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 801 802 MG MG . 
D 3 ATP A 1 802 804 ATP ATP . 
E 4 CA A 1 803 1 CA CA . 
F 5 ACT A 1 804 2 ACT ACT . 
G 6 AMP B 1 801 804 AMP AMP . 
H 2 MG B 1 802 802 MG MG . 
I 5 ACT B 1 803 3 ACT ACT . 
J 7 HOH A 1 901 40 HOH HOH . 
J 7 HOH A 2 902 88 HOH HOH . 
J 7 HOH A 3 903 78 HOH HOH . 
J 7 HOH A 4 904 49 HOH HOH . 
J 7 HOH A 5 905 107 HOH HOH . 
J 7 HOH A 6 906 90 HOH HOH . 
J 7 HOH A 7 907 112 HOH HOH . 
J 7 HOH A 8 908 45 HOH HOH . 
J 7 HOH A 9 909 98 HOH HOH . 
J 7 HOH A 10 910 108 HOH HOH . 
J 7 HOH A 11 911 8 HOH HOH . 
J 7 HOH A 12 912 31 HOH HOH . 
J 7 HOH A 13 913 85 HOH HOH . 
J 7 HOH A 14 914 113 HOH HOH . 
J 7 HOH A 15 915 27 HOH HOH . 
J 7 HOH A 16 916 71 HOH HOH . 
J 7 HOH A 17 917 62 HOH HOH . 
J 7 HOH A 18 918 69 HOH HOH . 
J 7 HOH A 19 919 56 HOH HOH . 
J 7 HOH A 20 920 79 HOH HOH . 
J 7 HOH A 21 921 7 HOH HOH . 
J 7 HOH A 22 922 20 HOH HOH . 
J 7 HOH A 23 923 81 HOH HOH . 
J 7 HOH A 24 924 3 HOH HOH . 
J 7 HOH A 25 925 12 HOH HOH . 
J 7 HOH A 26 926 120 HOH HOH . 
J 7 HOH A 27 927 72 HOH HOH . 
J 7 HOH A 28 928 68 HOH HOH . 
J 7 HOH A 29 929 26 HOH HOH . 
J 7 HOH A 30 930 80 HOH HOH . 
J 7 HOH A 31 931 77 HOH HOH . 
J 7 HOH A 32 932 63 HOH HOH . 
J 7 HOH A 33 933 17 HOH HOH . 
J 7 HOH A 34 934 9 HOH HOH . 
J 7 HOH A 35 935 103 HOH HOH . 
J 7 HOH A 36 936 110 HOH HOH . 
J 7 HOH A 37 937 82 HOH HOH . 
J 7 HOH A 38 938 14 HOH HOH . 
J 7 HOH A 39 939 46 HOH HOH . 
J 7 HOH A 40 940 73 HOH HOH . 
J 7 HOH A 41 941 86 HOH HOH . 
J 7 HOH A 42 942 37 HOH HOH . 
J 7 HOH A 43 943 38 HOH HOH . 
J 7 HOH A 44 944 18 HOH HOH . 
J 7 HOH A 45 945 53 HOH HOH . 
J 7 HOH A 46 946 117 HOH HOH . 
J 7 HOH A 47 947 119 HOH HOH . 
J 7 HOH A 48 948 57 HOH HOH . 
J 7 HOH A 49 949 94 HOH HOH . 
J 7 HOH A 50 950 123 HOH HOH . 
J 7 HOH A 51 951 70 HOH HOH . 
J 7 HOH A 52 952 22 HOH HOH . 
J 7 HOH A 53 953 5 HOH HOH . 
J 7 HOH A 54 954 15 HOH HOH . 
J 7 HOH A 55 955 13 HOH HOH . 
J 7 HOH A 56 956 30 HOH HOH . 
J 7 HOH A 57 957 104 HOH HOH . 
J 7 HOH A 58 958 54 HOH HOH . 
J 7 HOH A 59 959 83 HOH HOH . 
J 7 HOH A 60 960 60 HOH HOH . 
J 7 HOH A 61 961 96 HOH HOH . 
J 7 HOH A 62 962 52 HOH HOH . 
J 7 HOH A 63 963 4 HOH HOH . 
J 7 HOH A 64 964 130 HOH HOH . 
J 7 HOH A 65 965 6 HOH HOH . 
J 7 HOH A 66 966 100 HOH HOH . 
J 7 HOH A 67 967 127 HOH HOH . 
J 7 HOH A 68 968 23 HOH HOH . 
J 7 HOH A 69 969 92 HOH HOH . 
J 7 HOH A 70 970 99 HOH HOH . 
K 7 HOH B 1 901 126 HOH HOH . 
K 7 HOH B 2 902 109 HOH HOH . 
K 7 HOH B 3 903 47 HOH HOH . 
K 7 HOH B 4 904 55 HOH HOH . 
K 7 HOH B 5 905 76 HOH HOH . 
K 7 HOH B 6 906 128 HOH HOH . 
K 7 HOH B 7 907 124 HOH HOH . 
K 7 HOH B 8 908 89 HOH HOH . 
K 7 HOH B 9 909 51 HOH HOH . 
K 7 HOH B 10 910 39 HOH HOH . 
K 7 HOH B 11 911 105 HOH HOH . 
K 7 HOH B 12 912 19 HOH HOH . 
K 7 HOH B 13 913 111 HOH HOH . 
K 7 HOH B 14 914 74 HOH HOH . 
K 7 HOH B 15 915 42 HOH HOH . 
K 7 HOH B 16 916 10 HOH HOH . 
K 7 HOH B 17 917 84 HOH HOH . 
K 7 HOH B 18 918 114 HOH HOH . 
K 7 HOH B 19 919 66 HOH HOH . 
K 7 HOH B 20 920 58 HOH HOH . 
K 7 HOH B 21 921 106 HOH HOH . 
K 7 HOH B 22 922 59 HOH HOH . 
K 7 HOH B 23 923 75 HOH HOH . 
K 7 HOH B 24 924 41 HOH HOH . 
K 7 HOH B 25 925 29 HOH HOH . 
K 7 HOH B 26 926 91 HOH HOH . 
K 7 HOH B 27 927 25 HOH HOH . 
K 7 HOH B 28 928 28 HOH HOH . 
K 7 HOH B 29 929 122 HOH HOH . 
K 7 HOH B 30 930 35 HOH HOH . 
K 7 HOH B 31 931 43 HOH HOH . 
K 7 HOH B 32 932 101 HOH HOH . 
K 7 HOH B 33 933 16 HOH HOH . 
K 7 HOH B 34 934 87 HOH HOH . 
K 7 HOH B 35 935 115 HOH HOH . 
K 7 HOH B 36 936 65 HOH HOH . 
K 7 HOH B 37 937 118 HOH HOH . 
K 7 HOH B 38 938 102 HOH HOH . 
K 7 HOH B 39 939 34 HOH HOH . 
K 7 HOH B 40 940 48 HOH HOH . 
K 7 HOH B 41 941 11 HOH HOH . 
K 7 HOH B 42 942 36 HOH HOH . 
K 7 HOH B 43 943 32 HOH HOH . 
K 7 HOH B 44 944 1 HOH HOH . 
K 7 HOH B 45 945 129 HOH HOH . 
K 7 HOH B 46 946 21 HOH HOH . 
K 7 HOH B 47 947 97 HOH HOH . 
K 7 HOH B 48 948 24 HOH HOH . 
K 7 HOH B 49 949 67 HOH HOH . 
K 7 HOH B 50 950 64 HOH HOH . 
K 7 HOH B 51 951 33 HOH HOH . 
K 7 HOH B 52 952 50 HOH HOH . 
K 7 HOH B 53 953 2 HOH HOH . 
K 7 HOH B 54 954 121 HOH HOH . 
K 7 HOH B 55 955 116 HOH HOH . 
K 7 HOH B 56 956 93 HOH HOH . 
K 7 HOH B 57 957 61 HOH HOH . 
K 7 HOH B 58 958 95 HOH HOH . 
K 7 HOH B 59 959 44 HOH HOH . 
K 7 HOH B 60 960 125 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P AMP . . . G 6 -48.728 -4.923 12.617 1 110.32 ? P AMP 801 B 1 
HETATM 2 O O1P AMP . . . G 6 -47.701 -4.195 11.773 1 107.6 ? O1P AMP 801 B 1 
HETATM 3 O O2P AMP . . . G 6 -48.25 -5.283 14.009 1 107.19 ? O2P AMP 801 B 1 
HETATM 4 O O3P AMP . . . G 6 -50.111 -4.312 12.579 1 104.79 ? O3P AMP 801 B 1 
HETATM 5 O O5' AMP . . . G 6 -48.906 -6.343 11.873 1 95.79 ? O5' AMP 801 B 1 
HETATM 6 C C5' AMP . . . G 6 -49.219 -6.36 10.485 1 86.57 ? C5' AMP 801 B 1 
HETATM 7 C C4' AMP . . . G 6 -49.614 -7.743 10.004 1 81.54 ? C4' AMP 801 B 1 
HETATM 8 O O4' AMP . . . G 6 -48.471 -8.585 9.933 1 82 ? O4' AMP 801 B 1 
HETATM 9 C C3' AMP . . . G 6 -50.623 -8.468 10.883 1 80.97 ? C3' AMP 801 B 1 
HETATM 10 O O3' AMP . . . G 6 -51.778 -8.732 10.077 1 84.1 ? O3' AMP 801 B 1 
HETATM 11 C C2' AMP . . . G 6 -49.939 -9.764 11.278 1 77.85 ? C2' AMP 801 B 1 
HETATM 12 O O2' AMP . . . G 6 -50.831 -10.871 11.298 1 74.75 ? O2' AMP 801 B 1 
HETATM 13 C C1' AMP . . . G 6 -48.927 -9.92 10.157 1 77.64 ? C1' AMP 801 B 1 
HETATM 14 N N9 AMP . . . G 6 -47.783 -10.838 10.394 1 74.14 ? N9 AMP 801 B 1 
HETATM 15 C C8 AMP . . . G 6 -47.318 -11.681 9.452 1 77.23 ? C8 AMP 801 B 1 
HETATM 16 N N7 AMP . . . G 6 -46.252 -12.402 9.885 1 73.25 ? N7 AMP 801 B 1 
HETATM 17 C C5 AMP . . . G 6 -46.018 -12.001 11.139 1 68.9 ? C5 AMP 801 B 1 
HETATM 18 C C6 AMP . . . G 6 -45.035 -12.358 12.166 1 62.26 ? C6 AMP 801 B 1 
HETATM 19 N N6 AMP . . . G 6 -44.118 -13.293 11.897 1 60.86 ? N6 AMP 801 B 1 
HETATM 20 N N1 AMP . . . G 6 -45.096 -11.726 13.353 1 69.09 ? N1 AMP 801 B 1 
HETATM 21 C C2 AMP . . . G 6 -46.031 -10.775 13.614 1 74.68 ? C2 AMP 801 B 1 
HETATM 22 N N3 AMP . . . G 6 -46.966 -10.388 12.718 1 73.46 ? N3 AMP 801 B 1 
HETATM 23 C C4 AMP . . . G 6 -47.011 -10.961 11.481 1 72.1 ? C4 AMP 801 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           799 
_model_server_stats.encode_time_ms          15 
_model_server_stats.element_count           23 
#