data_6JWT # _model_server_result.job_id 6Te_jbX7wvFgZjru-wvkvw _model_server_result.datetime_utc '2024-11-08 06:11:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jwt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":805}' # _entry.id 6JWT # _exptl.entry_id 6JWT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JWT _cell.length_a 100.627 _cell.length_b 136.597 _cell.length_c 138.518 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JWT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 H N N ? 6 I N N ? 6 N N N ? 6 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 42 A GLU 42 1_555 G CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.491 ? metalc ? metalc2 A OE1 GLU 42 A GLU 42 1_555 G CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc3 A O GLY 46 A GLY 46 1_555 G CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc4 A OE1 GLU 99 A GLU 99 1_555 G CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc5 A OE2 GLU 99 A GLU 99 1_555 G CA CA . A CA 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc6 A OD1 ASP 208 A ASP 208 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc7 A OD2 ASP 208 A ASP 208 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc8 A OD1 ASP 210 A ASP 210 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc9 A OD2 ASP 210 A ASP 210 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? metalc ? metalc10 C O1P AMP . A AMP 801 1_555 D MG MG . A MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc11 C O3P AMP . A AMP 801 1_555 E MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc12 D MG MG . A MG 802 1_555 P O HOH . A HOH 912 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.245 ? metalc ? metalc13 E MG MG . A MG 803 1_555 P O HOH . A HOH 968 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc14 B O GLU 42 B GLU 42 1_555 M CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc15 B OE2 GLU 42 B GLU 42 1_555 M CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc16 B O GLY 46 B GLY 46 1_555 M CA CA . B CA 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc17 B OD1 ASP 208 B ASP 208 1_555 K MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? metalc ? metalc18 B OD2 ASP 208 B ASP 208 1_555 K MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc19 B OD1 ASP 210 B ASP 210 1_555 K MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc20 J O1B ATP . B ATP 801 1_555 K MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc21 J O1A ATP . B ATP 801 1_555 K MG MG . B MG 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc22 K MG MG . B MG 802 1_555 Q O HOH . B HOH 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 6JWT _atom_sites.fract_transf_matrix[1][1] 0.009938 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007321 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AMP A 1 801 803 AMP AMP . D 3 MG A 1 802 804 MG MG . E 3 MG A 1 803 805 MG MG . F 4 PT1 A 1 804 801 PT1 PT1 . G 5 CA A 1 805 1 CA CA . H 6 ACT A 1 806 3 ACT ACT . I 6 ACT A 1 807 4 ACT ACT . J 7 ATP B 1 801 803 ATP ATP . K 3 MG B 1 802 804 MG MG . L 4 PT1 B 1 803 801 PT1 PT1 . M 5 CA B 1 804 2 CA CA . N 6 ACT B 1 805 5 ACT ACT . O 6 ACT B 1 806 6 ACT ACT . P 8 HOH A 1 901 131 HOH HOH . P 8 HOH A 2 902 135 HOH HOH . P 8 HOH A 3 903 28 HOH HOH . P 8 HOH A 4 904 55 HOH HOH . P 8 HOH A 5 905 23 HOH HOH . P 8 HOH A 6 906 15 HOH HOH . P 8 HOH A 7 907 30 HOH HOH . P 8 HOH A 8 908 117 HOH HOH . P 8 HOH A 9 909 106 HOH HOH . P 8 HOH A 10 910 168 HOH HOH . P 8 HOH A 11 911 172 HOH HOH . P 8 HOH A 12 912 114 HOH HOH . P 8 HOH A 13 913 96 HOH HOH . P 8 HOH A 14 914 79 HOH HOH . P 8 HOH A 15 915 1 HOH HOH . P 8 HOH A 16 916 132 HOH HOH . P 8 HOH A 17 917 101 HOH HOH . P 8 HOH A 18 918 71 HOH HOH . P 8 HOH A 19 919 115 HOH HOH . P 8 HOH A 20 920 9 HOH HOH . P 8 HOH A 21 921 113 HOH HOH . P 8 HOH A 22 922 174 HOH HOH . P 8 HOH A 23 923 70 HOH HOH . P 8 HOH A 24 924 29 HOH HOH . P 8 HOH A 25 925 75 HOH HOH . P 8 HOH A 26 926 97 HOH HOH . P 8 HOH A 27 927 119 HOH HOH . P 8 HOH A 28 928 156 HOH HOH . P 8 HOH A 29 929 155 HOH HOH . P 8 HOH A 30 930 160 HOH HOH . P 8 HOH A 31 931 162 HOH HOH . P 8 HOH A 32 932 3 HOH HOH . P 8 HOH A 33 933 41 HOH HOH . P 8 HOH A 34 934 126 HOH HOH . P 8 HOH A 35 935 76 HOH HOH . P 8 HOH A 36 936 165 HOH HOH . P 8 HOH A 37 937 167 HOH HOH . P 8 HOH A 38 938 53 HOH HOH . P 8 HOH A 39 939 54 HOH HOH . P 8 HOH A 40 940 150 HOH HOH . P 8 HOH A 41 941 153 HOH HOH . P 8 HOH A 42 942 31 HOH HOH . P 8 HOH A 43 943 45 HOH HOH . P 8 HOH A 44 944 78 HOH HOH . P 8 HOH A 45 945 33 HOH HOH . P 8 HOH A 46 946 66 HOH HOH . P 8 HOH A 47 947 161 HOH HOH . P 8 HOH A 48 948 16 HOH HOH . P 8 HOH A 49 949 99 HOH HOH . P 8 HOH A 50 950 13 HOH HOH . P 8 HOH A 51 951 120 HOH HOH . P 8 HOH A 52 952 163 HOH HOH . P 8 HOH A 53 953 63 HOH HOH . P 8 HOH A 54 954 100 HOH HOH . P 8 HOH A 55 955 5 HOH HOH . P 8 HOH A 56 956 74 HOH HOH . P 8 HOH A 57 957 35 HOH HOH . P 8 HOH A 58 958 77 HOH HOH . P 8 HOH A 59 959 152 HOH HOH . P 8 HOH A 60 960 157 HOH HOH . P 8 HOH A 61 961 149 HOH HOH . P 8 HOH A 62 962 134 HOH HOH . P 8 HOH A 63 963 4 HOH HOH . P 8 HOH A 64 964 148 HOH HOH . P 8 HOH A 65 965 39 HOH HOH . P 8 HOH A 66 966 112 HOH HOH . P 8 HOH A 67 967 133 HOH HOH . P 8 HOH A 68 968 103 HOH HOH . P 8 HOH A 69 969 51 HOH HOH . P 8 HOH A 70 970 42 HOH HOH . P 8 HOH A 71 971 73 HOH HOH . P 8 HOH A 72 972 36 HOH HOH . P 8 HOH A 73 973 98 HOH HOH . P 8 HOH A 74 974 7 HOH HOH . P 8 HOH A 75 975 8 HOH HOH . P 8 HOH A 76 976 49 HOH HOH . P 8 HOH A 77 977 171 HOH HOH . P 8 HOH A 78 978 173 HOH HOH . P 8 HOH A 79 979 32 HOH HOH . P 8 HOH A 80 980 20 HOH HOH . P 8 HOH A 81 981 11 HOH HOH . P 8 HOH A 82 982 72 HOH HOH . P 8 HOH A 83 983 118 HOH HOH . P 8 HOH A 84 984 154 HOH HOH . P 8 HOH A 85 985 18 HOH HOH . P 8 HOH A 86 986 12 HOH HOH . P 8 HOH A 87 987 136 HOH HOH . Q 8 HOH B 1 901 122 HOH HOH . Q 8 HOH B 2 902 104 HOH HOH . Q 8 HOH B 3 903 130 HOH HOH . Q 8 HOH B 4 904 58 HOH HOH . Q 8 HOH B 5 905 22 HOH HOH . Q 8 HOH B 6 906 116 HOH HOH . Q 8 HOH B 7 907 85 HOH HOH . Q 8 HOH B 8 908 82 HOH HOH . Q 8 HOH B 9 909 107 HOH HOH . Q 8 HOH B 10 910 86 HOH HOH . Q 8 HOH B 11 911 47 HOH HOH . Q 8 HOH B 12 912 102 HOH HOH . Q 8 HOH B 13 913 60 HOH HOH . Q 8 HOH B 14 914 84 HOH HOH . Q 8 HOH B 15 915 43 HOH HOH . Q 8 HOH B 16 916 6 HOH HOH . Q 8 HOH B 17 917 56 HOH HOH . Q 8 HOH B 18 918 124 HOH HOH . Q 8 HOH B 19 919 90 HOH HOH . Q 8 HOH B 20 920 17 HOH HOH . Q 8 HOH B 21 921 140 HOH HOH . Q 8 HOH B 22 922 143 HOH HOH . Q 8 HOH B 23 923 94 HOH HOH . Q 8 HOH B 24 924 137 HOH HOH . Q 8 HOH B 25 925 69 HOH HOH . Q 8 HOH B 26 926 81 HOH HOH . Q 8 HOH B 27 927 147 HOH HOH . Q 8 HOH B 28 928 48 HOH HOH . Q 8 HOH B 29 929 111 HOH HOH . Q 8 HOH B 30 930 169 HOH HOH . Q 8 HOH B 31 931 146 HOH HOH . Q 8 HOH B 32 932 65 HOH HOH . Q 8 HOH B 33 933 158 HOH HOH . Q 8 HOH B 34 934 145 HOH HOH . Q 8 HOH B 35 935 129 HOH HOH . Q 8 HOH B 36 936 151 HOH HOH . Q 8 HOH B 37 937 14 HOH HOH . Q 8 HOH B 38 938 89 HOH HOH . Q 8 HOH B 39 939 27 HOH HOH . Q 8 HOH B 40 940 125 HOH HOH . Q 8 HOH B 41 941 141 HOH HOH . Q 8 HOH B 42 942 2 HOH HOH . Q 8 HOH B 43 943 59 HOH HOH . Q 8 HOH B 44 944 88 HOH HOH . Q 8 HOH B 45 945 68 HOH HOH . Q 8 HOH B 46 946 21 HOH HOH . Q 8 HOH B 47 947 26 HOH HOH . Q 8 HOH B 48 948 138 HOH HOH . Q 8 HOH B 49 949 93 HOH HOH . Q 8 HOH B 50 950 92 HOH HOH . Q 8 HOH B 51 951 164 HOH HOH . Q 8 HOH B 52 952 110 HOH HOH . Q 8 HOH B 53 953 139 HOH HOH . Q 8 HOH B 54 954 38 HOH HOH . Q 8 HOH B 55 955 95 HOH HOH . Q 8 HOH B 56 956 87 HOH HOH . Q 8 HOH B 57 957 25 HOH HOH . Q 8 HOH B 58 958 62 HOH HOH . Q 8 HOH B 59 959 166 HOH HOH . Q 8 HOH B 60 960 108 HOH HOH . Q 8 HOH B 61 961 144 HOH HOH . Q 8 HOH B 62 962 127 HOH HOH . Q 8 HOH B 63 963 46 HOH HOH . Q 8 HOH B 64 964 50 HOH HOH . Q 8 HOH B 65 965 83 HOH HOH . Q 8 HOH B 66 966 19 HOH HOH . Q 8 HOH B 67 967 142 HOH HOH . Q 8 HOH B 68 968 105 HOH HOH . Q 8 HOH B 69 969 34 HOH HOH . Q 8 HOH B 70 970 109 HOH HOH . Q 8 HOH B 71 971 44 HOH HOH . Q 8 HOH B 72 972 52 HOH HOH . Q 8 HOH B 73 973 80 HOH HOH . Q 8 HOH B 74 974 91 HOH HOH . Q 8 HOH B 75 975 24 HOH HOH . Q 8 HOH B 76 976 37 HOH HOH . Q 8 HOH B 77 977 61 HOH HOH . Q 8 HOH B 78 978 10 HOH HOH . Q 8 HOH B 79 979 57 HOH HOH . Q 8 HOH B 80 980 159 HOH HOH . Q 8 HOH B 81 981 67 HOH HOH . Q 8 HOH B 82 982 121 HOH HOH . Q 8 HOH B 83 983 64 HOH HOH . Q 8 HOH B 84 984 128 HOH HOH . Q 8 HOH B 85 985 40 HOH HOH . Q 8 HOH B 86 986 170 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . N 6 9.955 52.352 33.221 1 31.66 ? C ACT 805 B 1 HETATM 2 O O ACT . . . N 6 9.915 52.942 32.12 1 33.56 ? O ACT 805 B 1 HETATM 3 O OXT ACT . . . N 6 9.006 51.678 33.699 1 34.46 ? OXT ACT 805 B 1 HETATM 4 C CH3 ACT . . . N 6 11.225 52.452 34.014 1 28.7 ? CH3 ACT 805 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #