data_6JX1
#
_model_server_result.job_id            2tAMzQnwOsRcAY8NYRhwoQ 
_model_server_result.datetime_utc      '2025-07-16 17:31:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jx1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    6JX1 
#
_exptl.entry_id    6JX1 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          121.37 
_cell.angle_gamma         90 
_cell.entry_id            6JX1 
_cell.length_a            141.496 
_cell.length_b            53.91 
_cell.length_c            117.063 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JX1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6JX1 
_atom_sites.fract_transf_matrix[1][1]    0.007067 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004309 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018549 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010005 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GOL A 1 501 400 GOL GOL . 
D 3 HOH A 1 601 169 HOH HOH . 
D 3 HOH A 2 602 24 HOH HOH . 
D 3 HOH A 3 603 47 HOH HOH . 
D 3 HOH A 4 604 34 HOH HOH . 
D 3 HOH A 5 605 52 HOH HOH . 
D 3 HOH A 6 606 3 HOH HOH . 
D 3 HOH A 7 607 86 HOH HOH . 
D 3 HOH A 8 608 162 HOH HOH . 
D 3 HOH A 9 609 53 HOH HOH . 
D 3 HOH A 10 610 49 HOH HOH . 
D 3 HOH A 11 611 1 HOH HOH . 
D 3 HOH A 12 612 78 HOH HOH . 
D 3 HOH A 13 613 21 HOH HOH . 
D 3 HOH A 14 614 33 HOH HOH . 
D 3 HOH A 15 615 37 HOH HOH . 
D 3 HOH A 16 616 88 HOH HOH . 
D 3 HOH A 17 617 135 HOH HOH . 
D 3 HOH A 18 618 19 HOH HOH . 
D 3 HOH A 19 619 90 HOH HOH . 
D 3 HOH A 20 620 11 HOH HOH . 
D 3 HOH A 21 621 8 HOH HOH . 
D 3 HOH A 22 622 100 HOH HOH . 
D 3 HOH A 23 623 12 HOH HOH . 
D 3 HOH A 24 624 4 HOH HOH . 
D 3 HOH A 25 625 67 HOH HOH . 
D 3 HOH A 26 626 35 HOH HOH . 
D 3 HOH A 27 627 22 HOH HOH . 
D 3 HOH A 28 628 7 HOH HOH . 
D 3 HOH A 29 629 51 HOH HOH . 
D 3 HOH A 30 630 200 HOH HOH . 
D 3 HOH A 31 631 28 HOH HOH . 
D 3 HOH A 32 632 158 HOH HOH . 
D 3 HOH A 33 633 149 HOH HOH . 
D 3 HOH A 34 634 6 HOH HOH . 
D 3 HOH A 35 635 32 HOH HOH . 
D 3 HOH A 36 636 155 HOH HOH . 
D 3 HOH A 37 637 71 HOH HOH . 
D 3 HOH A 38 638 144 HOH HOH . 
D 3 HOH A 39 639 163 HOH HOH . 
D 3 HOH A 40 640 94 HOH HOH . 
D 3 HOH A 41 641 40 HOH HOH . 
D 3 HOH A 42 642 142 HOH HOH . 
D 3 HOH A 43 643 102 HOH HOH . 
D 3 HOH A 44 644 2 HOH HOH . 
D 3 HOH A 45 645 123 HOH HOH . 
D 3 HOH A 46 646 136 HOH HOH . 
D 3 HOH A 47 647 26 HOH HOH . 
D 3 HOH A 48 648 36 HOH HOH . 
D 3 HOH A 49 649 185 HOH HOH . 
D 3 HOH A 50 650 23 HOH HOH . 
D 3 HOH A 51 651 17 HOH HOH . 
D 3 HOH A 52 652 69 HOH HOH . 
D 3 HOH A 53 653 180 HOH HOH . 
D 3 HOH A 54 654 85 HOH HOH . 
D 3 HOH A 55 655 48 HOH HOH . 
D 3 HOH A 56 656 39 HOH HOH . 
D 3 HOH A 57 657 83 HOH HOH . 
D 3 HOH A 58 658 171 HOH HOH . 
D 3 HOH A 59 659 128 HOH HOH . 
D 3 HOH A 60 660 25 HOH HOH . 
D 3 HOH A 61 661 148 HOH HOH . 
D 3 HOH A 62 662 76 HOH HOH . 
D 3 HOH A 63 663 81 HOH HOH . 
D 3 HOH A 64 664 74 HOH HOH . 
D 3 HOH A 65 665 131 HOH HOH . 
D 3 HOH A 66 666 44 HOH HOH . 
D 3 HOH A 67 667 116 HOH HOH . 
D 3 HOH A 68 668 77 HOH HOH . 
D 3 HOH A 69 669 50 HOH HOH . 
D 3 HOH A 70 670 30 HOH HOH . 
D 3 HOH A 71 671 27 HOH HOH . 
D 3 HOH A 72 672 196 HOH HOH . 
D 3 HOH A 73 673 195 HOH HOH . 
D 3 HOH A 74 674 79 HOH HOH . 
D 3 HOH A 75 675 134 HOH HOH . 
D 3 HOH A 76 676 54 HOH HOH . 
D 3 HOH A 77 677 154 HOH HOH . 
D 3 HOH A 78 678 63 HOH HOH . 
D 3 HOH A 79 679 175 HOH HOH . 
D 3 HOH A 80 680 75 HOH HOH . 
D 3 HOH A 81 681 14 HOH HOH . 
D 3 HOH A 82 682 80 HOH HOH . 
D 3 HOH A 83 683 181 HOH HOH . 
D 3 HOH A 84 684 147 HOH HOH . 
D 3 HOH A 85 685 106 HOH HOH . 
D 3 HOH A 86 686 122 HOH HOH . 
D 3 HOH A 87 687 152 HOH HOH . 
D 3 HOH A 88 688 114 HOH HOH . 
D 3 HOH A 89 689 188 HOH HOH . 
D 3 HOH A 90 690 125 HOH HOH . 
D 3 HOH A 91 691 156 HOH HOH . 
D 3 HOH A 92 692 140 HOH HOH . 
D 3 HOH A 93 693 198 HOH HOH . 
D 3 HOH A 94 694 192 HOH HOH . 
D 3 HOH A 95 695 161 HOH HOH . 
D 3 HOH A 96 696 183 HOH HOH . 
D 3 HOH A 97 697 194 HOH HOH . 
D 3 HOH A 98 698 137 HOH HOH . 
D 3 HOH A 99 699 193 HOH HOH . 
D 3 HOH A 100 700 150 HOH HOH . 
D 3 HOH A 101 701 165 HOH HOH . 
D 3 HOH A 102 702 70 HOH HOH . 
D 3 HOH A 103 703 170 HOH HOH . 
D 3 HOH A 104 704 108 HOH HOH . 
D 3 HOH A 105 705 117 HOH HOH . 
E 3 HOH B 1 501 97 HOH HOH . 
E 3 HOH B 2 502 16 HOH HOH . 
E 3 HOH B 3 503 129 HOH HOH . 
E 3 HOH B 4 504 62 HOH HOH . 
E 3 HOH B 5 505 99 HOH HOH . 
E 3 HOH B 6 506 72 HOH HOH . 
E 3 HOH B 7 507 141 HOH HOH . 
E 3 HOH B 8 508 177 HOH HOH . 
E 3 HOH B 9 509 145 HOH HOH . 
E 3 HOH B 10 510 133 HOH HOH . 
E 3 HOH B 11 511 189 HOH HOH . 
E 3 HOH B 12 512 115 HOH HOH . 
E 3 HOH B 13 513 10 HOH HOH . 
E 3 HOH B 14 514 43 HOH HOH . 
E 3 HOH B 15 515 120 HOH HOH . 
E 3 HOH B 16 516 73 HOH HOH . 
E 3 HOH B 17 517 45 HOH HOH . 
E 3 HOH B 18 518 104 HOH HOH . 
E 3 HOH B 19 519 93 HOH HOH . 
E 3 HOH B 20 520 82 HOH HOH . 
E 3 HOH B 21 521 38 HOH HOH . 
E 3 HOH B 22 522 9 HOH HOH . 
E 3 HOH B 23 523 18 HOH HOH . 
E 3 HOH B 24 524 65 HOH HOH . 
E 3 HOH B 25 525 55 HOH HOH . 
E 3 HOH B 26 526 41 HOH HOH . 
E 3 HOH B 27 527 139 HOH HOH . 
E 3 HOH B 28 528 143 HOH HOH . 
E 3 HOH B 29 529 60 HOH HOH . 
E 3 HOH B 30 530 42 HOH HOH . 
E 3 HOH B 31 531 201 HOH HOH . 
E 3 HOH B 32 532 110 HOH HOH . 
E 3 HOH B 33 533 20 HOH HOH . 
E 3 HOH B 34 534 101 HOH HOH . 
E 3 HOH B 35 535 130 HOH HOH . 
E 3 HOH B 36 536 68 HOH HOH . 
E 3 HOH B 37 537 164 HOH HOH . 
E 3 HOH B 38 538 168 HOH HOH . 
E 3 HOH B 39 539 29 HOH HOH . 
E 3 HOH B 40 540 160 HOH HOH . 
E 3 HOH B 41 541 15 HOH HOH . 
E 3 HOH B 42 542 31 HOH HOH . 
E 3 HOH B 43 543 84 HOH HOH . 
E 3 HOH B 44 544 56 HOH HOH . 
E 3 HOH B 45 545 127 HOH HOH . 
E 3 HOH B 46 546 13 HOH HOH . 
E 3 HOH B 47 547 89 HOH HOH . 
E 3 HOH B 48 548 111 HOH HOH . 
E 3 HOH B 49 549 59 HOH HOH . 
E 3 HOH B 50 550 103 HOH HOH . 
E 3 HOH B 51 551 5 HOH HOH . 
E 3 HOH B 52 552 46 HOH HOH . 
E 3 HOH B 53 553 178 HOH HOH . 
E 3 HOH B 54 554 166 HOH HOH . 
E 3 HOH B 55 555 61 HOH HOH . 
E 3 HOH B 56 556 146 HOH HOH . 
E 3 HOH B 57 557 121 HOH HOH . 
E 3 HOH B 58 558 173 HOH HOH . 
E 3 HOH B 59 559 107 HOH HOH . 
E 3 HOH B 60 560 66 HOH HOH . 
E 3 HOH B 61 561 176 HOH HOH . 
E 3 HOH B 62 562 184 HOH HOH . 
E 3 HOH B 63 563 157 HOH HOH . 
E 3 HOH B 64 564 186 HOH HOH . 
E 3 HOH B 65 565 64 HOH HOH . 
E 3 HOH B 66 566 174 HOH HOH . 
E 3 HOH B 67 567 167 HOH HOH . 
E 3 HOH B 68 568 126 HOH HOH . 
E 3 HOH B 69 569 187 HOH HOH . 
E 3 HOH B 70 570 58 HOH HOH . 
E 3 HOH B 71 571 109 HOH HOH . 
E 3 HOH B 72 572 119 HOH HOH . 
E 3 HOH B 73 573 124 HOH HOH . 
E 3 HOH B 74 574 153 HOH HOH . 
E 3 HOH B 75 575 159 HOH HOH . 
E 3 HOH B 76 576 182 HOH HOH . 
E 3 HOH B 77 577 132 HOH HOH . 
E 3 HOH B 78 578 105 HOH HOH . 
E 3 HOH B 79 579 197 HOH HOH . 
E 3 HOH B 80 580 199 HOH HOH . 
E 3 HOH B 81 581 138 HOH HOH . 
E 3 HOH B 82 582 57 HOH HOH . 
E 3 HOH B 83 583 172 HOH HOH . 
E 3 HOH B 84 584 151 HOH HOH . 
E 3 HOH B 85 585 118 HOH HOH . 
E 3 HOH B 86 586 112 HOH HOH . 
E 3 HOH B 87 587 96 HOH HOH . 
E 3 HOH B 88 588 87 HOH HOH . 
E 3 HOH B 89 589 98 HOH HOH . 
E 3 HOH B 90 590 113 HOH HOH . 
E 3 HOH B 91 591 95 HOH HOH . 
E 3 HOH B 92 592 179 HOH HOH . 
E 3 HOH B 93 593 191 HOH HOH . 
E 3 HOH B 94 594 190 HOH HOH . 
E 3 HOH B 95 595 92 HOH HOH . 
E 3 HOH B 96 596 91 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . C 2 -23.236 10.425 -2.026 1 33.49 ? C1 GOL 501 A 1 
HETATM 2 O O1 GOL . . . C 2 -24.37 9.61 -2.103 1 28.73 ? O1 GOL 501 A 1 
HETATM 3 C C2 GOL . . . C 2 -22.059 9.522 -1.577 1 28.63 ? C2 GOL 501 A 1 
HETATM 4 O O2 GOL . . . C 2 -22.328 8.177 -1.789 1 28.47 ? O2 GOL 501 A 1 
HETATM 5 C C3 GOL . . . C 2 -20.832 10.022 -2.397 1 29.04 ? C3 GOL 501 A 1 
HETATM 6 O O3 GOL . . . C 2 -20.264 8.904 -3.02 1 23.07 ? O3 GOL 501 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           336 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#