data_6JYD # _model_server_result.job_id ngXfHW60fmpEZ_JFkpguCA _model_server_result.datetime_utc '2024-11-14 05:54:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jyd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6JYD # _exptl.entry_id 6JYD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.03 _cell.angle_gamma 90 _cell.entry_id 6JYD _cell.length_a 102.783 _cell.length_b 49.285 _cell.length_c 69.334 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JYD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 251 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 235 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C15 _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.351 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6JYD _atom_sites.fract_transf_matrix[1][1] 0.009729 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003547 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02029 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015351 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 301 301 RET RET . C 3 CL A 1 302 1 CL CL . D 3 CL A 1 303 2 CL CL . E 4 OLA A 1 304 1 OLA OLA . F 4 OLA A 1 305 2 OLA OLA . G 4 OLA A 1 306 3 OLA OLA . H 4 OLA A 1 307 4 OLA OLA . I 4 OLA A 1 308 5 OLA OLA . J 4 OLA A 1 309 6 OLA OLA . K 4 OLA A 1 310 7 OLA OLA . L 4 OLA A 1 311 8 OLA OLA . M 4 OLA A 1 312 9 OLA OLA . N 4 OLA A 1 313 10 OLA OLA . O 4 OLA A 1 314 11 OLA OLA . P 5 HOH A 1 401 1 HOH HOH . P 5 HOH A 2 402 43 HOH HOH . P 5 HOH A 3 403 21 HOH HOH . P 5 HOH A 4 404 5 HOH HOH . P 5 HOH A 5 405 47 HOH HOH . P 5 HOH A 6 406 4 HOH HOH . P 5 HOH A 7 407 75 HOH HOH . P 5 HOH A 8 408 29 HOH HOH . P 5 HOH A 9 409 27 HOH HOH . P 5 HOH A 10 410 57 HOH HOH . P 5 HOH A 11 411 23 HOH HOH . P 5 HOH A 12 412 31 HOH HOH . P 5 HOH A 13 413 42 HOH HOH . P 5 HOH A 14 414 24 HOH HOH . P 5 HOH A 15 415 37 HOH HOH . P 5 HOH A 16 416 59 HOH HOH . P 5 HOH A 17 417 79 HOH HOH . P 5 HOH A 18 418 69 HOH HOH . P 5 HOH A 19 419 26 HOH HOH . P 5 HOH A 20 420 7 HOH HOH . P 5 HOH A 21 421 13 HOH HOH . P 5 HOH A 22 422 20 HOH HOH . P 5 HOH A 23 423 32 HOH HOH . P 5 HOH A 24 424 76 HOH HOH . P 5 HOH A 25 425 60 HOH HOH . P 5 HOH A 26 426 14 HOH HOH . P 5 HOH A 27 427 9 HOH HOH . P 5 HOH A 28 428 34 HOH HOH . P 5 HOH A 29 429 63 HOH HOH . P 5 HOH A 30 430 25 HOH HOH . P 5 HOH A 31 431 74 HOH HOH . P 5 HOH A 32 432 36 HOH HOH . P 5 HOH A 33 433 78 HOH HOH . P 5 HOH A 34 434 55 HOH HOH . P 5 HOH A 35 435 10 HOH HOH . P 5 HOH A 36 436 46 HOH HOH . P 5 HOH A 37 437 6 HOH HOH . P 5 HOH A 38 438 22 HOH HOH . P 5 HOH A 39 439 19 HOH HOH . P 5 HOH A 40 440 3 HOH HOH . P 5 HOH A 41 441 52 HOH HOH . P 5 HOH A 42 442 12 HOH HOH . P 5 HOH A 43 443 28 HOH HOH . P 5 HOH A 44 444 2 HOH HOH . P 5 HOH A 45 445 40 HOH HOH . P 5 HOH A 46 446 41 HOH HOH . P 5 HOH A 47 447 62 HOH HOH . P 5 HOH A 48 448 61 HOH HOH . P 5 HOH A 49 449 18 HOH HOH . P 5 HOH A 50 450 65 HOH HOH . P 5 HOH A 51 451 70 HOH HOH . P 5 HOH A 52 452 39 HOH HOH . P 5 HOH A 53 453 16 HOH HOH . P 5 HOH A 54 454 87 HOH HOH . P 5 HOH A 55 455 72 HOH HOH . P 5 HOH A 56 456 44 HOH HOH . P 5 HOH A 57 457 68 HOH HOH . P 5 HOH A 58 458 45 HOH HOH . P 5 HOH A 59 459 49 HOH HOH . P 5 HOH A 60 460 67 HOH HOH . P 5 HOH A 61 461 15 HOH HOH . P 5 HOH A 62 462 33 HOH HOH . P 5 HOH A 63 463 77 HOH HOH . P 5 HOH A 64 464 17 HOH HOH . P 5 HOH A 65 465 11 HOH HOH . P 5 HOH A 66 466 50 HOH HOH . P 5 HOH A 67 467 85 HOH HOH . P 5 HOH A 68 468 66 HOH HOH . P 5 HOH A 69 469 8 HOH HOH . P 5 HOH A 70 470 30 HOH HOH . P 5 HOH A 71 471 56 HOH HOH . P 5 HOH A 72 472 53 HOH HOH . P 5 HOH A 73 473 64 HOH HOH . P 5 HOH A 74 474 84 HOH HOH . P 5 HOH A 75 475 88 HOH HOH . P 5 HOH A 76 476 35 HOH HOH . P 5 HOH A 77 477 73 HOH HOH . P 5 HOH A 78 478 58 HOH HOH . P 5 HOH A 79 479 48 HOH HOH . P 5 HOH A 80 480 80 HOH HOH . P 5 HOH A 81 481 83 HOH HOH . P 5 HOH A 82 482 54 HOH HOH . P 5 HOH A 83 483 51 HOH HOH . P 5 HOH A 84 484 38 HOH HOH . P 5 HOH A 85 485 82 HOH HOH . P 5 HOH A 86 486 71 HOH HOH . P 5 HOH A 87 487 86 HOH HOH . P 5 HOH A 88 488 81 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -10.659 _atom_site.Cartn_y -23.006 _atom_site.Cartn_z 3.266 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #