data_6JYD # _model_server_result.job_id -Ukv3aQpbHbaCKk81zgU4Q _model_server_result.datetime_utc '2024-11-26 16:12:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jyd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 6JYD # _exptl.entry_id 6JYD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 4 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.03 _cell.angle_gamma 90 _cell.entry_id 6JYD _cell.length_a 102.783 _cell.length_b 49.285 _cell.length_c 69.334 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JYD _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NZ _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 251 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 235 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C15 _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 301 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.351 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 237 n n C1 O2 OLA sing 238 n n C1 C2 OLA sing 239 n n O2 HO2 OLA sing 240 n n C2 C3 OLA sing 241 n n C2 H21 OLA sing 242 n n C2 H22 OLA sing 243 n n C3 C4 OLA sing 244 n n C3 H31 OLA sing 245 n n C3 H32 OLA sing 246 n n C4 C5 OLA sing 247 n n C4 H41 OLA sing 248 n n C4 H42 OLA sing 249 n n C5 C6 OLA sing 250 n n C5 H51 OLA sing 251 n n C5 H52 OLA sing 252 n n C6 C7 OLA sing 253 n n C6 H61 OLA sing 254 n n C6 H62 OLA sing 255 n n C7 C8 OLA sing 256 n n C7 H71 OLA sing 257 n n C7 H72 OLA sing 258 n n C8 C9 OLA sing 259 n n C8 H81 OLA sing 260 n n C8 H82 OLA sing 261 n n C9 C10 OLA doub 262 z n C9 H9 OLA sing 263 n n C10 C11 OLA sing 264 n n C10 H10 OLA sing 265 n n C11 C12 OLA sing 266 n n C11 H111 OLA sing 267 n n C11 H112 OLA sing 268 n n C12 C13 OLA sing 269 n n C12 H121 OLA sing 270 n n C12 H122 OLA sing 271 n n C13 C14 OLA sing 272 n n C13 H131 OLA sing 273 n n C13 H132 OLA sing 274 n n C14 C15 OLA sing 275 n n C14 H141 OLA sing 276 n n C14 H142 OLA sing 277 n n C15 C16 OLA sing 278 n n C15 H151 OLA sing 279 n n C15 H152 OLA sing 280 n n C16 C17 OLA sing 281 n n C16 H161 OLA sing 282 n n C16 H162 OLA sing 283 n n C17 C18 OLA sing 284 n n C17 H171 OLA sing 285 n n C17 H172 OLA sing 286 n n C18 H181 OLA sing 287 n n C18 H182 OLA sing 288 n n C18 H183 OLA sing 289 n n # _atom_sites.entry_id 6JYD _atom_sites.fract_transf_matrix[1][1] 0.009729 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003547 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02029 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015351 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 RET A 1 301 301 RET RET . C 3 CL A 1 302 1 CL CL . D 3 CL A 1 303 2 CL CL . E 4 OLA A 1 304 1 OLA OLA . F 4 OLA A 1 305 2 OLA OLA . G 4 OLA A 1 306 3 OLA OLA . H 4 OLA A 1 307 4 OLA OLA . I 4 OLA A 1 308 5 OLA OLA . J 4 OLA A 1 309 6 OLA OLA . K 4 OLA A 1 310 7 OLA OLA . L 4 OLA A 1 311 8 OLA OLA . M 4 OLA A 1 312 9 OLA OLA . N 4 OLA A 1 313 10 OLA OLA . O 4 OLA A 1 314 11 OLA OLA . P 5 HOH A 1 401 1 HOH HOH . P 5 HOH A 2 402 43 HOH HOH . P 5 HOH A 3 403 21 HOH HOH . P 5 HOH A 4 404 5 HOH HOH . P 5 HOH A 5 405 47 HOH HOH . P 5 HOH A 6 406 4 HOH HOH . P 5 HOH A 7 407 75 HOH HOH . P 5 HOH A 8 408 29 HOH HOH . P 5 HOH A 9 409 27 HOH HOH . P 5 HOH A 10 410 57 HOH HOH . P 5 HOH A 11 411 23 HOH HOH . P 5 HOH A 12 412 31 HOH HOH . P 5 HOH A 13 413 42 HOH HOH . P 5 HOH A 14 414 24 HOH HOH . P 5 HOH A 15 415 37 HOH HOH . P 5 HOH A 16 416 59 HOH HOH . P 5 HOH A 17 417 79 HOH HOH . P 5 HOH A 18 418 69 HOH HOH . P 5 HOH A 19 419 26 HOH HOH . P 5 HOH A 20 420 7 HOH HOH . P 5 HOH A 21 421 13 HOH HOH . P 5 HOH A 22 422 20 HOH HOH . P 5 HOH A 23 423 32 HOH HOH . P 5 HOH A 24 424 76 HOH HOH . P 5 HOH A 25 425 60 HOH HOH . P 5 HOH A 26 426 14 HOH HOH . P 5 HOH A 27 427 9 HOH HOH . P 5 HOH A 28 428 34 HOH HOH . P 5 HOH A 29 429 63 HOH HOH . P 5 HOH A 30 430 25 HOH HOH . P 5 HOH A 31 431 74 HOH HOH . P 5 HOH A 32 432 36 HOH HOH . P 5 HOH A 33 433 78 HOH HOH . P 5 HOH A 34 434 55 HOH HOH . P 5 HOH A 35 435 10 HOH HOH . P 5 HOH A 36 436 46 HOH HOH . P 5 HOH A 37 437 6 HOH HOH . P 5 HOH A 38 438 22 HOH HOH . P 5 HOH A 39 439 19 HOH HOH . P 5 HOH A 40 440 3 HOH HOH . P 5 HOH A 41 441 52 HOH HOH . P 5 HOH A 42 442 12 HOH HOH . P 5 HOH A 43 443 28 HOH HOH . P 5 HOH A 44 444 2 HOH HOH . P 5 HOH A 45 445 40 HOH HOH . P 5 HOH A 46 446 41 HOH HOH . P 5 HOH A 47 447 62 HOH HOH . P 5 HOH A 48 448 61 HOH HOH . P 5 HOH A 49 449 18 HOH HOH . P 5 HOH A 50 450 65 HOH HOH . P 5 HOH A 51 451 70 HOH HOH . P 5 HOH A 52 452 39 HOH HOH . P 5 HOH A 53 453 16 HOH HOH . P 5 HOH A 54 454 87 HOH HOH . P 5 HOH A 55 455 72 HOH HOH . P 5 HOH A 56 456 44 HOH HOH . P 5 HOH A 57 457 68 HOH HOH . P 5 HOH A 58 458 45 HOH HOH . P 5 HOH A 59 459 49 HOH HOH . P 5 HOH A 60 460 67 HOH HOH . P 5 HOH A 61 461 15 HOH HOH . P 5 HOH A 62 462 33 HOH HOH . P 5 HOH A 63 463 77 HOH HOH . P 5 HOH A 64 464 17 HOH HOH . P 5 HOH A 65 465 11 HOH HOH . P 5 HOH A 66 466 50 HOH HOH . P 5 HOH A 67 467 85 HOH HOH . P 5 HOH A 68 468 66 HOH HOH . P 5 HOH A 69 469 8 HOH HOH . P 5 HOH A 70 470 30 HOH HOH . P 5 HOH A 71 471 56 HOH HOH . P 5 HOH A 72 472 53 HOH HOH . P 5 HOH A 73 473 64 HOH HOH . P 5 HOH A 74 474 84 HOH HOH . P 5 HOH A 75 475 88 HOH HOH . P 5 HOH A 76 476 35 HOH HOH . P 5 HOH A 77 477 73 HOH HOH . P 5 HOH A 78 478 58 HOH HOH . P 5 HOH A 79 479 48 HOH HOH . P 5 HOH A 80 480 80 HOH HOH . P 5 HOH A 81 481 83 HOH HOH . P 5 HOH A 82 482 54 HOH HOH . P 5 HOH A 83 483 51 HOH HOH . P 5 HOH A 84 484 38 HOH HOH . P 5 HOH A 85 485 82 HOH HOH . P 5 HOH A 86 486 71 HOH HOH . P 5 HOH A 87 487 86 HOH HOH . P 5 HOH A 88 488 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . F 4 -25.094 -37.39 16.15 1 64.96 ? C1 OLA 305 A 1 HETATM 2 O O1 OLA . . . F 4 -24.71 -38.434 16.721 1 60.81 ? O1 OLA 305 A 1 HETATM 3 O O2 OLA . . . F 4 -24.642 -36.292 16.538 1 43.22 ? O2 OLA 305 A 1 HETATM 4 C C2 OLA . . . F 4 -26.101 -37.446 15.022 1 45.96 ? C2 OLA 305 A 1 HETATM 5 C C3 OLA . . . F 4 -25.767 -38.579 14.06 1 38.12 ? C3 OLA 305 A 1 HETATM 6 C C4 OLA . . . F 4 -25.573 -38.056 12.639 1 36.39 ? C4 OLA 305 A 1 HETATM 7 C C5 OLA . . . F 4 -25.73 -39.177 11.616 1 40.81 ? C5 OLA 305 A 1 HETATM 8 C C6 OLA . . . F 4 -24.679 -39.074 10.519 1 39.76 ? C6 OLA 305 A 1 HETATM 9 C C7 OLA . . . F 4 -25.283 -38.583 9.211 1 18.17 ? C7 OLA 305 A 1 HETATM 10 C C8 OLA . . . F 4 -24.301 -38.75 8.055 1 41.8 ? C8 OLA 305 A 1 HETATM 11 C C9 OLA . . . F 4 -23.406 -37.534 7.995 1 106.84 ? C9 OLA 305 A 1 HETATM 12 C C10 OLA . . . F 4 -22.549 -37.271 6.828 1 54.11 ? C10 OLA 305 A 1 HETATM 13 C C11 OLA . . . F 4 -21.256 -38.017 6.605 1 35.71 ? C11 OLA 305 A 1 HETATM 14 C C12 OLA . . . F 4 -20.676 -37.621 5.249 1 58.46 ? C12 OLA 305 A 1 HETATM 15 C C13 OLA . . . F 4 -20.744 -36.112 5.035 1 26.35 ? C13 OLA 305 A 1 HETATM 16 C C14 OLA . . . F 4 -20.032 -35.681 3.755 1 44.75 ? C14 OLA 305 A 1 HETATM 17 C C15 OLA . . . F 4 -20.992 -35.58 2.577 1 35.82 ? C15 OLA 305 A 1 HETATM 18 C C16 OLA . . . F 4 -20.274 -35.09 1.323 1 42.58 ? C16 OLA 305 A 1 HETATM 19 C C17 OLA . . . F 4 -21.27 -34.556 0.299 1 49.14 ? C17 OLA 305 A 1 HETATM 20 C C18 OLA . . . F 4 -20.592 -34.212 -1.022 1 45.54 ? C18 OLA 305 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #