data_6JYQ # _model_server_result.job_id Oyv21WU4mGktqK7xsLKHKQ _model_server_result.datetime_utc '2024-11-16 03:44:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jyq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6JYQ # _exptl.entry_id 6JYQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 343.384 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-azanyl-5-(azepan-1-yl)-N-carbamimidoyl-6-(furan-2-yl)pyrazine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6JYQ _cell.length_a 121.121 _cell.length_b 121.121 _cell.length_c 42.071 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JYQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 U CYS 42 1_555 A SG CYS 47 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? disulf ? disulf2 A SG CYS 39 U CYS 50 1_555 A SG CYS 110 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.947 ? disulf ? disulf3 A SG CYS 135 U CYS 136 1_555 A SG CYS 204 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? disulf ? disulf4 A SG CYS 167 U CYS 168 1_555 A SG CYS 183 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf5 A SG CYS 194 U CYS 191 1_555 A SG CYS 222 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? # _chem_comp.formula 'C16 H21 N7 O2' _chem_comp.formula_weight 343.384 _chem_comp.id EAU _chem_comp.mon_nstd_flag . _chem_comp.name 3-azanyl-5-(azepan-1-yl)-N-carbamimidoyl-6-(furan-2-yl)pyrazine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 C3 EAU sing 83 n n O1 C6 EAU doub 84 n n C3 N1 EAU doub 85 n y C3 C4 EAU sing 86 n y N6 C13 EAU doub 87 n n C6 C4 EAU sing 88 n n C6 N5 EAU sing 89 n n N1 C2 EAU sing 90 n y C4 N2 EAU doub 91 n y C11 C12 EAU sing 92 n n C11 C10 EAU sing 93 n n C13 N5 EAU sing 94 n n C13 N7 EAU sing 95 n n C12 N4 EAU sing 96 n n C2 N4 EAU sing 97 n n C2 C1 EAU doub 98 n y N2 C1 EAU sing 99 n y N4 C7 EAU sing 100 n n C10 C9 EAU sing 101 n n C1 C5 EAU sing 102 n n C7 C8 EAU sing 103 n n C9 C8 EAU sing 104 n n C5 C14 EAU doub 105 n y C5 O2 EAU sing 106 n y C14 C15 EAU sing 107 n y O2 C16 EAU sing 108 n y C15 C16 EAU doub 109 n y N3 H1 EAU sing 110 n n N3 H2 EAU sing 111 n n N5 H3 EAU sing 112 n n C7 H4 EAU sing 113 n n C7 H5 EAU sing 114 n n C8 H6 EAU sing 115 n n C8 H7 EAU sing 116 n n C9 H8 EAU sing 117 n n C9 H9 EAU sing 118 n n C10 H10 EAU sing 119 n n C10 H11 EAU sing 120 n n N7 H12 EAU sing 121 n n N7 H13 EAU sing 122 n n N6 H14 EAU sing 123 n n C14 H15 EAU sing 124 n n C15 H16 EAU sing 125 n n C16 H17 EAU sing 126 n n C12 H18 EAU sing 127 n n C12 H19 EAU sing 128 n n C11 H20 EAU sing 129 n n C11 H21 EAU sing 130 n n # _atom_sites.entry_id 6JYQ _atom_sites.fract_transf_matrix[1][1] 0.008256 _atom_sites.fract_transf_matrix[1][2] 0.004767 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009533 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023769 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EAU U 1 301 301 EAU EAU . C 3 SO4 U 1 302 302 SO4 SO4 . D 4 HOH U 1 401 401 HOH HOH . D 4 HOH U 2 402 402 HOH HOH . D 4 HOH U 3 403 403 HOH HOH . D 4 HOH U 4 404 404 HOH HOH . D 4 HOH U 5 405 405 HOH HOH . D 4 HOH U 6 406 406 HOH HOH . D 4 HOH U 7 407 407 HOH HOH . D 4 HOH U 8 408 408 HOH HOH . D 4 HOH U 9 409 409 HOH HOH . D 4 HOH U 10 410 410 HOH HOH . D 4 HOH U 11 411 411 HOH HOH . D 4 HOH U 12 412 412 HOH HOH . D 4 HOH U 13 413 413 HOH HOH . D 4 HOH U 14 414 414 HOH HOH . D 4 HOH U 15 415 415 HOH HOH . D 4 HOH U 16 416 416 HOH HOH . D 4 HOH U 17 417 417 HOH HOH . D 4 HOH U 18 418 418 HOH HOH . D 4 HOH U 19 419 419 HOH HOH . D 4 HOH U 20 420 420 HOH HOH . D 4 HOH U 21 421 421 HOH HOH . D 4 HOH U 22 422 422 HOH HOH . D 4 HOH U 23 423 423 HOH HOH . D 4 HOH U 24 424 424 HOH HOH . D 4 HOH U 25 425 425 HOH HOH . D 4 HOH U 26 426 426 HOH HOH . D 4 HOH U 27 427 427 HOH HOH . D 4 HOH U 28 428 428 HOH HOH . D 4 HOH U 29 429 429 HOH HOH . D 4 HOH U 30 430 431 HOH HOH . D 4 HOH U 31 431 432 HOH HOH . D 4 HOH U 32 432 433 HOH HOH . D 4 HOH U 33 433 434 HOH HOH . D 4 HOH U 34 434 435 HOH HOH . D 4 HOH U 35 435 436 HOH HOH . D 4 HOH U 36 436 437 HOH HOH . D 4 HOH U 37 437 438 HOH HOH . D 4 HOH U 38 438 439 HOH HOH . D 4 HOH U 39 439 440 HOH HOH . D 4 HOH U 40 440 441 HOH HOH . D 4 HOH U 41 441 442 HOH HOH . D 4 HOH U 42 442 443 HOH HOH . D 4 HOH U 43 443 444 HOH HOH . D 4 HOH U 44 444 445 HOH HOH . D 4 HOH U 45 445 446 HOH HOH . D 4 HOH U 46 446 447 HOH HOH . D 4 HOH U 47 447 448 HOH HOH . D 4 HOH U 48 448 449 HOH HOH . D 4 HOH U 49 449 450 HOH HOH . D 4 HOH U 50 450 451 HOH HOH . D 4 HOH U 51 451 453 HOH HOH . D 4 HOH U 52 452 454 HOH HOH . D 4 HOH U 53 453 455 HOH HOH . D 4 HOH U 54 454 456 HOH HOH . D 4 HOH U 55 455 457 HOH HOH . D 4 HOH U 56 456 458 HOH HOH . D 4 HOH U 57 457 459 HOH HOH . D 4 HOH U 58 458 460 HOH HOH . D 4 HOH U 59 459 461 HOH HOH . D 4 HOH U 60 460 462 HOH HOH . D 4 HOH U 61 461 463 HOH HOH . D 4 HOH U 62 462 464 HOH HOH . D 4 HOH U 63 463 465 HOH HOH . D 4 HOH U 64 464 466 HOH HOH . D 4 HOH U 65 465 467 HOH HOH . D 4 HOH U 66 466 468 HOH HOH . D 4 HOH U 67 467 469 HOH HOH . D 4 HOH U 68 468 470 HOH HOH . D 4 HOH U 69 469 471 HOH HOH . D 4 HOH U 70 470 472 HOH HOH . D 4 HOH U 71 471 473 HOH HOH . D 4 HOH U 72 472 474 HOH HOH . D 4 HOH U 73 473 475 HOH HOH . D 4 HOH U 74 474 476 HOH HOH . D 4 HOH U 75 475 477 HOH HOH . D 4 HOH U 76 476 478 HOH HOH . D 4 HOH U 77 477 452 HOH HOH . D 4 HOH U 78 478 479 HOH HOH . D 4 HOH U 79 479 480 HOH HOH . D 4 HOH U 80 480 481 HOH HOH . D 4 HOH U 81 481 482 HOH HOH . D 4 HOH U 82 482 483 HOH HOH . D 4 HOH U 83 483 484 HOH HOH . D 4 HOH U 84 484 485 HOH HOH . D 4 HOH U 85 485 486 HOH HOH . D 4 HOH U 86 486 487 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 EAU . . . B 2 1.01 -31.801 -10.841 1 34.06 ? N1 EAU 301 U 1 HETATM 2 C C2 EAU . . . B 2 0.767 -31.451 -12.138 1 36.88 ? C2 EAU 301 U 1 HETATM 3 O O2 EAU . . . B 2 0.65 -32.824 -15.534 1 39.76 ? O2 EAU 301 U 1 HETATM 4 N N3 EAU . . . B 2 1.077 -33.334 -9.065 1 34.36 ? N3 EAU 301 U 1 HETATM 5 C C4 EAU . . . B 2 0.375 -34.009 -11.26 1 34.5 ? C4 EAU 301 U 1 HETATM 6 N N5 EAU . . . B 2 0.043 -36.26 -11.928 1 33.85 ? N5 EAU 301 U 1 HETATM 7 C C6 EAU . . . B 2 0.155 -35.433 -10.888 1 34.42 ? C6 EAU 301 U 1 HETATM 8 C C7 EAU . . . B 2 1.141 -29.648 -13.884 1 41.4 ? C7 EAU 301 U 1 HETATM 9 C C8 EAU . . . B 2 2.089 -28.45 -13.998 1 43 ? C8 EAU 301 U 1 HETATM 10 C C9 EAU . . . B 2 3.518 -28.718 -13.52 1 42.97 ? C9 EAU 301 U 1 HETATM 11 C C10 EAU . . . B 2 3.652 -29.682 -12.346 1 44.28 ? C10 EAU 301 U 1 HETATM 12 O O1 EAU . . . B 2 0.182 -35.773 -9.719 1 33.52 ? O1 EAU 301 U 1 HETATM 13 C C13 EAU . . . B 2 -0.268 -37.55 -11.86 1 34.61 ? C13 EAU 301 U 1 HETATM 14 N N7 EAU . . . B 2 -0.306 -38.247 -12.994 1 33.13 ? N7 EAU 301 U 1 HETATM 15 N N6 EAU . . . B 2 -0.54 -38.134 -10.695 1 33.68 ? N6 EAU 301 U 1 HETATM 16 C C3 EAU . . . B 2 0.823 -33.05 -10.374 1 35.03 ? C3 EAU 301 U 1 HETATM 17 N N2 EAU . . . B 2 0.147 -33.689 -12.545 1 36.43 ? N2 EAU 301 U 1 HETATM 18 C C1 EAU . . . B 2 0.327 -32.447 -13.019 1 36.52 ? C1 EAU 301 U 1 HETATM 19 C C5 EAU . . . B 2 -0.016 -32.285 -14.459 1 36.91 ? C5 EAU 301 U 1 HETATM 20 C C14 EAU . . . B 2 -1.119 -31.609 -14.949 1 36.43 ? C14 EAU 301 U 1 HETATM 21 C C15 EAU . . . B 2 -1.108 -31.7 -16.322 1 37.63 ? C15 EAU 301 U 1 HETATM 22 C C16 EAU . . . B 2 -0.011 -32.45 -16.682 1 37.99 ? C16 EAU 301 U 1 HETATM 23 N N4 EAU . . . B 2 1.037 -30.109 -12.492 1 39.57 ? N4 EAU 301 U 1 HETATM 24 C C12 EAU . . . B 2 1.31 -29.18 -11.408 1 40.93 ? C12 EAU 301 U 1 HETATM 25 C C11 EAU . . . B 2 2.811 -29.266 -11.131 1 42.04 ? C11 EAU 301 U 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 1234 _model_server_stats.encode_time_ms 15 _model_server_stats.element_count 25 #