data_6JZP # _model_server_result.job_id FTUyPT9eAHjJ7hvEVX3dxw _model_server_result.datetime_utc '2024-11-29 19:03:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jzp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6JZP # _exptl.entry_id 6JZP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JZP _cell.length_a 48.236 _cell.length_b 59.513 _cell.length_c 70.189 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JZP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 6JZP _atom_sites.fract_transf_matrix[1][1] 0.020731 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016803 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014247 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 201 1 GOL GOL . C 3 IOD A 1 202 1 IOD IOD . D 3 IOD A 1 203 2 IOD IOD . E 3 IOD A 1 204 3 IOD IOD . F 4 HOH A 1 301 320 HOH HOH . F 4 HOH A 2 302 249 HOH HOH . F 4 HOH A 3 303 14 HOH HOH . F 4 HOH A 4 304 23 HOH HOH . F 4 HOH A 5 305 73 HOH HOH . F 4 HOH A 6 306 37 HOH HOH . F 4 HOH A 7 307 39 HOH HOH . F 4 HOH A 8 308 2 HOH HOH . F 4 HOH A 9 309 288 HOH HOH . F 4 HOH A 10 310 324 HOH HOH . F 4 HOH A 11 311 242 HOH HOH . F 4 HOH A 12 312 339 HOH HOH . F 4 HOH A 13 313 24 HOH HOH . F 4 HOH A 14 314 11 HOH HOH . F 4 HOH A 15 315 86 HOH HOH . F 4 HOH A 16 316 53 HOH HOH . F 4 HOH A 17 317 121 HOH HOH . F 4 HOH A 18 318 323 HOH HOH . F 4 HOH A 19 319 222 HOH HOH . F 4 HOH A 20 320 176 HOH HOH . F 4 HOH A 21 321 200 HOH HOH . F 4 HOH A 22 322 99 HOH HOH . F 4 HOH A 23 323 18 HOH HOH . F 4 HOH A 24 324 120 HOH HOH . F 4 HOH A 25 325 38 HOH HOH . F 4 HOH A 26 326 91 HOH HOH . F 4 HOH A 27 327 223 HOH HOH . F 4 HOH A 28 328 55 HOH HOH . F 4 HOH A 29 329 301 HOH HOH . F 4 HOH A 30 330 130 HOH HOH . F 4 HOH A 31 331 8 HOH HOH . F 4 HOH A 32 332 88 HOH HOH . F 4 HOH A 33 333 57 HOH HOH . F 4 HOH A 34 334 47 HOH HOH . F 4 HOH A 35 335 9 HOH HOH . F 4 HOH A 36 336 78 HOH HOH . F 4 HOH A 37 337 122 HOH HOH . F 4 HOH A 38 338 5 HOH HOH . F 4 HOH A 39 339 7 HOH HOH . F 4 HOH A 40 340 81 HOH HOH . F 4 HOH A 41 341 93 HOH HOH . F 4 HOH A 42 342 334 HOH HOH . F 4 HOH A 43 343 69 HOH HOH . F 4 HOH A 44 344 280 HOH HOH . F 4 HOH A 45 345 44 HOH HOH . F 4 HOH A 46 346 225 HOH HOH . F 4 HOH A 47 347 212 HOH HOH . F 4 HOH A 48 348 72 HOH HOH . F 4 HOH A 49 349 96 HOH HOH . F 4 HOH A 50 350 32 HOH HOH . F 4 HOH A 51 351 185 HOH HOH . F 4 HOH A 52 352 3 HOH HOH . F 4 HOH A 53 353 42 HOH HOH . F 4 HOH A 54 354 112 HOH HOH . F 4 HOH A 55 355 85 HOH HOH . F 4 HOH A 56 356 140 HOH HOH . F 4 HOH A 57 357 109 HOH HOH . F 4 HOH A 58 358 161 HOH HOH . F 4 HOH A 59 359 124 HOH HOH . F 4 HOH A 60 360 6 HOH HOH . F 4 HOH A 61 361 188 HOH HOH . F 4 HOH A 62 362 27 HOH HOH . F 4 HOH A 63 363 342 HOH HOH . F 4 HOH A 64 364 123 HOH HOH . F 4 HOH A 65 365 1 HOH HOH . F 4 HOH A 66 366 268 HOH HOH . F 4 HOH A 67 367 51 HOH HOH . F 4 HOH A 68 368 125 HOH HOH . F 4 HOH A 69 369 213 HOH HOH . F 4 HOH A 70 370 75 HOH HOH . F 4 HOH A 71 371 21 HOH HOH . F 4 HOH A 72 372 254 HOH HOH . F 4 HOH A 73 373 49 HOH HOH . F 4 HOH A 74 374 206 HOH HOH . F 4 HOH A 75 375 50 HOH HOH . F 4 HOH A 76 376 179 HOH HOH . F 4 HOH A 77 377 197 HOH HOH . F 4 HOH A 78 378 16 HOH HOH . F 4 HOH A 79 379 272 HOH HOH . F 4 HOH A 80 380 68 HOH HOH . F 4 HOH A 81 381 20 HOH HOH . F 4 HOH A 82 382 157 HOH HOH . F 4 HOH A 83 383 203 HOH HOH . F 4 HOH A 84 384 54 HOH HOH . F 4 HOH A 85 385 131 HOH HOH . F 4 HOH A 86 386 43 HOH HOH . F 4 HOH A 87 387 82 HOH HOH . F 4 HOH A 88 388 97 HOH HOH . F 4 HOH A 89 389 262 HOH HOH . F 4 HOH A 90 390 245 HOH HOH . F 4 HOH A 91 391 92 HOH HOH . F 4 HOH A 92 392 267 HOH HOH . F 4 HOH A 93 393 79 HOH HOH . F 4 HOH A 94 394 4 HOH HOH . F 4 HOH A 95 395 151 HOH HOH . F 4 HOH A 96 396 25 HOH HOH . F 4 HOH A 97 397 61 HOH HOH . F 4 HOH A 98 398 108 HOH HOH . F 4 HOH A 99 399 105 HOH HOH . F 4 HOH A 100 400 143 HOH HOH . F 4 HOH A 101 401 118 HOH HOH . F 4 HOH A 102 402 239 HOH HOH . F 4 HOH A 103 403 70 HOH HOH . F 4 HOH A 104 404 193 HOH HOH . F 4 HOH A 105 405 56 HOH HOH . F 4 HOH A 106 406 33 HOH HOH . F 4 HOH A 107 407 94 HOH HOH . F 4 HOH A 108 408 274 HOH HOH . F 4 HOH A 109 409 34 HOH HOH . F 4 HOH A 110 410 74 HOH HOH . F 4 HOH A 111 411 45 HOH HOH . F 4 HOH A 112 412 19 HOH HOH . F 4 HOH A 113 413 13 HOH HOH . F 4 HOH A 114 414 36 HOH HOH . F 4 HOH A 115 415 298 HOH HOH . F 4 HOH A 116 416 35 HOH HOH . F 4 HOH A 117 417 29 HOH HOH . F 4 HOH A 118 418 167 HOH HOH . F 4 HOH A 119 419 196 HOH HOH . F 4 HOH A 120 420 255 HOH HOH . F 4 HOH A 121 421 174 HOH HOH . F 4 HOH A 122 422 62 HOH HOH . F 4 HOH A 123 423 337 HOH HOH . F 4 HOH A 124 424 326 HOH HOH . F 4 HOH A 125 425 133 HOH HOH . F 4 HOH A 126 426 17 HOH HOH . F 4 HOH A 127 427 341 HOH HOH . F 4 HOH A 128 428 287 HOH HOH . F 4 HOH A 129 429 26 HOH HOH . F 4 HOH A 130 430 89 HOH HOH . F 4 HOH A 131 431 46 HOH HOH . F 4 HOH A 132 432 52 HOH HOH . F 4 HOH A 133 433 12 HOH HOH . F 4 HOH A 134 434 160 HOH HOH . F 4 HOH A 135 435 113 HOH HOH . F 4 HOH A 136 436 104 HOH HOH . F 4 HOH A 137 437 247 HOH HOH . F 4 HOH A 138 438 150 HOH HOH . F 4 HOH A 139 439 71 HOH HOH . F 4 HOH A 140 440 264 HOH HOH . F 4 HOH A 141 441 65 HOH HOH . F 4 HOH A 142 442 30 HOH HOH . F 4 HOH A 143 443 28 HOH HOH . F 4 HOH A 144 444 190 HOH HOH . F 4 HOH A 145 445 15 HOH HOH . F 4 HOH A 146 446 195 HOH HOH . F 4 HOH A 147 447 40 HOH HOH . F 4 HOH A 148 448 250 HOH HOH . F 4 HOH A 149 449 60 HOH HOH . F 4 HOH A 150 450 248 HOH HOH . F 4 HOH A 151 451 135 HOH HOH . F 4 HOH A 152 452 59 HOH HOH . F 4 HOH A 153 453 106 HOH HOH . F 4 HOH A 154 454 144 HOH HOH . F 4 HOH A 155 455 80 HOH HOH . F 4 HOH A 156 456 238 HOH HOH . F 4 HOH A 157 457 226 HOH HOH . F 4 HOH A 158 458 175 HOH HOH . F 4 HOH A 159 459 292 HOH HOH . F 4 HOH A 160 460 214 HOH HOH . F 4 HOH A 161 461 41 HOH HOH . F 4 HOH A 162 462 170 HOH HOH . F 4 HOH A 163 463 228 HOH HOH . F 4 HOH A 164 464 317 HOH HOH . F 4 HOH A 165 465 221 HOH HOH . F 4 HOH A 166 466 141 HOH HOH . F 4 HOH A 167 467 48 HOH HOH . F 4 HOH A 168 468 137 HOH HOH . F 4 HOH A 169 469 297 HOH HOH . F 4 HOH A 170 470 142 HOH HOH . F 4 HOH A 171 471 22 HOH HOH . F 4 HOH A 172 472 102 HOH HOH . F 4 HOH A 173 473 335 HOH HOH . F 4 HOH A 174 474 321 HOH HOH . F 4 HOH A 175 475 129 HOH HOH . F 4 HOH A 176 476 84 HOH HOH . F 4 HOH A 177 477 110 HOH HOH . F 4 HOH A 178 478 191 HOH HOH . F 4 HOH A 179 479 181 HOH HOH . F 4 HOH A 180 480 252 HOH HOH . F 4 HOH A 181 481 343 HOH HOH . F 4 HOH A 182 482 146 HOH HOH . F 4 HOH A 183 483 76 HOH HOH . F 4 HOH A 184 484 119 HOH HOH . F 4 HOH A 185 485 290 HOH HOH . F 4 HOH A 186 486 116 HOH HOH . F 4 HOH A 187 487 171 HOH HOH . F 4 HOH A 188 488 164 HOH HOH . F 4 HOH A 189 489 284 HOH HOH . F 4 HOH A 190 490 138 HOH HOH . F 4 HOH A 191 491 63 HOH HOH . F 4 HOH A 192 492 101 HOH HOH . F 4 HOH A 193 493 345 HOH HOH . F 4 HOH A 194 494 296 HOH HOH . F 4 HOH A 195 495 126 HOH HOH . F 4 HOH A 196 496 316 HOH HOH . F 4 HOH A 197 497 117 HOH HOH . F 4 HOH A 198 498 331 HOH HOH . F 4 HOH A 199 499 90 HOH HOH . F 4 HOH A 200 500 127 HOH HOH . F 4 HOH A 201 501 211 HOH HOH . F 4 HOH A 202 502 178 HOH HOH . F 4 HOH A 203 503 234 HOH HOH . F 4 HOH A 204 504 258 HOH HOH . F 4 HOH A 205 505 147 HOH HOH . F 4 HOH A 206 506 253 HOH HOH . F 4 HOH A 207 507 237 HOH HOH . F 4 HOH A 208 508 227 HOH HOH . F 4 HOH A 209 509 64 HOH HOH . F 4 HOH A 210 510 286 HOH HOH . F 4 HOH A 211 511 277 HOH HOH . F 4 HOH A 212 512 269 HOH HOH . F 4 HOH A 213 513 318 HOH HOH . F 4 HOH A 214 514 134 HOH HOH . F 4 HOH A 215 515 98 HOH HOH . F 4 HOH A 216 516 235 HOH HOH . F 4 HOH A 217 517 308 HOH HOH . F 4 HOH A 218 518 276 HOH HOH . F 4 HOH A 219 519 293 HOH HOH . F 4 HOH A 220 520 216 HOH HOH . F 4 HOH A 221 521 199 HOH HOH . F 4 HOH A 222 522 115 HOH HOH . F 4 HOH A 223 523 295 HOH HOH . F 4 HOH A 224 524 166 HOH HOH . F 4 HOH A 225 525 261 HOH HOH . F 4 HOH A 226 526 344 HOH HOH . F 4 HOH A 227 527 338 HOH HOH . F 4 HOH A 228 528 136 HOH HOH . F 4 HOH A 229 529 299 HOH HOH . F 4 HOH A 230 530 275 HOH HOH . F 4 HOH A 231 531 244 HOH HOH . F 4 HOH A 232 532 314 HOH HOH . F 4 HOH A 233 533 289 HOH HOH . F 4 HOH A 234 534 322 HOH HOH . F 4 HOH A 235 535 241 HOH HOH . F 4 HOH A 236 536 333 HOH HOH . F 4 HOH A 237 537 173 HOH HOH . F 4 HOH A 238 538 231 HOH HOH . F 4 HOH A 239 539 177 HOH HOH . F 4 HOH A 240 540 336 HOH HOH . F 4 HOH A 241 541 114 HOH HOH . F 4 HOH A 242 542 325 HOH HOH . F 4 HOH A 243 543 155 HOH HOH . F 4 HOH A 244 544 246 HOH HOH . F 4 HOH A 245 545 311 HOH HOH . F 4 HOH A 246 546 168 HOH HOH . F 4 HOH A 247 547 165 HOH HOH . F 4 HOH A 248 548 67 HOH HOH . F 4 HOH A 249 549 313 HOH HOH . F 4 HOH A 250 550 83 HOH HOH . F 4 HOH A 251 551 205 HOH HOH . F 4 HOH A 252 552 202 HOH HOH . F 4 HOH A 253 553 100 HOH HOH . F 4 HOH A 254 554 259 HOH HOH . F 4 HOH A 255 555 219 HOH HOH . F 4 HOH A 256 556 107 HOH HOH . F 4 HOH A 257 557 139 HOH HOH . F 4 HOH A 258 558 229 HOH HOH . F 4 HOH A 259 559 111 HOH HOH . F 4 HOH A 260 560 306 HOH HOH . F 4 HOH A 261 561 66 HOH HOH . F 4 HOH A 262 562 310 HOH HOH . F 4 HOH A 263 563 281 HOH HOH . F 4 HOH A 264 564 208 HOH HOH . F 4 HOH A 265 565 187 HOH HOH . F 4 HOH A 266 566 152 HOH HOH . F 4 HOH A 267 567 230 HOH HOH . F 4 HOH A 268 568 346 HOH HOH . F 4 HOH A 269 569 156 HOH HOH . F 4 HOH A 270 570 285 HOH HOH . F 4 HOH A 271 571 251 HOH HOH . F 4 HOH A 272 572 347 HOH HOH . F 4 HOH A 273 573 163 HOH HOH . F 4 HOH A 274 574 132 HOH HOH . F 4 HOH A 275 575 210 HOH HOH . F 4 HOH A 276 576 218 HOH HOH . F 4 HOH A 277 577 224 HOH HOH . F 4 HOH A 278 578 332 HOH HOH . F 4 HOH A 279 579 184 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 25.005 48.614 -9.918 1 22.51 ? C1 GOL 201 A 1 HETATM 2 O O1 GOL . . . B 2 23.939 47.921 -9.592 1 20.43 ? O1 GOL 201 A 1 HETATM 3 C C2 GOL . . . B 2 25.532 49.566 -8.827 1 28.19 ? C2 GOL 201 A 1 HETATM 4 O O2 GOL . . . B 2 24.54 49.98 -7.951 1 31.22 ? O2 GOL 201 A 1 HETATM 5 C C3 GOL . . . B 2 26.674 48.798 -8.127 1 38.59 ? C3 GOL 201 A 1 HETATM 6 O O3 GOL . . . B 2 27.506 48.327 -9.132 1 60.39 ? O3 GOL 201 A 1 HETATM 7 H HO1 GOL . . . B 2 23.131 48.629 -9.448 1 24.52 ? HO1 GOL 201 A 1 HETATM 8 H H2 GOL . . . B 2 25.943 50.433 -9.331 1 33.83 ? H2 GOL 201 A 1 HETATM 9 H HO2 GOL . . . B 2 24.154 49.199 -7.502 1 37.47 ? HO2 GOL 201 A 1 HETATM 10 H H31 GOL . . . B 2 26.272 47.967 -7.547 1 46.3 ? H31 GOL 201 A 1 HETATM 11 H H32 GOL . . . B 2 27.222 49.461 -7.458 1 46.3 ? H32 GOL 201 A 1 HETATM 12 H HO3 GOL . . . B 2 27.619 49.024 -9.812 1 72.47 ? HO3 GOL 201 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 12 #