data_6K0J # _model_server_result.job_id rTK9bF7-30ZhMkEznDOuvw _model_server_result.datetime_utc '2025-02-05 10:46:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6k0j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 6K0J # _exptl.entry_id 6K0J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 328.429 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(2,7-dimethoxyacridin-9-yl)sulfanylpropan-1-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6K0J _cell.length_a 64.487 _cell.length_b 129.127 _cell.length_c 132.895 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6K0J _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 170 A THR 381 1_555 A N PTR 171 A PTR 382 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C PTR 171 A PTR 382 1_555 A N ILE 172 A ILE 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C SER 246 A SER 457 1_555 A N SEP 247 A SEP 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale4 A C SEP 247 A SEP 458 1_555 A N LYS 248 A LYS 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C18 H20 N2 O2 S' _chem_comp.formula_weight 328.429 _chem_comp.id CQO _chem_comp.mon_nstd_flag . _chem_comp.name 3-(2,7-dimethoxyacridin-9-yl)sulfanylpropan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 O21 CQO sing 70 n n O21 C12 CQO sing 71 n n C13 C12 CQO doub 72 n y C13 C14 CQO sing 73 n y N19 C18 CQO sing 74 n n C12 C11 CQO sing 75 n y C14 C03 CQO doub 76 n y C18 C17 CQO sing 77 n n C11 C02 CQO doub 78 n y C03 C02 CQO sing 79 n y C03 N04 CQO sing 80 n y C02 C01 CQO sing 81 n y N04 C05 CQO doub 82 n y C17 C16 CQO sing 83 n n C01 C06 CQO doub 84 n y C01 S15 CQO sing 85 n n C05 C06 CQO sing 86 n y C05 C07 CQO sing 87 n y C16 S15 CQO sing 88 n n C06 C10 CQO sing 89 n y C07 C08 CQO doub 90 n y C10 C09 CQO doub 91 n y C08 C09 CQO sing 92 n y C09 O20 CQO sing 93 n n O20 C23 CQO sing 94 n n C10 H1 CQO sing 95 n n C13 H2 CQO sing 96 n n C17 H3 CQO sing 97 n n C17 H4 CQO sing 98 n n C22 H5 CQO sing 99 n n C22 H6 CQO sing 100 n n C22 H7 CQO sing 101 n n C07 H8 CQO sing 102 n n C08 H9 CQO sing 103 n n C11 H10 CQO sing 104 n n C14 H11 CQO sing 105 n n C16 H12 CQO sing 106 n n C16 H13 CQO sing 107 n n C18 H14 CQO sing 108 n n C18 H15 CQO sing 109 n n C23 H16 CQO sing 110 n n C23 H17 CQO sing 111 n n C23 H18 CQO sing 112 n n N19 H19 CQO sing 113 n n N19 H20 CQO sing 114 n n # _atom_sites.entry_id 6K0J _atom_sites.fract_transf_matrix[1][1] 0.015507 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CQO A 1 601 70 CQO LIG . C 3 HOH A 1 701 166 HOH HOH . C 3 HOH A 2 702 48 HOH HOH . C 3 HOH A 3 703 109 HOH HOH . C 3 HOH A 4 704 65 HOH HOH . C 3 HOH A 5 705 64 HOH HOH . C 3 HOH A 6 706 77 HOH HOH . C 3 HOH A 7 707 128 HOH HOH . C 3 HOH A 8 708 5 HOH HOH . C 3 HOH A 9 709 138 HOH HOH . C 3 HOH A 10 710 171 HOH HOH . C 3 HOH A 11 711 9 HOH HOH . C 3 HOH A 12 712 51 HOH HOH . C 3 HOH A 13 713 12 HOH HOH . C 3 HOH A 14 714 93 HOH HOH . C 3 HOH A 15 715 10 HOH HOH . C 3 HOH A 16 716 53 HOH HOH . C 3 HOH A 17 717 83 HOH HOH . C 3 HOH A 18 718 31 HOH HOH . C 3 HOH A 19 719 17 HOH HOH . C 3 HOH A 20 720 39 HOH HOH . C 3 HOH A 21 721 112 HOH HOH . C 3 HOH A 22 722 81 HOH HOH . C 3 HOH A 23 723 86 HOH HOH . C 3 HOH A 24 724 1 HOH HOH . C 3 HOH A 25 725 98 HOH HOH . C 3 HOH A 26 726 6 HOH HOH . C 3 HOH A 27 727 2 HOH HOH . C 3 HOH A 28 728 30 HOH HOH . C 3 HOH A 29 729 38 HOH HOH . C 3 HOH A 30 730 22 HOH HOH . C 3 HOH A 31 731 59 HOH HOH . C 3 HOH A 32 732 85 HOH HOH . C 3 HOH A 33 733 20 HOH HOH . C 3 HOH A 34 734 132 HOH HOH . C 3 HOH A 35 735 76 HOH HOH . C 3 HOH A 36 736 69 HOH HOH . C 3 HOH A 37 737 130 HOH HOH . C 3 HOH A 38 738 26 HOH HOH . C 3 HOH A 39 739 151 HOH HOH . C 3 HOH A 40 740 41 HOH HOH . C 3 HOH A 41 741 179 HOH HOH . C 3 HOH A 42 742 174 HOH HOH . C 3 HOH A 43 743 54 HOH HOH . C 3 HOH A 44 744 47 HOH HOH . C 3 HOH A 45 745 42 HOH HOH . C 3 HOH A 46 746 28 HOH HOH . C 3 HOH A 47 747 163 HOH HOH . C 3 HOH A 48 748 173 HOH HOH . C 3 HOH A 49 749 62 HOH HOH . C 3 HOH A 50 750 21 HOH HOH . C 3 HOH A 51 751 55 HOH HOH . C 3 HOH A 52 752 105 HOH HOH . C 3 HOH A 53 753 58 HOH HOH . C 3 HOH A 54 754 56 HOH HOH . C 3 HOH A 55 755 19 HOH HOH . C 3 HOH A 56 756 107 HOH HOH . C 3 HOH A 57 757 116 HOH HOH . C 3 HOH A 58 758 7 HOH HOH . C 3 HOH A 59 759 165 HOH HOH . C 3 HOH A 60 760 118 HOH HOH . C 3 HOH A 61 761 4 HOH HOH . C 3 HOH A 62 762 32 HOH HOH . C 3 HOH A 63 763 71 HOH HOH . C 3 HOH A 64 764 103 HOH HOH . C 3 HOH A 65 765 82 HOH HOH . C 3 HOH A 66 766 78 HOH HOH . C 3 HOH A 67 767 115 HOH HOH . C 3 HOH A 68 768 11 HOH HOH . C 3 HOH A 69 769 8 HOH HOH . C 3 HOH A 70 770 178 HOH HOH . C 3 HOH A 71 771 3 HOH HOH . C 3 HOH A 72 772 72 HOH HOH . C 3 HOH A 73 773 96 HOH HOH . C 3 HOH A 74 774 16 HOH HOH . C 3 HOH A 75 775 36 HOH HOH . C 3 HOH A 76 776 15 HOH HOH . C 3 HOH A 77 777 134 HOH HOH . C 3 HOH A 78 778 68 HOH HOH . C 3 HOH A 79 779 14 HOH HOH . C 3 HOH A 80 780 142 HOH HOH . C 3 HOH A 81 781 27 HOH HOH . C 3 HOH A 82 782 169 HOH HOH . C 3 HOH A 83 783 84 HOH HOH . C 3 HOH A 84 784 104 HOH HOH . C 3 HOH A 85 785 87 HOH HOH . C 3 HOH A 86 786 122 HOH HOH . C 3 HOH A 87 787 102 HOH HOH . C 3 HOH A 88 788 13 HOH HOH . C 3 HOH A 89 789 183 HOH HOH . C 3 HOH A 90 790 89 HOH HOH . C 3 HOH A 91 791 45 HOH HOH . C 3 HOH A 92 792 18 HOH HOH . C 3 HOH A 93 793 23 HOH HOH . C 3 HOH A 94 794 113 HOH HOH . C 3 HOH A 95 795 108 HOH HOH . C 3 HOH A 96 796 80 HOH HOH . C 3 HOH A 97 797 155 HOH HOH . C 3 HOH A 98 798 73 HOH HOH . C 3 HOH A 99 799 117 HOH HOH . C 3 HOH A 100 800 88 HOH HOH . C 3 HOH A 101 801 46 HOH HOH . C 3 HOH A 102 802 167 HOH HOH . C 3 HOH A 103 803 29 HOH HOH . C 3 HOH A 104 804 43 HOH HOH . C 3 HOH A 105 805 61 HOH HOH . C 3 HOH A 106 806 57 HOH HOH . C 3 HOH A 107 807 123 HOH HOH . C 3 HOH A 108 808 126 HOH HOH . C 3 HOH A 109 809 52 HOH HOH . C 3 HOH A 110 810 182 HOH HOH . C 3 HOH A 111 811 161 HOH HOH . C 3 HOH A 112 812 125 HOH HOH . C 3 HOH A 113 813 63 HOH HOH . C 3 HOH A 114 814 175 HOH HOH . C 3 HOH A 115 815 40 HOH HOH . C 3 HOH A 116 816 91 HOH HOH . C 3 HOH A 117 817 50 HOH HOH . C 3 HOH A 118 818 33 HOH HOH . C 3 HOH A 119 819 181 HOH HOH . C 3 HOH A 120 820 101 HOH HOH . C 3 HOH A 121 821 150 HOH HOH . C 3 HOH A 122 822 67 HOH HOH . C 3 HOH A 123 823 145 HOH HOH . C 3 HOH A 124 824 177 HOH HOH . C 3 HOH A 125 825 75 HOH HOH . C 3 HOH A 126 826 37 HOH HOH . C 3 HOH A 127 827 168 HOH HOH . C 3 HOH A 128 828 160 HOH HOH . C 3 HOH A 129 829 44 HOH HOH . C 3 HOH A 130 830 25 HOH HOH . C 3 HOH A 131 831 158 HOH HOH . C 3 HOH A 132 832 131 HOH HOH . C 3 HOH A 133 833 139 HOH HOH . C 3 HOH A 134 834 70 HOH HOH . C 3 HOH A 135 835 95 HOH HOH . C 3 HOH A 136 836 92 HOH HOH . C 3 HOH A 137 837 94 HOH HOH . C 3 HOH A 138 838 180 HOH HOH . C 3 HOH A 139 839 97 HOH HOH . C 3 HOH A 140 840 49 HOH HOH . C 3 HOH A 141 841 60 HOH HOH . C 3 HOH A 142 842 152 HOH HOH . C 3 HOH A 143 843 164 HOH HOH . C 3 HOH A 144 844 66 HOH HOH . C 3 HOH A 145 845 156 HOH HOH . C 3 HOH A 146 846 34 HOH HOH . C 3 HOH A 147 847 114 HOH HOH . C 3 HOH A 148 848 90 HOH HOH . C 3 HOH A 149 849 148 HOH HOH . C 3 HOH A 150 850 24 HOH HOH . C 3 HOH A 151 851 141 HOH HOH . C 3 HOH A 152 852 133 HOH HOH . C 3 HOH A 153 853 157 HOH HOH . C 3 HOH A 154 854 136 HOH HOH . C 3 HOH A 155 855 159 HOH HOH . C 3 HOH A 156 856 111 HOH HOH . C 3 HOH A 157 857 119 HOH HOH . C 3 HOH A 158 858 176 HOH HOH . C 3 HOH A 159 859 74 HOH HOH . C 3 HOH A 160 860 146 HOH HOH . C 3 HOH A 161 861 110 HOH HOH . C 3 HOH A 162 862 153 HOH HOH . C 3 HOH A 163 863 154 HOH HOH . C 3 HOH A 164 864 149 HOH HOH . C 3 HOH A 165 865 79 HOH HOH . C 3 HOH A 166 866 140 HOH HOH . C 3 HOH A 167 867 35 HOH HOH . C 3 HOH A 168 868 120 HOH HOH . C 3 HOH A 169 869 172 HOH HOH . C 3 HOH A 170 870 184 HOH HOH . C 3 HOH A 171 871 100 HOH HOH . C 3 HOH A 172 872 143 HOH HOH . C 3 HOH A 173 873 144 HOH HOH . C 3 HOH A 174 874 106 HOH HOH . C 3 HOH A 175 875 170 HOH HOH . C 3 HOH A 176 876 121 HOH HOH . C 3 HOH A 177 877 127 HOH HOH . C 3 HOH A 178 878 124 HOH HOH . C 3 HOH A 179 879 129 HOH HOH . C 3 HOH A 180 880 99 HOH HOH . C 3 HOH A 181 881 162 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 CQO . . . B 2 81.073 144.291 18.603 1 30.82 ? C10 CQO 601 A 1 HETATM 2 C C13 CQO . . . B 2 84.408 142.09 13.712 1 32.41 ? C13 CQO 601 A 1 HETATM 3 C C17 CQO . . . B 2 78.513 140.874 16.265 1 52.29 ? C17 CQO 601 A 1 HETATM 4 C C22 CQO . . . B 2 84.103 139.839 12.3 1 48.43 ? C22 CQO 601 A 1 HETATM 5 C C01 CQO . . . B 2 81.922 142.808 16.935 1 34.15 ? C01 CQO 601 A 1 HETATM 6 C C02 CQO . . . B 2 82.742 142.577 15.875 1 33.07 ? C02 CQO 601 A 1 HETATM 7 C C03 CQO . . . B 2 83.554 143.585 15.382 1 30.04 ? C03 CQO 601 A 1 HETATM 8 C C05 CQO . . . B 2 82.721 145.045 17.013 1 30.84 ? C05 CQO 601 A 1 HETATM 9 C C06 CQO . . . B 2 81.907 144.042 17.514 1 32.43 ? C06 CQO 601 A 1 HETATM 10 C C07 CQO . . . B 2 82.709 146.313 17.578 1 29.65 ? C07 CQO 601 A 1 HETATM 11 C C08 CQO . . . B 2 81.88 146.559 18.664 1 28.58 ? C08 CQO 601 A 1 HETATM 12 C C09 CQO . . . B 2 81.064 145.558 19.174 1 29.91 ? C09 CQO 601 A 1 HETATM 13 C C11 CQO . . . B 2 82.756 141.324 15.283 1 33.78 ? C11 CQO 601 A 1 HETATM 14 C C12 CQO . . . B 2 83.589 141.079 14.203 1 37.41 ? C12 CQO 601 A 1 HETATM 15 C C14 CQO . . . B 2 84.383 143.348 14.297 1 30.82 ? C14 CQO 601 A 1 HETATM 16 C C16 CQO . . . B 2 79.101 141.79 17.337 1 47.31 ? C16 CQO 601 A 1 HETATM 17 C C18 CQO . . . B 2 77.858 141.704 15.154 1 39.86 ? C18 CQO 601 A 1 HETATM 18 C C23 CQO . . . B 2 79.301 144.88 20.622 1 32.83 ? C23 CQO 601 A 1 HETATM 19 N N04 CQO . . . B 2 83.535 144.81 15.96 1 33.37 ? N04 CQO 601 A 1 HETATM 20 N N19 CQO . . . B 2 78.424 141.334 13.858 1 38.08 ? N19 CQO 601 A 1 HETATM 21 O O20 CQO . . . B 2 80.24 145.863 20.262 1 33.46 ? O20 CQO 601 A 1 HETATM 22 O O21 CQO . . . B 2 83.612 139.805 13.611 1 45.42 ? O21 CQO 601 A 1 HETATM 23 S S15 CQO . . . B 2 80.887 141.445 17.55 1 48.47 ? S15 CQO 601 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #