data_6K0W
#
_model_server_result.job_id            tVyeBbck9hKUK5qyWqnJ4A 
_model_server_result.datetime_utc      '2024-10-19 10:19:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6k0w 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":901}' 
#
_entry.id    6K0W 
#
_exptl.entry_id    6K0W 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              381.387 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            SINEFUNGIN 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.5 
_cell.angle_gamma         90 
_cell.entry_id            6K0W 
_cell.length_a            123.81 
_cell.length_b            88.48 
_cell.length_c            163.33 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6K0W 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        3 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,H,I,L 1 1 
B,C,F,G,J,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
_chem_comp.formula           'C15 H23 N7 O5' 
_chem_comp.formula_weight    381.387 
_chem_comp.id                SFG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              SINEFUNGIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ADENOSYL-ORNITHINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SFG sing 290 n n 
N HN1 SFG sing 291 n n 
N HN2 SFG sing 292 n n 
CA C SFG sing 293 n n 
CA CB SFG sing 294 n n 
CA HA SFG sing 295 n n 
C O SFG doub 296 n n 
C OXT SFG sing 297 n n 
OXT HXT SFG sing 298 n n 
CB CG SFG sing 299 n n 
CB HB1 SFG sing 300 n n 
CB HB2 SFG sing 301 n n 
CG CD SFG sing 302 n n 
CG HG1 SFG sing 303 n n 
CG HG2 SFG sing 304 n n 
CD NE SFG sing 305 n n 
CD C5' SFG sing 306 n n 
CD HD SFG sing 307 n n 
NE HNE1 SFG sing 308 n n 
NE HNE2 SFG sing 309 n n 
C5' C4' SFG sing 310 n n 
C5' "H5'1" SFG sing 311 n n 
C5' "H5'2" SFG sing 312 n n 
C4' O4' SFG sing 313 n n 
C4' C3' SFG sing 314 n n 
C4' H4' SFG sing 315 n n 
O4' C1' SFG sing 316 n n 
C3' O3' SFG sing 317 n n 
C3' C2' SFG sing 318 n n 
C3' H3' SFG sing 319 n n 
O3' HO3' SFG sing 320 n n 
C2' O2' SFG sing 321 n n 
C2' C1' SFG sing 322 n n 
C2' H2' SFG sing 323 n n 
O2' HO2' SFG sing 324 n n 
C1' N9 SFG sing 325 n n 
C1' H1' SFG sing 326 n n 
N9 C8 SFG sing 327 n y 
N9 C4 SFG sing 328 n y 
C8 N7 SFG doub 329 n y 
C8 H8 SFG sing 330 n n 
N7 C5 SFG sing 331 n y 
C5 C6 SFG sing 332 n y 
C5 C4 SFG doub 333 n y 
C6 N6 SFG sing 334 n n 
C6 N1 SFG doub 335 n y 
N6 HN61 SFG sing 336 n n 
N6 HN62 SFG sing 337 n n 
N1 C2 SFG sing 338 n y 
C2 N3 SFG doub 339 n y 
C2 H2 SFG sing 340 n n 
N3 C4 SFG sing 341 n y 
#
_atom_sites.entry_id                     6K0W 
_atom_sites.fract_transf_matrix[1][1]    0.008077 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00092 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011302 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006162 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SFG B 1 601 601 SFG SFG . 
F 2 SFG A 1 701 701 SFG SFG . 
G 2 SFG C 1 801 801 SFG SFG . 
H 2 SFG D 1 901 901 SFG SFG . 
I 3 HOH B 1 701 90 HOH HOH . 
I 3 HOH B 2 702 20 HOH HOH . 
I 3 HOH B 3 703 73 HOH HOH . 
I 3 HOH B 4 704 2 HOH HOH . 
I 3 HOH B 5 705 10 HOH HOH . 
I 3 HOH B 6 706 71 HOH HOH . 
I 3 HOH B 7 707 75 HOH HOH . 
I 3 HOH B 8 708 63 HOH HOH . 
I 3 HOH B 9 709 106 HOH HOH . 
I 3 HOH B 10 710 11 HOH HOH . 
I 3 HOH B 11 711 4 HOH HOH . 
I 3 HOH B 12 712 64 HOH HOH . 
I 3 HOH B 13 713 41 HOH HOH . 
I 3 HOH B 14 714 34 HOH HOH . 
I 3 HOH B 15 715 85 HOH HOH . 
I 3 HOH B 16 716 81 HOH HOH . 
I 3 HOH B 17 717 54 HOH HOH . 
I 3 HOH B 18 718 78 HOH HOH . 
I 3 HOH B 19 719 33 HOH HOH . 
J 3 HOH A 1 801 60 HOH HOH . 
J 3 HOH A 2 802 23 HOH HOH . 
J 3 HOH A 3 803 29 HOH HOH . 
J 3 HOH A 4 804 79 HOH HOH . 
J 3 HOH A 5 805 5 HOH HOH . 
J 3 HOH A 6 806 3 HOH HOH . 
J 3 HOH A 7 807 74 HOH HOH . 
J 3 HOH A 8 808 110 HOH HOH . 
J 3 HOH A 9 809 103 HOH HOH . 
J 3 HOH A 10 810 31 HOH HOH . 
J 3 HOH A 11 811 107 HOH HOH . 
J 3 HOH A 12 812 108 HOH HOH . 
J 3 HOH A 13 813 24 HOH HOH . 
J 3 HOH A 14 814 27 HOH HOH . 
J 3 HOH A 15 815 92 HOH HOH . 
J 3 HOH A 16 816 95 HOH HOH . 
J 3 HOH A 17 817 91 HOH HOH . 
J 3 HOH A 18 818 6 HOH HOH . 
J 3 HOH A 19 819 48 HOH HOH . 
J 3 HOH A 20 820 46 HOH HOH . 
J 3 HOH A 21 821 1 HOH HOH . 
J 3 HOH A 22 822 58 HOH HOH . 
J 3 HOH A 23 823 77 HOH HOH . 
J 3 HOH A 24 824 9 HOH HOH . 
J 3 HOH A 25 825 89 HOH HOH . 
J 3 HOH A 26 826 42 HOH HOH . 
J 3 HOH A 27 827 93 HOH HOH . 
J 3 HOH A 28 828 101 HOH HOH . 
K 3 HOH C 1 901 65 HOH HOH . 
K 3 HOH C 2 902 28 HOH HOH . 
K 3 HOH C 3 903 83 HOH HOH . 
K 3 HOH C 4 904 37 HOH HOH . 
K 3 HOH C 5 905 13 HOH HOH . 
K 3 HOH C 6 906 21 HOH HOH . 
K 3 HOH C 7 907 70 HOH HOH . 
K 3 HOH C 8 908 22 HOH HOH . 
K 3 HOH C 9 909 12 HOH HOH . 
K 3 HOH C 10 910 25 HOH HOH . 
K 3 HOH C 11 911 105 HOH HOH . 
K 3 HOH C 12 912 55 HOH HOH . 
K 3 HOH C 13 913 14 HOH HOH . 
K 3 HOH C 14 914 99 HOH HOH . 
K 3 HOH C 15 915 82 HOH HOH . 
K 3 HOH C 16 916 16 HOH HOH . 
K 3 HOH C 17 917 17 HOH HOH . 
K 3 HOH C 18 918 109 HOH HOH . 
K 3 HOH C 19 919 15 HOH HOH . 
K 3 HOH C 20 920 26 HOH HOH . 
K 3 HOH C 21 921 53 HOH HOH . 
K 3 HOH C 22 922 84 HOH HOH . 
K 3 HOH C 23 923 56 HOH HOH . 
K 3 HOH C 24 924 43 HOH HOH . 
K 3 HOH C 25 925 40 HOH HOH . 
K 3 HOH C 26 926 59 HOH HOH . 
K 3 HOH C 27 927 32 HOH HOH . 
K 3 HOH C 28 928 30 HOH HOH . 
K 3 HOH C 29 929 97 HOH HOH . 
K 3 HOH C 30 930 96 HOH HOH . 
K 3 HOH C 31 931 111 HOH HOH . 
L 3 HOH D 1 1001 57 HOH HOH . 
L 3 HOH D 2 1002 61 HOH HOH . 
L 3 HOH D 3 1003 44 HOH HOH . 
L 3 HOH D 4 1004 36 HOH HOH . 
L 3 HOH D 5 1005 45 HOH HOH . 
L 3 HOH D 6 1006 7 HOH HOH . 
L 3 HOH D 7 1007 66 HOH HOH . 
L 3 HOH D 8 1008 8 HOH HOH . 
L 3 HOH D 9 1009 72 HOH HOH . 
L 3 HOH D 10 1010 52 HOH HOH . 
L 3 HOH D 11 1011 18 HOH HOH . 
L 3 HOH D 12 1012 51 HOH HOH . 
L 3 HOH D 13 1013 35 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SFG . . . H 2 144.481 75.584 388.58 1 50.28 ? N SFG 901 D 1 
HETATM 2 C CA SFG . . . H 2 143.492 76.649 388.428 1 54.66 ? CA SFG 901 D 1 
HETATM 3 C C SFG . . . H 2 142.764 76.878 389.768 1 61.83 ? C SFG 901 D 1 
HETATM 4 O O SFG . . . H 2 143.156 76.286 390.77 1 54.26 ? O SFG 901 D 1 
HETATM 5 O OXT SFG . . . H 2 141.749 77.682 389.787 1 67.11 ? OXT SFG 901 D 1 
HETATM 6 C CB SFG . . . H 2 142.445 76.351 387.386 1 46.18 ? CB SFG 901 D 1 
HETATM 7 C CG SFG . . . H 2 143.096 76.183 385.969 1 50.75 ? CG SFG 901 D 1 
HETATM 8 C CD SFG . . . H 2 141.983 76.188 384.965 1 53.89 ? CD SFG 901 D 1 
HETATM 9 N NE SFG . . . H 2 141.231 74.989 385.057 1 59.92 ? NE SFG 901 D 1 
HETATM 10 C C5' SFG . . . H 2 142.594 76.366 383.504 1 58.39 ? C5' SFG 901 D 1 
HETATM 11 C C4' SFG . . . H 2 143.061 77.859 383.362 1 65.45 ? C4' SFG 901 D 1 
HETATM 12 O O4' SFG . . . H 2 143.922 78.019 382.388 1 62.26 ? O4' SFG 901 D 1 
HETATM 13 C C3' SFG . . . H 2 141.821 78.725 383.041 1 57.58 ? C3' SFG 901 D 1 
HETATM 14 O O3' SFG . . . H 2 141.835 79.833 383.82 1 62.9 ? O3' SFG 901 D 1 
HETATM 15 C C2' SFG . . . H 2 142.003 79.062 381.574 1 63.18 ? C2' SFG 901 D 1 
HETATM 16 O O2' SFG . . . H 2 141.325 80.386 381.231 1 71.81 ? O2' SFG 901 D 1 
HETATM 17 C C1' SFG . . . H 2 143.306 79.146 381.442 1 59.9 ? C1' SFG 901 D 1 
HETATM 18 N N9 SFG . . . H 2 143.672 78.994 380.029 1 56.81 ? N9 SFG 901 D 1 
HETATM 19 C C8 SFG . . . H 2 142.938 78.47 379.032 1 53.44 ? C8 SFG 901 D 1 
HETATM 20 N N7 SFG . . . H 2 143.652 78.574 377.907 1 56.17 ? N7 SFG 901 D 1 
HETATM 21 C C5 SFG . . . H 2 144.816 79.178 378.198 1 56.74 ? C5 SFG 901 D 1 
HETATM 22 C C6 SFG . . . H 2 145.909 79.542 377.429 1 64.11 ? C6 SFG 901 D 1 
HETATM 23 N N6 SFG . . . H 2 146.181 79.39 375.996 1 68.78 ? N6 SFG 901 D 1 
HETATM 24 N N1 SFG . . . H 2 146.955 80.143 377.971 1 62.86 ? N1 SFG 901 D 1 
HETATM 25 C C2 SFG . . . H 2 146.952 80.41 379.304 1 60.91 ? C2 SFG 901 D 1 
HETATM 26 N N3 SFG . . . H 2 145.873 80.057 380.047 1 64.97 ? N3 SFG 901 D 1 
HETATM 27 C C4 SFG . . . H 2 144.813 79.447 379.508 1 58.43 ? C4 SFG 901 D 1 
#
_model_server_stats.io_time_ms              120 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           310 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           27 
#