data_6K0X
#
_model_server_result.job_id            cwvb3wdcbnrgj3vpJMN-Jw 
_model_server_result.datetime_utc      '2024-11-13 20:43:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6k0x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":301}' 
#
_entry.id    6K0X 
#
_exptl.entry_id    6K0X 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              398.437 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-ADENOSYLMETHIONINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6K0X 
_cell.length_a            109.607 
_cell.length_b            109.607 
_cell.length_c            130.368 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6K0X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C15 H22 N6 O5 S' 
_chem_comp.formula_weight    398.437 
_chem_comp.id                SAM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              S-ADENOSYLMETHIONINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA SAM sing 277 n n 
N HN1 SAM sing 278 n n 
N HN2 SAM sing 279 n n 
CA C SAM sing 280 n n 
CA CB SAM sing 281 n n 
CA HA SAM sing 282 n n 
C O SAM doub 283 n n 
C OXT SAM sing 284 n n 
CB CG SAM sing 285 n n 
CB HB1 SAM sing 286 n n 
CB HB2 SAM sing 287 n n 
CG SD SAM sing 288 n n 
CG HG1 SAM sing 289 n n 
CG HG2 SAM sing 290 n n 
SD CE SAM sing 291 n n 
SD C5' SAM sing 292 n n 
CE HE1 SAM sing 293 n n 
CE HE2 SAM sing 294 n n 
CE HE3 SAM sing 295 n n 
C5' C4' SAM sing 296 n n 
C5' "H5'1" SAM sing 297 n n 
C5' "H5'2" SAM sing 298 n n 
C4' O4' SAM sing 299 n n 
C4' C3' SAM sing 300 n n 
C4' H4' SAM sing 301 n n 
O4' C1' SAM sing 302 n n 
C3' O3' SAM sing 303 n n 
C3' C2' SAM sing 304 n n 
C3' H3' SAM sing 305 n n 
O3' HO3' SAM sing 306 n n 
C2' O2' SAM sing 307 n n 
C2' C1' SAM sing 308 n n 
C2' H2' SAM sing 309 n n 
O2' HO2' SAM sing 310 n n 
C1' N9 SAM sing 311 n n 
C1' H1' SAM sing 312 n n 
N9 C8 SAM sing 313 n y 
N9 C4 SAM sing 314 n y 
C8 N7 SAM doub 315 n y 
C8 H8 SAM sing 316 n n 
N7 C5 SAM sing 317 n y 
C5 C6 SAM sing 318 n y 
C5 C4 SAM doub 319 n y 
C6 N6 SAM sing 320 n n 
C6 N1 SAM doub 321 n y 
N6 HN61 SAM sing 322 n n 
N6 HN62 SAM sing 323 n n 
N1 C2 SAM sing 324 n y 
C2 N3 SAM doub 325 n y 
C2 H2 SAM sing 326 n n 
N3 C4 SAM sing 327 n y 
#
_atom_sites.entry_id                     6K0X 
_atom_sites.fract_transf_matrix[1][1]    0.009124 
_atom_sites.fract_transf_matrix[1][2]    0.005267 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010535 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007671 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SAM A 1 301 301 SAM SAM . 
D 4 HOH A 1 401 139 HOH HOH . 
D 4 HOH A 2 402 28 HOH HOH . 
D 4 HOH A 3 403 5 HOH HOH . 
D 4 HOH A 4 404 11 HOH HOH . 
D 4 HOH A 5 405 103 HOH HOH . 
D 4 HOH A 6 406 51 HOH HOH . 
D 4 HOH A 7 407 39 HOH HOH . 
D 4 HOH A 8 408 132 HOH HOH . 
D 4 HOH A 9 409 25 HOH HOH . 
D 4 HOH A 10 410 55 HOH HOH . 
D 4 HOH A 11 411 44 HOH HOH . 
D 4 HOH A 12 412 134 HOH HOH . 
D 4 HOH A 13 413 111 HOH HOH . 
D 4 HOH A 14 414 16 HOH HOH . 
D 4 HOH A 15 415 27 HOH HOH . 
D 4 HOH A 16 416 107 HOH HOH . 
D 4 HOH A 17 417 13 HOH HOH . 
D 4 HOH A 18 418 114 HOH HOH . 
D 4 HOH A 19 419 50 HOH HOH . 
D 4 HOH A 20 420 47 HOH HOH . 
D 4 HOH A 21 421 46 HOH HOH . 
D 4 HOH A 22 422 7 HOH HOH . 
D 4 HOH A 23 423 57 HOH HOH . 
D 4 HOH A 24 424 100 HOH HOH . 
D 4 HOH A 25 425 19 HOH HOH . 
D 4 HOH A 26 426 110 HOH HOH . 
D 4 HOH A 27 427 29 HOH HOH . 
D 4 HOH A 28 428 116 HOH HOH . 
D 4 HOH A 29 429 60 HOH HOH . 
D 4 HOH A 30 430 94 HOH HOH . 
D 4 HOH A 31 431 67 HOH HOH . 
D 4 HOH A 32 432 78 HOH HOH . 
D 4 HOH A 33 433 80 HOH HOH . 
D 4 HOH A 34 434 97 HOH HOH . 
D 4 HOH A 35 435 56 HOH HOH . 
D 4 HOH A 36 436 127 HOH HOH . 
D 4 HOH A 37 437 88 HOH HOH . 
D 4 HOH A 38 438 21 HOH HOH . 
D 4 HOH A 39 439 81 HOH HOH . 
D 4 HOH A 40 440 95 HOH HOH . 
D 4 HOH A 41 441 87 HOH HOH . 
D 4 HOH A 42 442 24 HOH HOH . 
D 4 HOH A 43 443 92 HOH HOH . 
D 4 HOH A 44 444 41 HOH HOH . 
D 4 HOH A 45 445 31 HOH HOH . 
D 4 HOH A 46 446 96 HOH HOH . 
D 4 HOH A 47 447 58 HOH HOH . 
D 4 HOH A 48 448 73 HOH HOH . 
D 4 HOH A 49 449 102 HOH HOH . 
D 4 HOH A 50 450 12 HOH HOH . 
D 4 HOH A 51 451 71 HOH HOH . 
D 4 HOH A 52 452 115 HOH HOH . 
D 4 HOH A 53 453 133 HOH HOH . 
D 4 HOH A 54 454 4 HOH HOH . 
D 4 HOH A 55 455 61 HOH HOH . 
D 4 HOH A 56 456 66 HOH HOH . 
D 4 HOH A 57 457 79 HOH HOH . 
D 4 HOH A 58 458 54 HOH HOH . 
D 4 HOH A 59 459 37 HOH HOH . 
D 4 HOH A 60 460 135 HOH HOH . 
D 4 HOH A 61 461 20 HOH HOH . 
D 4 HOH A 62 462 120 HOH HOH . 
D 4 HOH A 63 463 91 HOH HOH . 
D 4 HOH A 64 464 53 HOH HOH . 
D 4 HOH A 65 465 122 HOH HOH . 
E 4 HOH B 1 201 62 HOH HOH . 
E 4 HOH B 2 202 105 HOH HOH . 
E 4 HOH B 3 203 137 HOH HOH . 
E 4 HOH B 4 204 138 HOH HOH . 
E 4 HOH B 5 205 68 HOH HOH . 
E 4 HOH B 6 206 101 HOH HOH . 
E 4 HOH B 7 207 3 HOH HOH . 
E 4 HOH B 8 208 9 HOH HOH . 
E 4 HOH B 9 209 32 HOH HOH . 
E 4 HOH B 10 210 35 HOH HOH . 
E 4 HOH B 11 211 23 HOH HOH . 
E 4 HOH B 12 212 17 HOH HOH . 
E 4 HOH B 13 213 1 HOH HOH . 
E 4 HOH B 14 214 59 HOH HOH . 
E 4 HOH B 15 215 63 HOH HOH . 
E 4 HOH B 16 216 38 HOH HOH . 
E 4 HOH B 17 217 30 HOH HOH . 
E 4 HOH B 18 218 2 HOH HOH . 
E 4 HOH B 19 219 10 HOH HOH . 
E 4 HOH B 20 220 42 HOH HOH . 
E 4 HOH B 21 221 48 HOH HOH . 
E 4 HOH B 22 222 93 HOH HOH . 
E 4 HOH B 23 223 74 HOH HOH . 
E 4 HOH B 24 224 52 HOH HOH . 
E 4 HOH B 25 225 8 HOH HOH . 
E 4 HOH B 26 226 43 HOH HOH . 
E 4 HOH B 27 227 126 HOH HOH . 
E 4 HOH B 28 228 22 HOH HOH . 
E 4 HOH B 29 229 40 HOH HOH . 
E 4 HOH B 30 230 119 HOH HOH . 
E 4 HOH B 31 231 45 HOH HOH . 
E 4 HOH B 32 232 82 HOH HOH . 
E 4 HOH B 33 233 69 HOH HOH . 
E 4 HOH B 34 234 77 HOH HOH . 
E 4 HOH B 35 235 26 HOH HOH . 
E 4 HOH B 36 236 15 HOH HOH . 
E 4 HOH B 37 237 129 HOH HOH . 
E 4 HOH B 38 238 86 HOH HOH . 
E 4 HOH B 39 239 118 HOH HOH . 
E 4 HOH B 40 240 64 HOH HOH . 
E 4 HOH B 41 241 18 HOH HOH . 
E 4 HOH B 42 242 106 HOH HOH . 
E 4 HOH B 43 243 85 HOH HOH . 
E 4 HOH B 44 244 89 HOH HOH . 
E 4 HOH B 45 245 99 HOH HOH . 
E 4 HOH B 46 246 36 HOH HOH . 
E 4 HOH B 47 247 136 HOH HOH . 
E 4 HOH B 48 248 128 HOH HOH . 
E 4 HOH B 49 249 72 HOH HOH . 
E 4 HOH B 50 250 123 HOH HOH . 
E 4 HOH B 51 251 113 HOH HOH . 
E 4 HOH B 52 252 76 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N SAM . . . C 3 15.499 36.037 75.292 1 31.21 ? N SAM 301 A 1 
HETATM 2 C CA SAM . . . C 3 15.713 34.722 75.879 1 32.88 ? CA SAM 301 A 1 
HETATM 3 C C SAM . . . C 3 17.186 34.338 75.744 1 40.11 ? C SAM 301 A 1 
HETATM 4 O O SAM . . . C 3 17.942 34.973 74.988 1 34.29 ? O SAM 301 A 1 
HETATM 5 O OXT SAM . . . C 3 17.637 33.394 76.406 1 34.14 ? OXT SAM 301 A 1 
HETATM 6 C CB SAM . . . C 3 14.806 33.653 75.245 1 29.65 ? CB SAM 301 A 1 
HETATM 7 C CG SAM . . . C 3 15.068 33.234 73.797 1 20.71 ? CG SAM 301 A 1 
HETATM 8 S SD SAM . . . C 3 14.102 31.789 73.243 1 19.39 ? SD SAM 301 A 1 
HETATM 9 C CE SAM . . . C 3 15.138 31.457 71.783 1 44.38 ? CE SAM 301 A 1 
HETATM 10 C C5' SAM . . . C 3 12.73 32.641 72.39 1 26.65 ? C5' SAM 301 A 1 
HETATM 11 C C4' SAM . . . C 3 11.732 33.358 73.318 1 32.3 ? C4' SAM 301 A 1 
HETATM 12 O O4' SAM . . . C 3 10.751 34.032 72.553 1 36.56 ? O4' SAM 301 A 1 
HETATM 13 C C3' SAM . . . C 3 10.962 32.377 74.193 1 29.37 ? C3' SAM 301 A 1 
HETATM 14 O O3' SAM . . . C 3 10.927 32.906 75.494 1 28.79 ? O3' SAM 301 A 1 
HETATM 15 C C2' SAM . . . C 3 9.56 32.324 73.607 1 30.5 ? C2' SAM 301 A 1 
HETATM 16 O O2' SAM . . . C 3 8.568 32.084 74.588 1 28.48 ? O2' SAM 301 A 1 
HETATM 17 C C1' SAM . . . C 3 9.445 33.716 73.006 1 30.79 ? C1' SAM 301 A 1 
HETATM 18 N N9 SAM . . . C 3 8.464 33.82 71.904 1 31.86 ? N9 SAM 301 A 1 
HETATM 19 C C8 SAM . . . C 3 8.133 32.888 70.952 1 27.59 ? C8 SAM 301 A 1 
HETATM 20 N N7 SAM . . . C 3 7.18 33.411 70.131 1 26.44 ? N7 SAM 301 A 1 
HETATM 21 C C5 SAM . . . C 3 6.9 34.667 70.55 1 31.45 ? C5 SAM 301 A 1 
HETATM 22 C C6 SAM . . . C 3 6.024 35.649 70.098 1 31.41 ? C6 SAM 301 A 1 
HETATM 23 N N6 SAM . . . C 3 5.242 35.441 69.045 1 27.6 ? N6 SAM 301 A 1 
HETATM 24 N N1 SAM . . . C 3 5.962 36.858 70.755 1 30.86 ? N1 SAM 301 A 1 
HETATM 25 C C2 SAM . . . C 3 6.758 37.106 71.854 1 30.97 ? C2 SAM 301 A 1 
HETATM 26 N N3 SAM . . . C 3 7.625 36.131 72.291 1 32.53 ? N3 SAM 301 A 1 
HETATM 27 C C4 SAM . . . C 3 7.695 34.933 71.66 1 32.04 ? C4 SAM 301 A 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           27 
#