data_6K37 # _model_server_result.job_id ngGWb6H1kEC6ds_mSviUkg _model_server_result.datetime_utc '2024-11-20 06:20:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6k37 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6K37 # _exptl.entry_id 6K37 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 231.289 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3R)-3-[(1R)-1-azanylethyl]nonanedioic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6K37 _cell.length_a 70.414 _cell.length_b 70.414 _cell.length_c 98.778 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6K37 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C11 H21 N O4' _chem_comp.formula_weight 231.289 _chem_comp.id CWL _chem_comp.mon_nstd_flag . _chem_comp.name '(3R)-3-[(1R)-1-azanylethyl]nonanedioic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAD CAN CWL doub 70 n n NAB CAO CWL sing 71 n n OAF CAN CWL sing 72 n n CAN CAL CWL sing 73 n n CAO CAA CWL sing 74 n n CAO CAP CWL sing 75 n n CAL CAP CWL sing 76 n n CAP CAK CWL sing 77 n n CAK CAI CWL sing 78 n n CAI CAG CWL sing 79 n n CAG CAH CWL sing 80 n n CAH CAJ CWL sing 81 n n CAJ CAM CWL sing 82 n n CAM OAE CWL doub 83 n n CAM OAC CWL sing 84 n n OAF H1 CWL sing 85 n n CAL H2 CWL sing 86 n n CAL H3 CWL sing 87 n n CAP H4 CWL sing 88 n n CAO H5 CWL sing 89 n n CAA H6 CWL sing 90 n n CAA H7 CWL sing 91 n n CAA H8 CWL sing 92 n n NAB H9 CWL sing 93 n n NAB H10 CWL sing 94 n n CAK H12 CWL sing 95 n n CAK H13 CWL sing 96 n n CAI H14 CWL sing 97 n n CAI H15 CWL sing 98 n n CAG H16 CWL sing 99 n n CAG H17 CWL sing 100 n n CAH H18 CWL sing 101 n n CAH H19 CWL sing 102 n n CAJ H20 CWL sing 103 n n CAJ H21 CWL sing 104 n n OAC H22 CWL sing 105 n n # _atom_sites.entry_id 6K37 _atom_sites.fract_transf_matrix[1][1] 0.014202 _atom_sites.fract_transf_matrix[1][2] 0.008199 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016399 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010124 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAD A 1 401 401 NAD NAD . C 3 CWL A 1 402 501 CWL DRG . D 4 HOH A 1 501 9 HOH HOH . D 4 HOH A 2 502 5 HOH HOH . D 4 HOH A 3 503 3 HOH HOH . D 4 HOH A 4 504 15 HOH HOH . D 4 HOH A 5 505 14 HOH HOH . D 4 HOH A 6 506 6 HOH HOH . D 4 HOH A 7 507 12 HOH HOH . D 4 HOH A 8 508 11 HOH HOH . D 4 HOH A 9 509 20 HOH HOH . D 4 HOH A 10 510 1 HOH HOH . D 4 HOH A 11 511 4 HOH HOH . D 4 HOH A 12 512 7 HOH HOH . D 4 HOH A 13 513 13 HOH HOH . D 4 HOH A 14 514 21 HOH HOH . D 4 HOH A 15 515 17 HOH HOH . D 4 HOH A 16 516 18 HOH HOH . D 4 HOH A 17 517 19 HOH HOH . D 4 HOH A 18 518 8 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OAD CWL . . . C 3 8.767 -13.055 -13.422 1 75.54 ? OAD CWL 402 A 1 HETATM 2 C CAN CWL . . . C 3 8.217 -13.744 -12.517 1 72.71 ? CAN CWL 402 A 1 HETATM 3 O OAF CWL . . . C 3 7.544 -14.795 -12.664 1 77.59 ? OAF CWL 402 A 1 HETATM 4 C CAL CWL . . . C 3 8.322 -13.239 -11.091 1 59.7 ? CAL CWL 402 A 1 HETATM 5 C CAP CWL . . . C 3 9.174 -11.994 -11.019 1 59.51 ? CAP CWL 402 A 1 HETATM 6 C CAO CWL . . . C 3 10.609 -12.145 -11.646 1 60.48 ? CAO CWL 402 A 1 HETATM 7 C CAA CWL . . . C 3 11.137 -13.54 -11.425 1 67.74 ? CAA CWL 402 A 1 HETATM 8 N NAB CWL . . . C 3 10.727 -11.851 -13.077 1 59.4 ? NAB CWL 402 A 1 HETATM 9 C CAK CWL . . . C 3 9.333 -11.583 -9.558 1 60.21 ? CAK CWL 402 A 1 HETATM 10 C CAI CWL . . . C 3 8.018 -11.699 -8.827 1 47.4 ? CAI CWL 402 A 1 HETATM 11 C CAG CWL . . . C 3 8.34 -11.771 -7.362 1 46.81 ? CAG CWL 402 A 1 HETATM 12 C CAH CWL . . . C 3 8.891 -10.429 -6.836 1 44.91 ? CAH CWL 402 A 1 HETATM 13 C CAJ CWL . . . C 3 7.954 -9.794 -5.805 1 41.36 ? CAJ CWL 402 A 1 HETATM 14 C CAM CWL . . . C 3 8.736 -9.227 -4.631 1 40.52 ? CAM CWL 402 A 1 HETATM 15 O OAE CWL . . . C 3 8.706 -7.993 -4.471 1 38.88 ? OAE CWL 402 A 1 HETATM 16 O OAC CWL . . . C 3 9.256 -10.051 -3.853 1 36.7 ? OAC CWL 402 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #