data_6K42
#
_model_server_result.job_id            g6uYG1rjfItMgWGB7EVKZQ 
_model_server_result.datetime_utc      '2024-11-22 19:13:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6k42 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
#
_entry.id    6K42 
#
_exptl.entry_id    6K42 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              200.28 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            4-[(1~{S})-1-(2,3-dimethylphenyl)ethyl]-1~{H}-imidazole 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6K42 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6K42 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 284 R CYS 85 1_555 D SG CYS 363 R CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 E SG CYS 60 H CYS 22 1_555 E SG CYS 134 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 E SG CYS 197 H CYS 147 1_555 E SG CYS 267 H CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
#
_chem_comp.formula           'C13 H16 N2' 
_chem_comp.formula_weight    200.28 
_chem_comp.id                CZX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              4-[(1~{S})-1-(2,3-dimethylphenyl)ethyl]-1~{H}-imidazole 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C12 C11 CZX doub 83 n y 
C12 C09 CZX sing 84 n y 
C11 C08 CZX sing 85 n y 
C09 C04 CZX doub 86 n y 
C15 N01 CZX doub 87 n y 
C15 N02 CZX sing 88 n y 
N01 C06 CZX sing 89 n y 
C08 C14 CZX sing 90 n n 
C08 C05 CZX doub 91 n y 
N02 C13 CZX sing 92 n y 
C04 C05 CZX sing 93 n y 
C04 C03 CZX sing 94 n n 
C06 C13 CZX doub 95 n y 
C06 C03 CZX sing 96 n n 
C07 C03 CZX sing 97 n n 
C05 C10 CZX sing 98 n n 
C10 H1 CZX sing 99 n n 
C10 H2 CZX sing 100 n n 
C10 H3 CZX sing 101 n n 
C13 H4 CZX sing 102 n n 
C15 H5 CZX sing 103 n n 
C03 H6 CZX sing 104 n n 
C07 H7 CZX sing 105 n n 
C07 H8 CZX sing 106 n n 
C07 H9 CZX sing 107 n n 
C09 H10 CZX sing 108 n n 
C11 H11 CZX sing 109 n n 
C12 H12 CZX sing 110 n n 
C14 H13 CZX sing 111 n n 
C14 H14 CZX sing 112 n n 
C14 H15 CZX sing 113 n n 
N02 H17 CZX sing 114 n n 
#
_atom_sites.entry_id                     6K42 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        6 
_pdbx_nonpoly_scheme.mon_id           CZX 
_pdbx_nonpoly_scheme.pdb_strand_id    R 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      501 
_pdbx_nonpoly_scheme.auth_seq_num     2 
_pdbx_nonpoly_scheme.pdb_mon_id       CZX 
_pdbx_nonpoly_scheme.auth_mon_id      LIG 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 CZX . . . F 6 165.996 165.234 197.255 1 32.13 ? C10 CZX 501 R 1 
HETATM 2 C C13 CZX . . . F 6 169.945 166.59 194.64 1 32.13 ? C13 CZX 501 R 1 
HETATM 3 C C15 CZX . . . F 6 170.561 168.47 193.814 1 32.13 ? C15 CZX 501 R 1 
HETATM 4 C C03 CZX . . . F 6 167.773 167.302 195.829 1 32.13 ? C03 CZX 501 R 1 
HETATM 5 C C04 CZX . . . F 6 166.79 166.444 195.033 1 32.13 ? C04 CZX 501 R 1 
HETATM 6 C C05 CZX . . . F 6 165.905 165.414 195.737 1 32.13 ? C05 CZX 501 R 1 
HETATM 7 C C06 CZX . . . F 6 169.03 167.532 194.991 1 32.13 ? C06 CZX 501 R 1 
HETATM 8 C C07 CZX . . . F 6 167.134 168.648 196.152 1 32.13 ? C07 CZX 501 R 1 
HETATM 9 C C08 CZX . . . F 6 164.928 164.561 194.924 1 32.13 ? C08 CZX 501 R 1 
HETATM 10 C C09 CZX . . . F 6 166.693 166.616 193.52 1 32.13 ? C09 CZX 501 R 1 
HETATM 11 C C11 CZX . . . F 6 164.835 164.736 193.409 1 32.13 ? C11 CZX 501 R 1 
HETATM 12 C C12 CZX . . . F 6 165.719 165.765 192.705 1 32.13 ? C12 CZX 501 R 1 
HETATM 13 C C14 CZX . . . F 6 164.042 163.533 195.622 1 32.13 ? C14 CZX 501 R 1 
HETATM 14 N N01 CZX . . . F 6 169.416 168.678 194.48 1 32.13 ? N01 CZX 501 R 1 
HETATM 15 N N02 CZX . . . F 6 170.877 167.173 193.921 1 32.13 ? N02 CZX 501 R 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    24 
_model_server_stats.query_time_ms           308 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           15 
#