data_6K4J # _model_server_result.job_id AjsfcXDVQUjW8eS89mq0wg _model_server_result.datetime_utc '2024-11-08 18:55:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6k4j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6K4J # _exptl.entry_id 6K4J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6K4J _cell.length_a 45.18 _cell.length_b 125.21 _cell.length_c 129.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6K4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 157 A CYS 152 1_555 A SG CYS 181 A CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 158 A CYS 153 1_555 A SG CYS 172 A CYS 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A NE2 HIS 118 A HIS 113 1_555 D NI NI . A NI 303 8_456 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc2 A OE1 GLU 179 A GLU 174 1_555 D NI NI . A NI 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc3 A OE2 GLU 179 A GLU 174 1_555 D NI NI . A NI 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc4 A OE1 GLU 187 A GLU 187 1_555 D NI NI . A NI 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.9 ? metalc ? metalc5 A OE2 GLU 187 A GLU 187 1_555 D NI NI . A NI 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 324 n n C1 O2 PLM doub 325 n n C1 C2 PLM sing 326 n n O1 H PLM sing 327 n n C2 C3 PLM sing 328 n n C2 H21 PLM sing 329 n n C2 H22 PLM sing 330 n n C3 C4 PLM sing 331 n n C3 H31 PLM sing 332 n n C3 H32 PLM sing 333 n n C4 C5 PLM sing 334 n n C4 H41 PLM sing 335 n n C4 H42 PLM sing 336 n n C5 C6 PLM sing 337 n n C5 H51 PLM sing 338 n n C5 H52 PLM sing 339 n n C6 C7 PLM sing 340 n n C6 H61 PLM sing 341 n n C6 H62 PLM sing 342 n n C7 C8 PLM sing 343 n n C7 H71 PLM sing 344 n n C7 H72 PLM sing 345 n n C8 C9 PLM sing 346 n n C8 H81 PLM sing 347 n n C8 H82 PLM sing 348 n n C9 CA PLM sing 349 n n C9 H91 PLM sing 350 n n C9 H92 PLM sing 351 n n CA CB PLM sing 352 n n CA HA1 PLM sing 353 n n CA HA2 PLM sing 354 n n CB CC PLM sing 355 n n CB HB1 PLM sing 356 n n CB HB2 PLM sing 357 n n CC CD PLM sing 358 n n CC HC1 PLM sing 359 n n CC HC2 PLM sing 360 n n CD CE PLM sing 361 n n CD HD1 PLM sing 362 n n CD HD2 PLM sing 363 n n CE CF PLM sing 364 n n CE HE1 PLM sing 365 n n CE HE2 PLM sing 366 n n CF CG PLM sing 367 n n CF HF1 PLM sing 368 n n CF HF2 PLM sing 369 n n CG HG1 PLM sing 370 n n CG HG2 PLM sing 371 n n CG HG3 PLM sing 372 n n # _atom_sites.entry_id 6K4J _atom_sites.fract_transf_matrix[1][1] 0.022134 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007987 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007728 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PLM A 1 301 1 PLM PLM . C 3 OLC A 1 302 1 OLC OLC . D 4 NI A 1 303 1 NI NI . E 5 HOH A 1 401 7 HOH HOH . E 5 HOH A 2 402 6 HOH HOH . E 5 HOH A 3 403 8 HOH HOH . E 5 HOH A 4 404 18 HOH HOH . E 5 HOH A 5 405 5 HOH HOH . E 5 HOH A 6 406 4 HOH HOH . E 5 HOH A 7 407 13 HOH HOH . E 5 HOH A 8 408 15 HOH HOH . E 5 HOH A 9 409 16 HOH HOH . E 5 HOH A 10 410 11 HOH HOH . E 5 HOH A 11 411 14 HOH HOH . E 5 HOH A 12 412 17 HOH HOH . E 5 HOH A 13 413 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . B 2 25.936 71.612 48.753 1 78.64 ? C1 PLM 301 A 1 HETATM 2 O O2 PLM . . . B 2 25.381 72.56 48.129 1 71.14 ? O2 PLM 301 A 1 HETATM 3 C C2 PLM . . . B 2 25.108 70.964 49.919 1 66.8 ? C2 PLM 301 A 1 HETATM 4 C C3 PLM . . . B 2 23.61 70.801 49.65 1 65.28 ? C3 PLM 301 A 1 HETATM 5 C C4 PLM . . . B 2 22.783 70.411 50.885 1 71.59 ? C4 PLM 301 A 1 HETATM 6 C C5 PLM . . . B 2 23.183 69.062 51.503 1 75.56 ? C5 PLM 301 A 1 HETATM 7 C C6 PLM . . . B 2 22.054 68.375 52.286 1 70.13 ? C6 PLM 301 A 1 HETATM 8 C C7 PLM . . . B 2 22.537 67.288 53.26 1 65.13 ? C7 PLM 301 A 1 HETATM 9 C C8 PLM . . . B 2 21.419 66.703 54.136 1 63.48 ? C8 PLM 301 A 1 HETATM 10 C C9 PLM . . . B 2 21.923 65.964 55.384 1 62.54 ? C9 PLM 301 A 1 HETATM 11 C CA PLM . . . B 2 22.44 64.546 55.105 1 69.13 ? CA PLM 301 A 1 HETATM 12 C CB PLM . . . B 2 22.18 63.558 56.253 1 58.11 ? CB PLM 301 A 1 HETATM 13 C CC PLM . . . B 2 22.817 63.972 57.587 1 50.23 ? CC PLM 301 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 226 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 13 #