data_6K5Z # _model_server_result.job_id ccDzJezhY4DByvBzLx6E_Q _model_server_result.datetime_utc '2024-10-19 19:43:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6k5z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1004}' # _entry.id 6K5Z # _exptl.entry_id 6K5Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6K5Z _cell.length_a 73.194 _cell.length_b 73.194 _cell.length_c 126.036 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6K5Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 235 A CYS 235 1_555 A SG CYS 312 A CYS 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc1 A SG CYS 30 A CYS 30 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc2 A SG CYS 33 A CYS 33 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc3 A ND1 HIS 86 A HIS 86 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc4 A ND1 HIS 138 A HIS 138 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc5 A OE1 GLU 156 A GLU 156 1_555 E FE FE . A FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc6 A OE2 GLU 156 A GLU 156 1_555 E FE FE . A FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? metalc ? metalc7 A SG CYS 170 A CYS 170 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc8 A SG CYS 173 A CYS 173 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc9 A ND1 HIS 211 A HIS 211 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc10 A ND1 HIS 252 A HIS 252 1_555 E FE FE . A FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc11 A ND1 HIS 264 A HIS 264 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc12 A NE2 HIS 266 A HIS 266 1_555 E FE FE . A FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc13 A OE2 GLU 268 A GLU 268 1_555 E FE FE . A FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc14 E FE FE . A FE 1003 1_555 K O HOH . A HOH 1120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc15 B SG CYS 30 B CYS 30 1_555 G ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc16 B SG CYS 33 B CYS 33 1_555 G ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc17 B ND1 HIS 86 B HIS 86 1_555 G ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc18 B ND1 HIS 138 B HIS 138 1_555 G ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc19 B OE1 GLU 156 B GLU 156 1_555 I FE FE . B FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? metalc ? metalc20 B OE2 GLU 156 B GLU 156 1_555 I FE FE . B FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc21 B SG CYS 170 B CYS 170 1_555 H ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc22 B SG CYS 173 B CYS 173 1_555 H ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc23 B ND1 HIS 211 B HIS 211 1_555 H ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc24 B ND1 HIS 252 B HIS 252 1_555 I FE FE . B FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc25 B ND1 HIS 264 B HIS 264 1_555 H ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc26 B NE2 HIS 266 B HIS 266 1_555 I FE FE . B FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc27 B OE2 GLU 268 B GLU 268 1_555 I FE FE . B FE 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc28 I FE FE . B FE 1003 1_555 L O HOH . B HOH 1121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 6K5Z _atom_sites.fract_transf_matrix[1][1] 0.013662 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013662 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007934 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1001 1001 ZN ZN . D 2 ZN A 1 1002 1002 ZN ZN . E 3 FE A 1 1003 2001 FE FE . F 4 PO4 A 1 1004 3001 PO4 PO4 . G 2 ZN B 1 1001 1001 ZN ZN . H 2 ZN B 1 1002 1002 ZN ZN . I 3 FE B 1 1003 2001 FE FE . J 4 PO4 B 1 1004 3001 PO4 PO4 . K 5 HOH A 1 1101 59 HOH HOH . K 5 HOH A 2 1102 61 HOH HOH . K 5 HOH A 3 1103 63 HOH HOH . K 5 HOH A 4 1104 24 HOH HOH . K 5 HOH A 5 1105 37 HOH HOH . K 5 HOH A 6 1106 84 HOH HOH . K 5 HOH A 7 1107 77 HOH HOH . K 5 HOH A 8 1108 10 HOH HOH . K 5 HOH A 9 1109 58 HOH HOH . K 5 HOH A 10 1110 70 HOH HOH . K 5 HOH A 11 1111 67 HOH HOH . K 5 HOH A 12 1112 50 HOH HOH . K 5 HOH A 13 1113 48 HOH HOH . K 5 HOH A 14 1114 12 HOH HOH . K 5 HOH A 15 1115 33 HOH HOH . K 5 HOH A 16 1116 1 HOH HOH . K 5 HOH A 17 1117 11 HOH HOH . K 5 HOH A 18 1118 46 HOH HOH . K 5 HOH A 19 1119 5 HOH HOH . K 5 HOH A 20 1120 60 HOH HOH . K 5 HOH A 21 1121 35 HOH HOH . K 5 HOH A 22 1122 15 HOH HOH . K 5 HOH A 23 1123 21 HOH HOH . K 5 HOH A 24 1124 29 HOH HOH . K 5 HOH A 25 1125 20 HOH HOH . K 5 HOH A 26 1126 55 HOH HOH . K 5 HOH A 27 1127 27 HOH HOH . K 5 HOH A 28 1128 43 HOH HOH . K 5 HOH A 29 1129 17 HOH HOH . K 5 HOH A 30 1130 23 HOH HOH . K 5 HOH A 31 1131 40 HOH HOH . K 5 HOH A 32 1132 73 HOH HOH . K 5 HOH A 33 1133 26 HOH HOH . K 5 HOH A 34 1134 69 HOH HOH . K 5 HOH A 35 1135 16 HOH HOH . K 5 HOH A 36 1136 72 HOH HOH . K 5 HOH A 37 1137 71 HOH HOH . K 5 HOH A 38 1138 19 HOH HOH . K 5 HOH A 39 1139 53 HOH HOH . K 5 HOH A 40 1140 81 HOH HOH . K 5 HOH A 41 1141 54 HOH HOH . K 5 HOH A 42 1142 78 HOH HOH . K 5 HOH A 43 1143 30 HOH HOH . K 5 HOH A 44 1144 75 HOH HOH . K 5 HOH A 45 1145 66 HOH HOH . K 5 HOH A 46 1146 49 HOH HOH . K 5 HOH A 47 1147 68 HOH HOH . L 5 HOH B 1 1101 51 HOH HOH . L 5 HOH B 2 1102 4 HOH HOH . L 5 HOH B 3 1103 56 HOH HOH . L 5 HOH B 4 1104 38 HOH HOH . L 5 HOH B 5 1105 57 HOH HOH . L 5 HOH B 6 1106 13 HOH HOH . L 5 HOH B 7 1107 2 HOH HOH . L 5 HOH B 8 1108 8 HOH HOH . L 5 HOH B 9 1109 47 HOH HOH . L 5 HOH B 10 1110 6 HOH HOH . L 5 HOH B 11 1111 45 HOH HOH . L 5 HOH B 12 1112 83 HOH HOH . L 5 HOH B 13 1113 34 HOH HOH . L 5 HOH B 14 1114 64 HOH HOH . L 5 HOH B 15 1115 25 HOH HOH . L 5 HOH B 16 1116 42 HOH HOH . L 5 HOH B 17 1117 18 HOH HOH . L 5 HOH B 18 1118 39 HOH HOH . L 5 HOH B 19 1119 22 HOH HOH . L 5 HOH B 20 1120 44 HOH HOH . L 5 HOH B 21 1121 62 HOH HOH . L 5 HOH B 22 1122 7 HOH HOH . L 5 HOH B 23 1123 31 HOH HOH . L 5 HOH B 24 1124 80 HOH HOH . L 5 HOH B 25 1125 82 HOH HOH . L 5 HOH B 26 1126 3 HOH HOH . L 5 HOH B 27 1127 14 HOH HOH . L 5 HOH B 28 1128 9 HOH HOH . L 5 HOH B 29 1129 74 HOH HOH . L 5 HOH B 30 1130 36 HOH HOH . L 5 HOH B 31 1131 52 HOH HOH . L 5 HOH B 32 1132 79 HOH HOH . L 5 HOH B 33 1133 41 HOH HOH . L 5 HOH B 34 1134 28 HOH HOH . L 5 HOH B 35 1135 76 HOH HOH . L 5 HOH B 36 1136 65 HOH HOH . L 5 HOH B 37 1137 32 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . F 4 57.356 50.37 60.773 1 65.3 ? P PO4 1004 A 1 HETATM 2 O O1 PO4 . . . F 4 57.51 51.384 59.621 1 58.54 ? O1 PO4 1004 A 1 HETATM 3 O O2 PO4 . . . F 4 58.276 50.557 61.961 1 74.67 ? O2 PO4 1004 A 1 HETATM 4 O O3 PO4 . . . F 4 57.831 49.024 60.247 1 87.06 ? O3 PO4 1004 A 1 HETATM 5 O O4 PO4 . . . F 4 55.93 50.28 61.277 1 72.1 ? O4 PO4 1004 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #