data_6K67 # _model_server_result.job_id nWwnh0EUwNcBiRWrjIHsIQ _model_server_result.datetime_utc '2024-12-21 13:23:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6k67 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":102}' # _entry.id 6K67 # _exptl.entry_id 6K67 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6K67 _cell.length_a 115.298 _cell.length_b 115.298 _cell.length_c 93.275 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6K67 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD1 ASP 44 B ASP 27 1_555 F CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc2 B OD1 ASP 48 B ASP 31 1_555 F CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc3 B O THR 50 B THR 33 1_555 F CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc4 B OE1 GLU 55 B GLU 38 1_555 F CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? metalc ? metalc5 B OE2 GLU 55 B GLU 38 1_555 F CA CA . B CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc6 B OD1 ASP 80 B ASP 63 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.161 ? metalc ? metalc7 B OD1 ASP 82 B ASP 65 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc8 B OD1 ASN 84 B ASN 67 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc9 B O THR 86 B THR 69 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc10 B OE1 GLU 91 B GLU 74 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc11 B OE2 GLU 91 B GLU 74 1_555 E CA CA . B CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.567 ? metalc ? metalc12 F CA CA . B CA 102 1_555 J O HOH . B HOH 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? metalc ? metalc13 D OD1 ASP 44 D ASP 27 1_555 H CA CA . D CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc14 D OD1 ASP 46 D ASP 29 1_555 H CA CA . D CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc15 D O THR 50 D THR 33 1_555 H CA CA . D CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc16 D OE1 GLU 55 D GLU 38 1_555 H CA CA . D CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc17 D OE2 GLU 55 D GLU 38 1_555 H CA CA . D CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc18 D OD1 ASP 80 D ASP 63 1_555 G CA CA . D CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc19 D OD1 ASP 82 D ASP 65 1_555 G CA CA . D CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc20 D OD1 ASN 84 D ASN 67 1_555 G CA CA . D CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.867 ? metalc ? metalc21 D O THR 86 D THR 69 1_555 G CA CA . D CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc22 D OE1 GLU 91 D GLU 74 1_555 G CA CA . D CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc23 D OE2 GLU 91 D GLU 74 1_555 G CA CA . D CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.492 ? metalc ? metalc24 H CA CA . D CA 102 1_555 L O HOH . D HOH 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.586 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6K67 _atom_sites.fract_transf_matrix[1][1] 0.008673 _atom_sites.fract_transf_matrix[1][2] 0.005007 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010015 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010721 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 CA B 1 101 222 CA CA . F 3 CA B 1 102 223 CA CA . G 3 CA D 1 101 224 CA CA . H 3 CA D 1 102 225 CA CA . I 4 HOH A 1 201 183 HOH HOH . I 4 HOH A 2 202 85 HOH HOH . I 4 HOH A 3 203 29 HOH HOH . I 4 HOH A 4 204 10 HOH HOH . I 4 HOH A 5 205 165 HOH HOH . I 4 HOH A 6 206 26 HOH HOH . I 4 HOH A 7 207 159 HOH HOH . I 4 HOH A 8 208 31 HOH HOH . I 4 HOH A 9 209 75 HOH HOH . I 4 HOH A 10 210 14 HOH HOH . I 4 HOH A 11 211 218 HOH HOH . I 4 HOH A 12 212 4 HOH HOH . I 4 HOH A 13 213 12 HOH HOH . I 4 HOH A 14 214 189 HOH HOH . I 4 HOH A 15 215 38 HOH HOH . I 4 HOH A 16 216 40 HOH HOH . I 4 HOH A 17 217 60 HOH HOH . I 4 HOH A 18 218 3 HOH HOH . I 4 HOH A 19 219 72 HOH HOH . I 4 HOH A 20 220 22 HOH HOH . I 4 HOH A 21 221 77 HOH HOH . I 4 HOH A 22 222 211 HOH HOH . I 4 HOH A 23 223 109 HOH HOH . I 4 HOH A 24 224 8 HOH HOH . I 4 HOH A 25 225 202 HOH HOH . I 4 HOH A 26 226 66 HOH HOH . I 4 HOH A 27 227 21 HOH HOH . I 4 HOH A 28 228 232 HOH HOH . I 4 HOH A 29 229 65 HOH HOH . I 4 HOH A 30 230 80 HOH HOH . I 4 HOH A 31 231 146 HOH HOH . I 4 HOH A 32 232 141 HOH HOH . I 4 HOH A 33 233 46 HOH HOH . I 4 HOH A 34 234 151 HOH HOH . I 4 HOH A 35 235 114 HOH HOH . I 4 HOH A 36 236 23 HOH HOH . I 4 HOH A 37 237 157 HOH HOH . I 4 HOH A 38 238 76 HOH HOH . I 4 HOH A 39 239 58 HOH HOH . I 4 HOH A 40 240 28 HOH HOH . I 4 HOH A 41 241 15 HOH HOH . I 4 HOH A 42 242 130 HOH HOH . I 4 HOH A 43 243 41 HOH HOH . I 4 HOH A 44 244 42 HOH HOH . I 4 HOH A 45 245 160 HOH HOH . I 4 HOH A 46 246 203 HOH HOH . I 4 HOH A 47 247 169 HOH HOH . I 4 HOH A 48 248 175 HOH HOH . I 4 HOH A 49 249 13 HOH HOH . I 4 HOH A 50 250 128 HOH HOH . I 4 HOH A 51 251 53 HOH HOH . I 4 HOH A 52 252 187 HOH HOH . I 4 HOH A 53 253 129 HOH HOH . I 4 HOH A 54 254 140 HOH HOH . I 4 HOH A 55 255 170 HOH HOH . I 4 HOH A 56 256 52 HOH HOH . I 4 HOH A 57 257 236 HOH HOH . I 4 HOH A 58 258 84 HOH HOH . I 4 HOH A 59 259 118 HOH HOH . I 4 HOH A 60 260 93 HOH HOH . I 4 HOH A 61 261 180 HOH HOH . I 4 HOH A 62 262 62 HOH HOH . I 4 HOH A 63 263 194 HOH HOH . I 4 HOH A 64 264 83 HOH HOH . I 4 HOH A 65 265 48 HOH HOH . I 4 HOH A 66 266 70 HOH HOH . I 4 HOH A 67 267 25 HOH HOH . I 4 HOH A 68 268 207 HOH HOH . I 4 HOH A 69 269 32 HOH HOH . I 4 HOH A 70 270 200 HOH HOH . I 4 HOH A 71 271 54 HOH HOH . I 4 HOH A 72 272 61 HOH HOH . I 4 HOH A 73 273 136 HOH HOH . I 4 HOH A 74 274 108 HOH HOH . I 4 HOH A 75 275 30 HOH HOH . I 4 HOH A 76 276 123 HOH HOH . I 4 HOH A 77 277 106 HOH HOH . I 4 HOH A 78 278 164 HOH HOH . I 4 HOH A 79 279 188 HOH HOH . I 4 HOH A 80 280 178 HOH HOH . I 4 HOH A 81 281 150 HOH HOH . I 4 HOH A 82 282 133 HOH HOH . I 4 HOH A 83 283 102 HOH HOH . I 4 HOH A 84 284 214 HOH HOH . I 4 HOH A 85 285 238 HOH HOH . I 4 HOH A 86 286 177 HOH HOH . I 4 HOH A 87 287 185 HOH HOH . I 4 HOH A 88 288 171 HOH HOH . I 4 HOH A 89 289 184 HOH HOH . I 4 HOH A 90 290 50 HOH HOH . I 4 HOH A 91 291 155 HOH HOH . J 4 HOH B 1 201 234 HOH HOH . J 4 HOH B 2 202 163 HOH HOH . J 4 HOH B 3 203 104 HOH HOH . J 4 HOH B 4 204 134 HOH HOH . J 4 HOH B 5 205 152 HOH HOH . J 4 HOH B 6 206 201 HOH HOH . J 4 HOH B 7 207 224 HOH HOH . J 4 HOH B 8 208 99 HOH HOH . J 4 HOH B 9 209 107 HOH HOH . J 4 HOH B 10 210 79 HOH HOH . J 4 HOH B 11 211 181 HOH HOH . J 4 HOH B 12 212 82 HOH HOH . J 4 HOH B 13 213 47 HOH HOH . J 4 HOH B 14 214 45 HOH HOH . J 4 HOH B 15 215 161 HOH HOH . J 4 HOH B 16 216 39 HOH HOH . J 4 HOH B 17 217 153 HOH HOH . J 4 HOH B 18 218 36 HOH HOH . J 4 HOH B 19 219 135 HOH HOH . J 4 HOH B 20 220 168 HOH HOH . J 4 HOH B 21 221 73 HOH HOH . J 4 HOH B 22 222 223 HOH HOH . J 4 HOH B 23 223 195 HOH HOH . J 4 HOH B 24 224 90 HOH HOH . J 4 HOH B 25 225 131 HOH HOH . J 4 HOH B 26 226 126 HOH HOH . J 4 HOH B 27 227 132 HOH HOH . J 4 HOH B 28 228 176 HOH HOH . J 4 HOH B 29 229 144 HOH HOH . J 4 HOH B 30 230 89 HOH HOH . J 4 HOH B 31 231 120 HOH HOH . J 4 HOH B 32 232 110 HOH HOH . J 4 HOH B 33 233 212 HOH HOH . J 4 HOH B 34 234 192 HOH HOH . J 4 HOH B 35 235 198 HOH HOH . J 4 HOH B 36 236 220 HOH HOH . J 4 HOH B 37 237 143 HOH HOH . J 4 HOH B 38 238 125 HOH HOH . J 4 HOH B 39 239 138 HOH HOH . J 4 HOH B 40 240 199 HOH HOH . J 4 HOH B 41 241 233 HOH HOH . K 4 HOH C 1 201 1 HOH HOH . K 4 HOH C 2 202 148 HOH HOH . K 4 HOH C 3 203 44 HOH HOH . K 4 HOH C 4 204 67 HOH HOH . K 4 HOH C 5 205 124 HOH HOH . K 4 HOH C 6 206 20 HOH HOH . K 4 HOH C 7 207 227 HOH HOH . K 4 HOH C 8 208 95 HOH HOH . K 4 HOH C 9 209 56 HOH HOH . K 4 HOH C 10 210 33 HOH HOH . K 4 HOH C 11 211 205 HOH HOH . K 4 HOH C 12 212 74 HOH HOH . K 4 HOH C 13 213 162 HOH HOH . K 4 HOH C 14 214 18 HOH HOH . K 4 HOH C 15 215 112 HOH HOH . K 4 HOH C 16 216 63 HOH HOH . K 4 HOH C 17 217 9 HOH HOH . K 4 HOH C 18 218 17 HOH HOH . K 4 HOH C 19 219 11 HOH HOH . K 4 HOH C 20 220 19 HOH HOH . K 4 HOH C 21 221 71 HOH HOH . K 4 HOH C 22 222 92 HOH HOH . K 4 HOH C 23 223 27 HOH HOH . K 4 HOH C 24 224 7 HOH HOH . K 4 HOH C 25 225 166 HOH HOH . K 4 HOH C 26 226 59 HOH HOH . K 4 HOH C 27 227 6 HOH HOH . K 4 HOH C 28 228 115 HOH HOH . K 4 HOH C 29 229 139 HOH HOH . K 4 HOH C 30 230 51 HOH HOH . K 4 HOH C 31 231 69 HOH HOH . K 4 HOH C 32 232 37 HOH HOH . K 4 HOH C 33 233 16 HOH HOH . K 4 HOH C 34 234 119 HOH HOH . K 4 HOH C 35 235 24 HOH HOH . K 4 HOH C 36 236 88 HOH HOH . K 4 HOH C 37 237 231 HOH HOH . K 4 HOH C 38 238 5 HOH HOH . K 4 HOH C 39 239 87 HOH HOH . K 4 HOH C 40 240 101 HOH HOH . K 4 HOH C 41 241 55 HOH HOH . K 4 HOH C 42 242 49 HOH HOH . K 4 HOH C 43 243 94 HOH HOH . K 4 HOH C 44 244 103 HOH HOH . K 4 HOH C 45 245 97 HOH HOH . K 4 HOH C 46 246 91 HOH HOH . K 4 HOH C 47 247 35 HOH HOH . K 4 HOH C 48 248 100 HOH HOH . K 4 HOH C 49 249 57 HOH HOH . K 4 HOH C 50 250 204 HOH HOH . K 4 HOH C 51 251 237 HOH HOH . K 4 HOH C 52 252 206 HOH HOH . K 4 HOH C 53 253 34 HOH HOH . K 4 HOH C 54 254 137 HOH HOH . K 4 HOH C 55 255 217 HOH HOH . K 4 HOH C 56 256 191 HOH HOH . K 4 HOH C 57 257 174 HOH HOH . K 4 HOH C 58 258 145 HOH HOH . K 4 HOH C 59 259 64 HOH HOH . K 4 HOH C 60 260 105 HOH HOH . K 4 HOH C 61 261 196 HOH HOH . K 4 HOH C 62 262 219 HOH HOH . K 4 HOH C 63 263 197 HOH HOH . K 4 HOH C 64 264 156 HOH HOH . K 4 HOH C 65 265 226 HOH HOH . K 4 HOH C 66 266 117 HOH HOH . K 4 HOH C 67 267 142 HOH HOH . K 4 HOH C 68 268 113 HOH HOH . K 4 HOH C 69 269 78 HOH HOH . K 4 HOH C 70 270 208 HOH HOH . K 4 HOH C 71 271 221 HOH HOH . K 4 HOH C 72 272 235 HOH HOH . K 4 HOH C 73 273 154 HOH HOH . L 4 HOH D 1 201 111 HOH HOH . L 4 HOH D 2 202 2 HOH HOH . L 4 HOH D 3 203 230 HOH HOH . L 4 HOH D 4 204 179 HOH HOH . L 4 HOH D 5 205 121 HOH HOH . L 4 HOH D 6 206 149 HOH HOH . L 4 HOH D 7 207 96 HOH HOH . L 4 HOH D 8 208 68 HOH HOH . L 4 HOH D 9 209 182 HOH HOH . L 4 HOH D 10 210 229 HOH HOH . L 4 HOH D 11 211 98 HOH HOH . L 4 HOH D 12 212 167 HOH HOH . L 4 HOH D 13 213 43 HOH HOH . L 4 HOH D 14 214 216 HOH HOH . L 4 HOH D 15 215 122 HOH HOH . L 4 HOH D 16 216 210 HOH HOH . L 4 HOH D 17 217 190 HOH HOH . L 4 HOH D 18 218 86 HOH HOH . L 4 HOH D 19 219 173 HOH HOH . L 4 HOH D 20 220 209 HOH HOH . L 4 HOH D 21 221 172 HOH HOH . L 4 HOH D 22 222 215 HOH HOH . L 4 HOH D 23 223 213 HOH HOH . L 4 HOH D 24 224 186 HOH HOH . L 4 HOH D 25 225 222 HOH HOH . L 4 HOH D 26 226 81 HOH HOH . L 4 HOH D 27 227 147 HOH HOH . L 4 HOH D 28 228 158 HOH HOH . L 4 HOH D 29 229 193 HOH HOH . L 4 HOH D 30 230 127 HOH HOH . L 4 HOH D 31 231 116 HOH HOH . L 4 HOH D 32 232 228 HOH HOH . L 4 HOH D 33 233 225 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 3 _atom_site.Cartn_x 97.406 _atom_site.Cartn_y 90.928 _atom_site.Cartn_z 4.857 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 49.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 102 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #