data_6K85 # _model_server_result.job_id ZAPS0t_Awxs_wG7FARORsw _model_server_result.datetime_utc '2025-08-31 14:07:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6k85 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 6K85 # _exptl.entry_id 6K85 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6K85 _cell.length_a 45.692 _cell.length_b 72.871 _cell.length_c 79.444 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6K85 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 46 B THR 164 1_555 B MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc2 A OG SER 48 B SER 166 1_555 B MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc3 A OD1 ASP 87 B ASP 205 1_555 C MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc4 A OD1 ASP 89 B ASP 207 1_555 C MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc5 A OD1 ASP 168 B ASP 286 1_555 B MG MG . B MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc6 B MG MG . B MG 501 1_555 D O HOH . B HOH 641 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc7 B MG MG . B MG 501 1_555 D O HOH . B HOH 722 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc8 B MG MG . B MG 501 1_555 D O HOH . B HOH 737 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc9 C MG MG . B MG 502 1_555 D O HOH . B HOH 628 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc10 C MG MG . B MG 502 1_555 D O HOH . B HOH 657 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc11 C MG MG . B MG 502 1_555 D O HOH . B HOH 695 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc12 C MG MG . B MG 502 1_555 D O HOH . B HOH 709 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6K85 _atom_sites.fract_transf_matrix[1][1] 0.021886 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013723 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012587 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG B 1 501 1 MG MG . C 2 MG B 1 502 2 MG MG . D 3 HOH B 1 601 107 HOH HOH . D 3 HOH B 2 602 102 HOH HOH . D 3 HOH B 3 603 95 HOH HOH . D 3 HOH B 4 604 48 HOH HOH . D 3 HOH B 5 605 163 HOH HOH . D 3 HOH B 6 606 101 HOH HOH . D 3 HOH B 7 607 70 HOH HOH . D 3 HOH B 8 608 55 HOH HOH . D 3 HOH B 9 609 154 HOH HOH . D 3 HOH B 10 610 23 HOH HOH . D 3 HOH B 11 611 151 HOH HOH . D 3 HOH B 12 612 53 HOH HOH . D 3 HOH B 13 613 121 HOH HOH . D 3 HOH B 14 614 83 HOH HOH . D 3 HOH B 15 615 162 HOH HOH . D 3 HOH B 16 616 99 HOH HOH . D 3 HOH B 17 617 108 HOH HOH . D 3 HOH B 18 618 138 HOH HOH . D 3 HOH B 19 619 88 HOH HOH . D 3 HOH B 20 620 47 HOH HOH . D 3 HOH B 21 621 166 HOH HOH . D 3 HOH B 22 622 78 HOH HOH . D 3 HOH B 23 623 64 HOH HOH . D 3 HOH B 24 624 141 HOH HOH . D 3 HOH B 25 625 148 HOH HOH . D 3 HOH B 26 626 5 HOH HOH . D 3 HOH B 27 627 58 HOH HOH . D 3 HOH B 28 628 1 HOH HOH . D 3 HOH B 29 629 155 HOH HOH . D 3 HOH B 30 630 103 HOH HOH . D 3 HOH B 31 631 122 HOH HOH . D 3 HOH B 32 632 87 HOH HOH . D 3 HOH B 33 633 117 HOH HOH . D 3 HOH B 34 634 65 HOH HOH . D 3 HOH B 35 635 73 HOH HOH . D 3 HOH B 36 636 8 HOH HOH . D 3 HOH B 37 637 90 HOH HOH . D 3 HOH B 38 638 59 HOH HOH . D 3 HOH B 39 639 127 HOH HOH . D 3 HOH B 40 640 113 HOH HOH . D 3 HOH B 41 641 3 HOH HOH . D 3 HOH B 42 642 43 HOH HOH . D 3 HOH B 43 643 21 HOH HOH . D 3 HOH B 44 644 77 HOH HOH . D 3 HOH B 45 645 176 HOH HOH . D 3 HOH B 46 646 118 HOH HOH . D 3 HOH B 47 647 63 HOH HOH . D 3 HOH B 48 648 12 HOH HOH . D 3 HOH B 49 649 96 HOH HOH . D 3 HOH B 50 650 97 HOH HOH . D 3 HOH B 51 651 135 HOH HOH . D 3 HOH B 52 652 165 HOH HOH . D 3 HOH B 53 653 72 HOH HOH . D 3 HOH B 54 654 11 HOH HOH . D 3 HOH B 55 655 84 HOH HOH . D 3 HOH B 56 656 115 HOH HOH . D 3 HOH B 57 657 7 HOH HOH . D 3 HOH B 58 658 157 HOH HOH . D 3 HOH B 59 659 26 HOH HOH . D 3 HOH B 60 660 147 HOH HOH . D 3 HOH B 61 661 69 HOH HOH . D 3 HOH B 62 662 36 HOH HOH . D 3 HOH B 63 663 112 HOH HOH . D 3 HOH B 64 664 130 HOH HOH . D 3 HOH B 65 665 46 HOH HOH . D 3 HOH B 66 666 17 HOH HOH . D 3 HOH B 67 667 168 HOH HOH . D 3 HOH B 68 668 143 HOH HOH . D 3 HOH B 69 669 14 HOH HOH . D 3 HOH B 70 670 52 HOH HOH . D 3 HOH B 71 671 137 HOH HOH . D 3 HOH B 72 672 49 HOH HOH . D 3 HOH B 73 673 18 HOH HOH . D 3 HOH B 74 674 71 HOH HOH . D 3 HOH B 75 675 28 HOH HOH . D 3 HOH B 76 676 109 HOH HOH . D 3 HOH B 77 677 4 HOH HOH . D 3 HOH B 78 678 31 HOH HOH . D 3 HOH B 79 679 100 HOH HOH . D 3 HOH B 80 680 39 HOH HOH . D 3 HOH B 81 681 89 HOH HOH . D 3 HOH B 82 682 98 HOH HOH . D 3 HOH B 83 683 40 HOH HOH . D 3 HOH B 84 684 93 HOH HOH . D 3 HOH B 85 685 56 HOH HOH . D 3 HOH B 86 686 104 HOH HOH . D 3 HOH B 87 687 13 HOH HOH . D 3 HOH B 88 688 20 HOH HOH . D 3 HOH B 89 689 94 HOH HOH . D 3 HOH B 90 690 41 HOH HOH . D 3 HOH B 91 691 171 HOH HOH . D 3 HOH B 92 692 30 HOH HOH . D 3 HOH B 93 693 175 HOH HOH . D 3 HOH B 94 694 2 HOH HOH . D 3 HOH B 95 695 6 HOH HOH . D 3 HOH B 96 696 133 HOH HOH . D 3 HOH B 97 697 85 HOH HOH . D 3 HOH B 98 698 51 HOH HOH . D 3 HOH B 99 699 111 HOH HOH . D 3 HOH B 100 700 110 HOH HOH . D 3 HOH B 101 701 152 HOH HOH . D 3 HOH B 102 702 156 HOH HOH . D 3 HOH B 103 703 116 HOH HOH . D 3 HOH B 104 704 92 HOH HOH . D 3 HOH B 105 705 38 HOH HOH . D 3 HOH B 106 706 172 HOH HOH . D 3 HOH B 107 707 79 HOH HOH . D 3 HOH B 108 708 134 HOH HOH . D 3 HOH B 109 709 10 HOH HOH . D 3 HOH B 110 710 86 HOH HOH . D 3 HOH B 111 711 9 HOH HOH . D 3 HOH B 112 712 146 HOH HOH . D 3 HOH B 113 713 62 HOH HOH . D 3 HOH B 114 714 50 HOH HOH . D 3 HOH B 115 715 136 HOH HOH . D 3 HOH B 116 716 82 HOH HOH . D 3 HOH B 117 717 140 HOH HOH . D 3 HOH B 118 718 81 HOH HOH . D 3 HOH B 119 719 76 HOH HOH . D 3 HOH B 120 720 68 HOH HOH . D 3 HOH B 121 721 57 HOH HOH . D 3 HOH B 122 722 24 HOH HOH . D 3 HOH B 123 723 106 HOH HOH . D 3 HOH B 124 724 54 HOH HOH . D 3 HOH B 125 725 27 HOH HOH . D 3 HOH B 126 726 114 HOH HOH . D 3 HOH B 127 727 120 HOH HOH . D 3 HOH B 128 728 67 HOH HOH . D 3 HOH B 129 729 131 HOH HOH . D 3 HOH B 130 730 66 HOH HOH . D 3 HOH B 131 731 29 HOH HOH . D 3 HOH B 132 732 153 HOH HOH . D 3 HOH B 133 733 80 HOH HOH . D 3 HOH B 134 734 19 HOH HOH . D 3 HOH B 135 735 149 HOH HOH . D 3 HOH B 136 736 37 HOH HOH . D 3 HOH B 137 737 35 HOH HOH . D 3 HOH B 138 738 22 HOH HOH . D 3 HOH B 139 739 34 HOH HOH . D 3 HOH B 140 740 128 HOH HOH . D 3 HOH B 141 741 119 HOH HOH . D 3 HOH B 142 742 15 HOH HOH . D 3 HOH B 143 743 164 HOH HOH . D 3 HOH B 144 744 124 HOH HOH . D 3 HOH B 145 745 173 HOH HOH . D 3 HOH B 146 746 61 HOH HOH . D 3 HOH B 147 747 139 HOH HOH . D 3 HOH B 148 748 33 HOH HOH . D 3 HOH B 149 749 167 HOH HOH . D 3 HOH B 150 750 144 HOH HOH . D 3 HOH B 151 751 126 HOH HOH . D 3 HOH B 152 752 105 HOH HOH . D 3 HOH B 153 753 158 HOH HOH . D 3 HOH B 154 754 169 HOH HOH . D 3 HOH B 155 755 129 HOH HOH . D 3 HOH B 156 756 142 HOH HOH . D 3 HOH B 157 757 145 HOH HOH . D 3 HOH B 158 758 16 HOH HOH . D 3 HOH B 159 759 132 HOH HOH . D 3 HOH B 160 760 125 HOH HOH . D 3 HOH B 161 761 123 HOH HOH . D 3 HOH B 162 762 32 HOH HOH . D 3 HOH B 163 763 25 HOH HOH . D 3 HOH B 164 764 60 HOH HOH . D 3 HOH B 165 765 45 HOH HOH . D 3 HOH B 166 766 91 HOH HOH . D 3 HOH B 167 767 150 HOH HOH . D 3 HOH B 168 768 75 HOH HOH . D 3 HOH B 169 769 159 HOH HOH . D 3 HOH B 170 770 161 HOH HOH . D 3 HOH B 171 771 44 HOH HOH . D 3 HOH B 172 772 160 HOH HOH . D 3 HOH B 173 773 74 HOH HOH . D 3 HOH B 174 774 170 HOH HOH . D 3 HOH B 175 775 42 HOH HOH . D 3 HOH B 176 776 174 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 11.8 _atom_site.Cartn_y -25.489 _atom_site.Cartn_z -19.52 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 26.59 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 501 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 387 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #