data_6K8M # _model_server_result.job_id 057yZ5uFUiN05wDqS9-vSw _model_server_result.datetime_utc '2024-11-05 04:35:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6k8m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6K8M # _exptl.entry_id 6K8M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 76.121 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description THIOUREA _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6K8M _cell.length_a 67.842 _cell.length_b 67.842 _cell.length_c 102.377 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6K8M _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 34 E CYS 34 1_555 A SG CYS 123 E CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 178 E CYS 178 1_555 A SG CYS 249 E CYS 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? # _chem_comp.formula 'C H4 N2 S' _chem_comp.formula_weight 76.121 _chem_comp.id TOU _chem_comp.mon_nstd_flag . _chem_comp.name THIOUREA _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C S TOU doub 310 n n C N1 TOU sing 311 n n C N2 TOU sing 312 n n N1 HN11 TOU sing 313 n n N1 HN12 TOU sing 314 n n N2 HN21 TOU sing 315 n n N2 HN22 TOU sing 316 n n # _atom_sites.entry_id 6K8M _atom_sites.fract_transf_matrix[1][1] 0.01474 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01474 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009768 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TOU E 1 301 1 TOU TOU . C 2 TOU E 1 302 2 TOU TOU . D 2 TOU E 1 303 3 TOU TOU . E 3 SO4 E 1 304 1 SO4 SO4 . F 4 CL E 1 305 1 CL CL . G 5 HOH E 1 401 215 HOH HOH . G 5 HOH E 2 402 216 HOH HOH . G 5 HOH E 3 403 231 HOH HOH . G 5 HOH E 4 404 235 HOH HOH . G 5 HOH E 5 405 217 HOH HOH . G 5 HOH E 6 406 142 HOH HOH . G 5 HOH E 7 407 52 HOH HOH . G 5 HOH E 8 408 208 HOH HOH . G 5 HOH E 9 409 223 HOH HOH . G 5 HOH E 10 410 114 HOH HOH . G 5 HOH E 11 411 81 HOH HOH . G 5 HOH E 12 412 234 HOH HOH . G 5 HOH E 13 413 152 HOH HOH . G 5 HOH E 14 414 58 HOH HOH . G 5 HOH E 15 415 165 HOH HOH . G 5 HOH E 16 416 39 HOH HOH . G 5 HOH E 17 417 40 HOH HOH . G 5 HOH E 18 418 7 HOH HOH . G 5 HOH E 19 419 66 HOH HOH . G 5 HOH E 20 420 28 HOH HOH . G 5 HOH E 21 421 51 HOH HOH . G 5 HOH E 22 422 16 HOH HOH . G 5 HOH E 23 423 70 HOH HOH . G 5 HOH E 24 424 94 HOH HOH . G 5 HOH E 25 425 68 HOH HOH . G 5 HOH E 26 426 178 HOH HOH . G 5 HOH E 27 427 120 HOH HOH . G 5 HOH E 28 428 167 HOH HOH . G 5 HOH E 29 429 138 HOH HOH . G 5 HOH E 30 430 98 HOH HOH . G 5 HOH E 31 431 21 HOH HOH . G 5 HOH E 32 432 9 HOH HOH . G 5 HOH E 33 433 210 HOH HOH . G 5 HOH E 34 434 31 HOH HOH . G 5 HOH E 35 435 174 HOH HOH . G 5 HOH E 36 436 67 HOH HOH . G 5 HOH E 37 437 92 HOH HOH . G 5 HOH E 38 438 123 HOH HOH . G 5 HOH E 39 439 5 HOH HOH . G 5 HOH E 40 440 186 HOH HOH . G 5 HOH E 41 441 12 HOH HOH . G 5 HOH E 42 442 30 HOH HOH . G 5 HOH E 43 443 90 HOH HOH . G 5 HOH E 44 444 107 HOH HOH . G 5 HOH E 45 445 88 HOH HOH . G 5 HOH E 46 446 23 HOH HOH . G 5 HOH E 47 447 93 HOH HOH . G 5 HOH E 48 448 45 HOH HOH . G 5 HOH E 49 449 32 HOH HOH . G 5 HOH E 50 450 164 HOH HOH . G 5 HOH E 51 451 132 HOH HOH . G 5 HOH E 52 452 18 HOH HOH . G 5 HOH E 53 453 153 HOH HOH . G 5 HOH E 54 454 38 HOH HOH . G 5 HOH E 55 455 102 HOH HOH . G 5 HOH E 56 456 139 HOH HOH . G 5 HOH E 57 457 91 HOH HOH . G 5 HOH E 58 458 125 HOH HOH . G 5 HOH E 59 459 229 HOH HOH . G 5 HOH E 60 460 131 HOH HOH . G 5 HOH E 61 461 230 HOH HOH . G 5 HOH E 62 462 185 HOH HOH . G 5 HOH E 63 463 147 HOH HOH . G 5 HOH E 64 464 214 HOH HOH . G 5 HOH E 65 465 85 HOH HOH . G 5 HOH E 66 466 143 HOH HOH . G 5 HOH E 67 467 127 HOH HOH . G 5 HOH E 68 468 170 HOH HOH . G 5 HOH E 69 469 53 HOH HOH . G 5 HOH E 70 470 14 HOH HOH . G 5 HOH E 71 471 29 HOH HOH . G 5 HOH E 72 472 110 HOH HOH . G 5 HOH E 73 473 221 HOH HOH . G 5 HOH E 74 474 4 HOH HOH . G 5 HOH E 75 475 187 HOH HOH . G 5 HOH E 76 476 78 HOH HOH . G 5 HOH E 77 477 76 HOH HOH . G 5 HOH E 78 478 6 HOH HOH . G 5 HOH E 79 479 57 HOH HOH . G 5 HOH E 80 480 60 HOH HOH . G 5 HOH E 81 481 42 HOH HOH . G 5 HOH E 82 482 97 HOH HOH . G 5 HOH E 83 483 33 HOH HOH . G 5 HOH E 84 484 2 HOH HOH . G 5 HOH E 85 485 175 HOH HOH . G 5 HOH E 86 486 148 HOH HOH . G 5 HOH E 87 487 37 HOH HOH . G 5 HOH E 88 488 1 HOH HOH . G 5 HOH E 89 489 22 HOH HOH . G 5 HOH E 90 490 156 HOH HOH . G 5 HOH E 91 491 163 HOH HOH . G 5 HOH E 92 492 137 HOH HOH . G 5 HOH E 93 493 62 HOH HOH . G 5 HOH E 94 494 119 HOH HOH . G 5 HOH E 95 495 79 HOH HOH . G 5 HOH E 96 496 82 HOH HOH . G 5 HOH E 97 497 75 HOH HOH . G 5 HOH E 98 498 3 HOH HOH . G 5 HOH E 99 499 157 HOH HOH . G 5 HOH E 100 500 166 HOH HOH . G 5 HOH E 101 501 49 HOH HOH . G 5 HOH E 102 502 47 HOH HOH . G 5 HOH E 103 503 27 HOH HOH . G 5 HOH E 104 504 105 HOH HOH . G 5 HOH E 105 505 77 HOH HOH . G 5 HOH E 106 506 8 HOH HOH . G 5 HOH E 107 507 99 HOH HOH . G 5 HOH E 108 508 11 HOH HOH . G 5 HOH E 109 509 46 HOH HOH . G 5 HOH E 110 510 73 HOH HOH . G 5 HOH E 111 511 86 HOH HOH . G 5 HOH E 112 512 135 HOH HOH . G 5 HOH E 113 513 15 HOH HOH . G 5 HOH E 114 514 227 HOH HOH . G 5 HOH E 115 515 63 HOH HOH . G 5 HOH E 116 516 69 HOH HOH . G 5 HOH E 117 517 158 HOH HOH . G 5 HOH E 118 518 54 HOH HOH . G 5 HOH E 119 519 103 HOH HOH . G 5 HOH E 120 520 149 HOH HOH . G 5 HOH E 121 521 193 HOH HOH . G 5 HOH E 122 522 218 HOH HOH . G 5 HOH E 123 523 89 HOH HOH . G 5 HOH E 124 524 10 HOH HOH . G 5 HOH E 125 525 141 HOH HOH . G 5 HOH E 126 526 161 HOH HOH . G 5 HOH E 127 527 108 HOH HOH . G 5 HOH E 128 528 20 HOH HOH . G 5 HOH E 129 529 84 HOH HOH . G 5 HOH E 130 530 26 HOH HOH . G 5 HOH E 131 531 112 HOH HOH . G 5 HOH E 132 532 134 HOH HOH . G 5 HOH E 133 533 17 HOH HOH . G 5 HOH E 134 534 181 HOH HOH . G 5 HOH E 135 535 116 HOH HOH . G 5 HOH E 136 536 226 HOH HOH . G 5 HOH E 137 537 171 HOH HOH . G 5 HOH E 138 538 126 HOH HOH . G 5 HOH E 139 539 43 HOH HOH . G 5 HOH E 140 540 232 HOH HOH . G 5 HOH E 141 541 101 HOH HOH . G 5 HOH E 142 542 180 HOH HOH . G 5 HOH E 143 543 59 HOH HOH . G 5 HOH E 144 544 109 HOH HOH . G 5 HOH E 145 545 173 HOH HOH . G 5 HOH E 146 546 44 HOH HOH . G 5 HOH E 147 547 56 HOH HOH . G 5 HOH E 148 548 80 HOH HOH . G 5 HOH E 149 549 160 HOH HOH . G 5 HOH E 150 550 24 HOH HOH . G 5 HOH E 151 551 220 HOH HOH . G 5 HOH E 152 552 140 HOH HOH . G 5 HOH E 153 553 25 HOH HOH . G 5 HOH E 154 554 144 HOH HOH . G 5 HOH E 155 555 172 HOH HOH . G 5 HOH E 156 556 50 HOH HOH . G 5 HOH E 157 557 55 HOH HOH . G 5 HOH E 158 558 41 HOH HOH . G 5 HOH E 159 559 13 HOH HOH . G 5 HOH E 160 560 48 HOH HOH . G 5 HOH E 161 561 71 HOH HOH . G 5 HOH E 162 562 72 HOH HOH . G 5 HOH E 163 563 124 HOH HOH . G 5 HOH E 164 564 200 HOH HOH . G 5 HOH E 165 565 188 HOH HOH . G 5 HOH E 166 566 35 HOH HOH . G 5 HOH E 167 567 100 HOH HOH . G 5 HOH E 168 568 36 HOH HOH . G 5 HOH E 169 569 87 HOH HOH . G 5 HOH E 170 570 192 HOH HOH . G 5 HOH E 171 571 233 HOH HOH . G 5 HOH E 172 572 61 HOH HOH . G 5 HOH E 173 573 19 HOH HOH . G 5 HOH E 174 574 133 HOH HOH . G 5 HOH E 175 575 65 HOH HOH . G 5 HOH E 176 576 115 HOH HOH . G 5 HOH E 177 577 122 HOH HOH . G 5 HOH E 178 578 96 HOH HOH . G 5 HOH E 179 579 162 HOH HOH . G 5 HOH E 180 580 121 HOH HOH . G 5 HOH E 181 581 128 HOH HOH . G 5 HOH E 182 582 34 HOH HOH . G 5 HOH E 183 583 104 HOH HOH . G 5 HOH E 184 584 83 HOH HOH . G 5 HOH E 185 585 118 HOH HOH . G 5 HOH E 186 586 222 HOH HOH . G 5 HOH E 187 587 209 HOH HOH . G 5 HOH E 188 588 189 HOH HOH . G 5 HOH E 189 589 169 HOH HOH . G 5 HOH E 190 590 205 HOH HOH . G 5 HOH E 191 591 106 HOH HOH . G 5 HOH E 192 592 177 HOH HOH . G 5 HOH E 193 593 179 HOH HOH . G 5 HOH E 194 594 199 HOH HOH . G 5 HOH E 195 595 154 HOH HOH . G 5 HOH E 196 596 145 HOH HOH . G 5 HOH E 197 597 211 HOH HOH . G 5 HOH E 198 598 197 HOH HOH . G 5 HOH E 199 599 202 HOH HOH . G 5 HOH E 200 600 190 HOH HOH . G 5 HOH E 201 601 201 HOH HOH . G 5 HOH E 202 602 228 HOH HOH . G 5 HOH E 203 603 212 HOH HOH . G 5 HOH E 204 604 206 HOH HOH . G 5 HOH E 205 605 204 HOH HOH . G 5 HOH E 206 606 151 HOH HOH . G 5 HOH E 207 607 95 HOH HOH . G 5 HOH E 208 608 213 HOH HOH . G 5 HOH E 209 609 155 HOH HOH . G 5 HOH E 210 610 146 HOH HOH . G 5 HOH E 211 611 130 HOH HOH . G 5 HOH E 212 612 113 HOH HOH . G 5 HOH E 213 613 117 HOH HOH . G 5 HOH E 214 614 136 HOH HOH . G 5 HOH E 215 615 198 HOH HOH . G 5 HOH E 216 616 176 HOH HOH . G 5 HOH E 217 617 64 HOH HOH . G 5 HOH E 218 618 191 HOH HOH . G 5 HOH E 219 619 184 HOH HOH . G 5 HOH E 220 620 168 HOH HOH . G 5 HOH E 221 621 182 HOH HOH . G 5 HOH E 222 622 111 HOH HOH . G 5 HOH E 223 623 183 HOH HOH . G 5 HOH E 224 624 224 HOH HOH . G 5 HOH E 225 625 207 HOH HOH . G 5 HOH E 226 626 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TOU . . . C 2 12.881 -1.644 7.998 1 15.81 ? C TOU 302 E 1 HETATM 2 S S TOU . . . C 2 12.24 -1.132 6.606 1 13.9 ? S TOU 302 E 1 HETATM 3 N N1 TOU . . . C 2 14.177 -1.662 8.316 1 16.18 ? N1 TOU 302 E 1 HETATM 4 N N2 TOU . . . C 2 12.06 -2.106 8.929 1 17.59 ? N2 TOU 302 E 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 350 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #