data_6K90 # _model_server_result.job_id XaDnI6mCna1AeJJTL1poAA _model_server_result.datetime_utc '2024-11-08 03:23:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6k90 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":604}' # _entry.id 6K90 # _exptl.entry_id 6K90 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.07 _cell.angle_gamma 90 _cell.entry_id 6K90 _cell.length_a 54.55 _cell.length_b 71.41 _cell.length_c 76.88 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6K90 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 M N N ? 4 N N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 144 A ASP 124 1_555 E CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc2 A OD1 ASP 144 A ASP 124 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? metalc ? metalc3 A OD2 ASP 144 A ASP 124 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc4 A OE2 GLU 156 A GLU 136 1_555 I CA CA . A CA 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc5 A O THR 163 A THR 143 1_555 H CA CA . A CA 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc6 A O GLY 200 A GLY 180 1_555 H CA CA . A CA 506 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.551 ? metalc ? metalc7 A O TYR 246 A TYR 226 1_555 E CA CA . A CA 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc8 A OD1 ASP 264 A ASP 244 1_555 I CA CA . A CA 507 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc9 D O1B ADP . A ADP 502 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc10 D O1A ADP . A ADP 502 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc11 D O3B ADP . A ADP 502 1_555 G CA CA . A CA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc12 F CA CA . A CA 504 1_555 J O3 PO4 . A PO4 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc13 B OD2 ASP 144 B ASP 124 1_555 M CA CA . B CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.63 ? metalc ? metalc14 B OD1 ASP 144 B ASP 124 1_555 N CA CA . B CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc15 B OD2 ASP 144 B ASP 124 1_555 N CA CA . B CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc16 B O TYR 246 B TYR 226 1_555 M CA CA . B CA 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc17 K O2B ADP . B ADP 601 1_555 N CA CA . B CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc18 K O2A ADP . B ADP 601 1_555 N CA CA . B CA 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? metalc ? metalc19 K O1B ADP . B ADP 601 1_555 O CA CA . B CA 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc20 N CA CA . B CA 604 1_555 Q O1 PO4 . B PO4 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6K90 _atom_sites.fract_transf_matrix[1][1] 0.018332 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002926 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014004 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013172 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PXM A 1 501 501 PXM PXM . D 3 ADP A 1 502 601 ADP ADP . E 4 CA A 1 503 3 CA CA . F 4 CA A 1 504 6 CA CA . G 4 CA A 1 505 7 CA CA . H 4 CA A 1 506 9 CA CA . I 4 CA A 1 507 10 CA CA . J 5 PO4 A 1 508 2 PO4 PO4 . K 3 ADP B 1 601 601 ADP ADP . L 2 PXM B 1 602 801 PXM PXM . M 4 CA B 1 603 4 CA CA . N 4 CA B 1 604 5 CA CA . O 4 CA B 1 605 8 CA CA . P 6 CL B 1 606 1 CL CL . Q 5 PO4 B 1 607 1 PO4 PO4 . R 7 HOH A 1 601 121 HOH HOH . R 7 HOH A 2 602 161 HOH HOH . R 7 HOH A 3 603 139 HOH HOH . R 7 HOH A 4 604 244 HOH HOH . R 7 HOH A 5 605 94 HOH HOH . R 7 HOH A 6 606 163 HOH HOH . R 7 HOH A 7 607 259 HOH HOH . R 7 HOH A 8 608 275 HOH HOH . R 7 HOH A 9 609 108 HOH HOH . R 7 HOH A 10 610 41 HOH HOH . R 7 HOH A 11 611 283 HOH HOH . R 7 HOH A 12 612 49 HOH HOH . R 7 HOH A 13 613 106 HOH HOH . R 7 HOH A 14 614 220 HOH HOH . R 7 HOH A 15 615 20 HOH HOH . R 7 HOH A 16 616 160 HOH HOH . R 7 HOH A 17 617 95 HOH HOH . R 7 HOH A 18 618 191 HOH HOH . R 7 HOH A 19 619 234 HOH HOH . R 7 HOH A 20 620 60 HOH HOH . R 7 HOH A 21 621 21 HOH HOH . R 7 HOH A 22 622 44 HOH HOH . R 7 HOH A 23 623 34 HOH HOH . R 7 HOH A 24 624 261 HOH HOH . R 7 HOH A 25 625 83 HOH HOH . R 7 HOH A 26 626 31 HOH HOH . R 7 HOH A 27 627 70 HOH HOH . R 7 HOH A 28 628 71 HOH HOH . R 7 HOH A 29 629 260 HOH HOH . R 7 HOH A 30 630 101 HOH HOH . R 7 HOH A 31 631 114 HOH HOH . R 7 HOH A 32 632 30 HOH HOH . R 7 HOH A 33 633 92 HOH HOH . R 7 HOH A 34 634 88 HOH HOH . R 7 HOH A 35 635 12 HOH HOH . R 7 HOH A 36 636 172 HOH HOH . R 7 HOH A 37 637 73 HOH HOH . R 7 HOH A 38 638 64 HOH HOH . R 7 HOH A 39 639 65 HOH HOH . R 7 HOH A 40 640 27 HOH HOH . R 7 HOH A 41 641 82 HOH HOH . R 7 HOH A 42 642 107 HOH HOH . R 7 HOH A 43 643 58 HOH HOH . R 7 HOH A 44 644 187 HOH HOH . R 7 HOH A 45 645 190 HOH HOH . R 7 HOH A 46 646 256 HOH HOH . R 7 HOH A 47 647 59 HOH HOH . R 7 HOH A 48 648 29 HOH HOH . R 7 HOH A 49 649 25 HOH HOH . R 7 HOH A 50 650 42 HOH HOH . R 7 HOH A 51 651 272 HOH HOH . R 7 HOH A 52 652 159 HOH HOH . R 7 HOH A 53 653 277 HOH HOH . R 7 HOH A 54 654 125 HOH HOH . R 7 HOH A 55 655 7 HOH HOH . R 7 HOH A 56 656 268 HOH HOH . R 7 HOH A 57 657 113 HOH HOH . R 7 HOH A 58 658 282 HOH HOH . R 7 HOH A 59 659 176 HOH HOH . R 7 HOH A 60 660 194 HOH HOH . R 7 HOH A 61 661 178 HOH HOH . R 7 HOH A 62 662 61 HOH HOH . R 7 HOH A 63 663 224 HOH HOH . R 7 HOH A 64 664 147 HOH HOH . R 7 HOH A 65 665 37 HOH HOH . R 7 HOH A 66 666 110 HOH HOH . R 7 HOH A 67 667 91 HOH HOH . R 7 HOH A 68 668 232 HOH HOH . R 7 HOH A 69 669 35 HOH HOH . R 7 HOH A 70 670 22 HOH HOH . R 7 HOH A 71 671 72 HOH HOH . R 7 HOH A 72 672 52 HOH HOH . R 7 HOH A 73 673 4 HOH HOH . R 7 HOH A 74 674 40 HOH HOH . R 7 HOH A 75 675 84 HOH HOH . R 7 HOH A 76 676 112 HOH HOH . R 7 HOH A 77 677 32 HOH HOH . R 7 HOH A 78 678 67 HOH HOH . R 7 HOH A 79 679 48 HOH HOH . R 7 HOH A 80 680 26 HOH HOH . R 7 HOH A 81 681 56 HOH HOH . R 7 HOH A 82 682 144 HOH HOH . R 7 HOH A 83 683 66 HOH HOH . R 7 HOH A 84 684 218 HOH HOH . R 7 HOH A 85 685 120 HOH HOH . R 7 HOH A 86 686 132 HOH HOH . R 7 HOH A 87 687 18 HOH HOH . R 7 HOH A 88 688 171 HOH HOH . R 7 HOH A 89 689 57 HOH HOH . R 7 HOH A 90 690 133 HOH HOH . R 7 HOH A 91 691 118 HOH HOH . R 7 HOH A 92 692 174 HOH HOH . R 7 HOH A 93 693 257 HOH HOH . R 7 HOH A 94 694 251 HOH HOH . R 7 HOH A 95 695 166 HOH HOH . R 7 HOH A 96 696 241 HOH HOH . R 7 HOH A 97 697 78 HOH HOH . R 7 HOH A 98 698 109 HOH HOH . R 7 HOH A 99 699 79 HOH HOH . R 7 HOH A 100 700 184 HOH HOH . R 7 HOH A 101 701 203 HOH HOH . R 7 HOH A 102 702 80 HOH HOH . R 7 HOH A 103 703 182 HOH HOH . R 7 HOH A 104 704 16 HOH HOH . R 7 HOH A 105 705 246 HOH HOH . R 7 HOH A 106 706 235 HOH HOH . R 7 HOH A 107 707 77 HOH HOH . R 7 HOH A 108 708 255 HOH HOH . R 7 HOH A 109 709 2 HOH HOH . R 7 HOH A 110 710 138 HOH HOH . R 7 HOH A 111 711 98 HOH HOH . R 7 HOH A 112 712 151 HOH HOH . R 7 HOH A 113 713 237 HOH HOH . R 7 HOH A 114 714 170 HOH HOH . R 7 HOH A 115 715 131 HOH HOH . R 7 HOH A 116 716 55 HOH HOH . R 7 HOH A 117 717 236 HOH HOH . R 7 HOH A 118 718 115 HOH HOH . R 7 HOH A 119 719 141 HOH HOH . R 7 HOH A 120 720 223 HOH HOH . R 7 HOH A 121 721 122 HOH HOH . S 7 HOH B 1 701 179 HOH HOH . S 7 HOH B 2 702 227 HOH HOH . S 7 HOH B 3 703 225 HOH HOH . S 7 HOH B 4 704 39 HOH HOH . S 7 HOH B 5 705 126 HOH HOH . S 7 HOH B 6 706 264 HOH HOH . S 7 HOH B 7 707 17 HOH HOH . S 7 HOH B 8 708 130 HOH HOH . S 7 HOH B 9 709 142 HOH HOH . S 7 HOH B 10 710 85 HOH HOH . S 7 HOH B 11 711 269 HOH HOH . S 7 HOH B 12 712 245 HOH HOH . S 7 HOH B 13 713 212 HOH HOH . S 7 HOH B 14 714 192 HOH HOH . S 7 HOH B 15 715 28 HOH HOH . S 7 HOH B 16 716 105 HOH HOH . S 7 HOH B 17 717 90 HOH HOH . S 7 HOH B 18 718 263 HOH HOH . S 7 HOH B 19 719 15 HOH HOH . S 7 HOH B 20 720 102 HOH HOH . S 7 HOH B 21 721 262 HOH HOH . S 7 HOH B 22 722 19 HOH HOH . S 7 HOH B 23 723 97 HOH HOH . S 7 HOH B 24 724 158 HOH HOH . S 7 HOH B 25 725 214 HOH HOH . S 7 HOH B 26 726 196 HOH HOH . S 7 HOH B 27 727 127 HOH HOH . S 7 HOH B 28 728 222 HOH HOH . S 7 HOH B 29 729 238 HOH HOH . S 7 HOH B 30 730 33 HOH HOH . S 7 HOH B 31 731 104 HOH HOH . S 7 HOH B 32 732 242 HOH HOH . S 7 HOH B 33 733 162 HOH HOH . S 7 HOH B 34 734 87 HOH HOH . S 7 HOH B 35 735 11 HOH HOH . S 7 HOH B 36 736 24 HOH HOH . S 7 HOH B 37 737 43 HOH HOH . S 7 HOH B 38 738 103 HOH HOH . S 7 HOH B 39 739 9 HOH HOH . S 7 HOH B 40 740 116 HOH HOH . S 7 HOH B 41 741 38 HOH HOH . S 7 HOH B 42 742 68 HOH HOH . S 7 HOH B 43 743 156 HOH HOH . S 7 HOH B 44 744 23 HOH HOH . S 7 HOH B 45 745 197 HOH HOH . S 7 HOH B 46 746 281 HOH HOH . S 7 HOH B 47 747 89 HOH HOH . S 7 HOH B 48 748 53 HOH HOH . S 7 HOH B 49 749 278 HOH HOH . S 7 HOH B 50 750 279 HOH HOH . S 7 HOH B 51 751 3 HOH HOH . S 7 HOH B 52 752 221 HOH HOH . S 7 HOH B 53 753 54 HOH HOH . S 7 HOH B 54 754 153 HOH HOH . S 7 HOH B 55 755 93 HOH HOH . S 7 HOH B 56 756 10 HOH HOH . S 7 HOH B 57 757 81 HOH HOH . S 7 HOH B 58 758 51 HOH HOH . S 7 HOH B 59 759 284 HOH HOH . S 7 HOH B 60 760 76 HOH HOH . S 7 HOH B 61 761 276 HOH HOH . S 7 HOH B 62 762 75 HOH HOH . S 7 HOH B 63 763 36 HOH HOH . S 7 HOH B 64 764 143 HOH HOH . S 7 HOH B 65 765 273 HOH HOH . S 7 HOH B 66 766 129 HOH HOH . S 7 HOH B 67 767 213 HOH HOH . S 7 HOH B 68 768 14 HOH HOH . S 7 HOH B 69 769 123 HOH HOH . S 7 HOH B 70 770 219 HOH HOH . S 7 HOH B 71 771 13 HOH HOH . S 7 HOH B 72 772 46 HOH HOH . S 7 HOH B 73 773 253 HOH HOH . S 7 HOH B 74 774 189 HOH HOH . S 7 HOH B 75 775 209 HOH HOH . S 7 HOH B 76 776 265 HOH HOH . S 7 HOH B 77 777 195 HOH HOH . S 7 HOH B 78 778 249 HOH HOH . S 7 HOH B 79 779 124 HOH HOH . S 7 HOH B 80 780 50 HOH HOH . S 7 HOH B 81 781 168 HOH HOH . S 7 HOH B 82 782 47 HOH HOH . S 7 HOH B 83 783 99 HOH HOH . S 7 HOH B 84 784 117 HOH HOH . S 7 HOH B 85 785 100 HOH HOH . S 7 HOH B 86 786 226 HOH HOH . S 7 HOH B 87 787 6 HOH HOH . S 7 HOH B 88 788 165 HOH HOH . S 7 HOH B 89 789 266 HOH HOH . S 7 HOH B 90 790 140 HOH HOH . S 7 HOH B 91 791 198 HOH HOH . S 7 HOH B 92 792 150 HOH HOH . S 7 HOH B 93 793 152 HOH HOH . S 7 HOH B 94 794 250 HOH HOH . S 7 HOH B 95 795 119 HOH HOH . S 7 HOH B 96 796 274 HOH HOH . S 7 HOH B 97 797 111 HOH HOH . S 7 HOH B 98 798 137 HOH HOH . S 7 HOH B 99 799 280 HOH HOH . S 7 HOH B 100 800 136 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 4 _atom_site.Cartn_x 22.623 _atom_site.Cartn_y -0.728 _atom_site.Cartn_z 37.415 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 22.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 604 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #