# Name: GDP # Created by ModelServer 0.9.12 # model_server_result.job_id: 8cZx_E0Ve7U02j9_X9-jwQ # model_server_result.datetime_utc: 2025-07-16 01:35:57 # model_server_result.server_version: 0.9.12 # model_server_result.query_name: ligand # model_server_result.source_id: pdb-bcif # model_server_result.entry_id: 6k9v # model_server_params.name: atom_site # model_server_params.value: {"label_asym_id":"J","auth_seq_id":501} # model_server_stats.io_time_ms: 123 # model_server_stats.parse_time_ms: 13 # model_server_stats.create_model_time_ms: 380 # model_server_stats.query_time_ms: 382 # model_server_stats.encode_time_ms: 1 # model_server_stats.element_count: 38 @MOLECULE GDP 38 40 1 **** **** @ATOM 1 PB 18.710 -49.493 -15.753 P.3 1 GDP 0.000 2 O1B 19.495 -50.161 -16.854 O.2 1 GDP 0.000 3 O2B 18.120 -50.523 -14.824 O.3 1 GDP 0.000 4 O3B 19.655 -48.604 -14.983 O.3 1 GDP 0.000 5 O3A 17.597 -48.551 -16.431 O.3 1 GDP 0.000 6 PA 16.105 -48.971 -16.873 P.3 1 GDP 0.000 7 O1A 16.059 -50.362 -17.456 O.2 1 GDP 0.000 8 O2A 15.104 -48.807 -15.756 O.3 1 GDP 0.000 9 O5' 15.892 -47.870 -18.023 O.3 1 GDP 0.000 10 C5' 14.798 -46.967 -18.054 C.3 1 GDP 0.000 11 C4' 14.365 -46.950 -19.507 C.3 1 GDP 0.000 12 O4' 14.080 -48.302 -19.866 O.3 1 GDP 0.000 13 C3' 13.112 -46.146 -19.755 C.3 1 GDP 0.000 14 O3' 13.252 -45.534 -21.038 O.3 1 GDP 0.000 15 C2' 12.001 -47.173 -19.700 C.3 1 GDP 0.000 16 O2' 10.929 -46.902 -20.606 O.3 1 GDP 0.000 17 C1' 12.681 -48.476 -20.066 C.3 1 GDP 0.000 18 N9 12.197 -49.573 -19.210 N.ar 1 GDP 0.000 19 C8 12.449 -49.744 -17.902 C.ar 1 GDP 0.000 20 N7 11.847 -50.873 -17.446 N.ar 1 GDP 0.000 21 C5 11.203 -51.433 -18.486 C.ar 1 GDP 0.000 22 C6 10.371 -52.630 -18.711 C.2 1 GDP 0.000 23 O6 10.108 -53.427 -17.795 O.2 1 GDP 0.000 24 N1 9.903 -52.839 -19.933 N.am 1 GDP 0.000 25 C2 10.152 -52.017 -20.962 C.cat 1 GDP 0.000 26 N2 9.622 -52.328 -22.168 N.pl3 1 GDP 0.000 27 N3 10.903 -50.898 -20.840 N.2 1 GDP 0.000 28 C4 11.441 -50.569 -19.645 C.ar 1 GDP 0.000 29 H4' 15.181 -46.553 -20.126 H 1 GDP 0.000 30 H3' 12.979 -45.397 -18.963 H 1 GDP 0.000 31 HO3' 12.460 -45.016 -21.236 H 1 GDP 0.000 32 H2' 11.623 -47.241 -18.670 H 1 GDP 0.000 33 HO2' 10.543 -46.040 -20.400 H 1 GDP 0.000 34 H1' 12.476 -48.702 -21.121 H 1 GDP 0.000 35 H8 13.046 -49.075 -17.295 H 1 GDP 0.000 36 HN1 9.315 -53.680 -20.101 H 1 GDP 0.000 37 HN21 9.058 -53.159 -22.272 H 1 GDP 0.000 38 HN22 9.790 -51.729 -22.964 H 1 GDP 0.000 @BOND 1 1 2 2 2 1 3 1 3 1 4 1 4 1 5 1 5 5 6 1 6 6 7 2 7 6 8 1 8 6 9 1 9 9 10 1 10 10 11 1 11 11 12 1 12 11 13 1 13 11 29 1 14 12 17 1 15 13 14 1 16 13 15 1 17 13 30 1 18 14 31 1 19 15 16 1 20 15 17 1 21 15 32 1 22 16 33 1 23 17 18 1 24 17 34 1 25 18 19 ar 26 18 28 ar 27 19 20 ar 28 19 35 1 29 20 21 ar 30 21 22 1 31 21 28 ar 32 22 23 2 33 22 24 1 34 24 25 1 35 24 36 1 36 25 26 1 37 25 27 2 38 26 37 1 39 26 38 1 40 27 28 1 @SUBSTRUCTURE 1 GDP 1