data_6K9X
#
_model_server_result.job_id            bPV4niC4yMHCbjxCT9mqtg 
_model_server_result.datetime_utc      '2024-11-19 17:53:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6k9x 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    6K9X 
#
_exptl.entry_id    6K9X 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              126.904 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'IODIDE ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6K9X 
_cell.length_a            48.597 
_cell.length_b            58.268 
_cell.length_c            70.239 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6K9X 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
? 3 E N N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.details
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.atom_stereo_config_1
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.atom_stereo_config_2
_pdbx_entity_branch_link.value_order
1 ? 2 2 1 XYP XYP C1 O1 . O4 HO4 . sing 
2 ? 2 3 2 XYP XYP C1 O1 . O4 HO4 . sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B XYP 1 B 1 XYP A 203 XYP 
2 n B XYP 2 B 2 XYP A 202 XYP 
2 n B XYP 3 B 3 XYP A 201 XYP 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B O4 XYP . B XYP 1 1_555 B C1 XYP . B XYP 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? 
covale ? covale2 B O4 XYP . B XYP 2 1_555 B C1 XYP . B XYP 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.361 ? 
#
_chem_comp.formula           'I -1' 
_chem_comp.formula_weight    126.904 
_chem_comp.id                IOD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'IODIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6K9X 
_atom_sites.fract_transf_matrix[1][1]    0.020577 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017162 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014237 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 IOD A 1 201 1 IOD IOD . 
D 3 IOD A 1 202 2 IOD IOD . 
E 3 IOD A 1 203 3 IOD IOD . 
F 4 HOH A 1 301 223 HOH HOH . 
F 4 HOH A 2 302 254 HOH HOH . 
F 4 HOH A 3 303 258 HOH HOH . 
F 4 HOH A 4 304 241 HOH HOH . 
F 4 HOH A 5 305 101 HOH HOH . 
F 4 HOH A 6 306 5 HOH HOH . 
F 4 HOH A 7 307 26 HOH HOH . 
F 4 HOH A 8 308 29 HOH HOH . 
F 4 HOH A 9 309 107 HOH HOH . 
F 4 HOH A 10 310 262 HOH HOH . 
F 4 HOH A 11 311 154 HOH HOH . 
F 4 HOH A 12 312 237 HOH HOH . 
F 4 HOH A 13 313 182 HOH HOH . 
F 4 HOH A 14 314 45 HOH HOH . 
F 4 HOH A 15 315 240 HOH HOH . 
F 4 HOH A 16 316 266 HOH HOH . 
F 4 HOH A 17 317 64 HOH HOH . 
F 4 HOH A 18 318 119 HOH HOH . 
F 4 HOH A 19 319 160 HOH HOH . 
F 4 HOH A 20 320 181 HOH HOH . 
F 4 HOH A 21 321 78 HOH HOH . 
F 4 HOH A 22 322 236 HOH HOH . 
F 4 HOH A 23 323 76 HOH HOH . 
F 4 HOH A 24 324 46 HOH HOH . 
F 4 HOH A 25 325 43 HOH HOH . 
F 4 HOH A 26 326 148 HOH HOH . 
F 4 HOH A 27 327 121 HOH HOH . 
F 4 HOH A 28 328 116 HOH HOH . 
F 4 HOH A 29 329 65 HOH HOH . 
F 4 HOH A 30 330 38 HOH HOH . 
F 4 HOH A 31 331 71 HOH HOH . 
F 4 HOH A 32 332 3 HOH HOH . 
F 4 HOH A 33 333 61 HOH HOH . 
F 4 HOH A 34 334 227 HOH HOH . 
F 4 HOH A 35 335 74 HOH HOH . 
F 4 HOH A 36 336 8 HOH HOH . 
F 4 HOH A 37 337 91 HOH HOH . 
F 4 HOH A 38 338 151 HOH HOH . 
F 4 HOH A 39 339 20 HOH HOH . 
F 4 HOH A 40 340 207 HOH HOH . 
F 4 HOH A 41 341 112 HOH HOH . 
F 4 HOH A 42 342 22 HOH HOH . 
F 4 HOH A 43 343 1 HOH HOH . 
F 4 HOH A 44 344 52 HOH HOH . 
F 4 HOH A 45 345 27 HOH HOH . 
F 4 HOH A 46 346 136 HOH HOH . 
F 4 HOH A 47 347 13 HOH HOH . 
F 4 HOH A 48 348 135 HOH HOH . 
F 4 HOH A 49 349 53 HOH HOH . 
F 4 HOH A 50 350 171 HOH HOH . 
F 4 HOH A 51 351 19 HOH HOH . 
F 4 HOH A 52 352 35 HOH HOH . 
F 4 HOH A 53 353 250 HOH HOH . 
F 4 HOH A 54 354 169 HOH HOH . 
F 4 HOH A 55 355 12 HOH HOH . 
F 4 HOH A 56 356 113 HOH HOH . 
F 4 HOH A 57 357 77 HOH HOH . 
F 4 HOH A 58 358 82 HOH HOH . 
F 4 HOH A 59 359 40 HOH HOH . 
F 4 HOH A 60 360 102 HOH HOH . 
F 4 HOH A 61 361 232 HOH HOH . 
F 4 HOH A 62 362 128 HOH HOH . 
F 4 HOH A 63 363 42 HOH HOH . 
F 4 HOH A 64 364 97 HOH HOH . 
F 4 HOH A 65 365 265 HOH HOH . 
F 4 HOH A 66 366 263 HOH HOH . 
F 4 HOH A 67 367 14 HOH HOH . 
F 4 HOH A 68 368 92 HOH HOH . 
F 4 HOH A 69 369 48 HOH HOH . 
F 4 HOH A 70 370 115 HOH HOH . 
F 4 HOH A 71 371 140 HOH HOH . 
F 4 HOH A 72 372 30 HOH HOH . 
F 4 HOH A 73 373 127 HOH HOH . 
F 4 HOH A 74 374 96 HOH HOH . 
F 4 HOH A 75 375 32 HOH HOH . 
F 4 HOH A 76 376 81 HOH HOH . 
F 4 HOH A 77 377 143 HOH HOH . 
F 4 HOH A 78 378 28 HOH HOH . 
F 4 HOH A 79 379 79 HOH HOH . 
F 4 HOH A 80 380 85 HOH HOH . 
F 4 HOH A 81 381 60 HOH HOH . 
F 4 HOH A 82 382 58 HOH HOH . 
F 4 HOH A 83 383 98 HOH HOH . 
F 4 HOH A 84 384 229 HOH HOH . 
F 4 HOH A 85 385 54 HOH HOH . 
F 4 HOH A 86 386 25 HOH HOH . 
F 4 HOH A 87 387 100 HOH HOH . 
F 4 HOH A 88 388 50 HOH HOH . 
F 4 HOH A 89 389 172 HOH HOH . 
F 4 HOH A 90 390 31 HOH HOH . 
F 4 HOH A 91 391 10 HOH HOH . 
F 4 HOH A 92 392 174 HOH HOH . 
F 4 HOH A 93 393 219 HOH HOH . 
F 4 HOH A 94 394 15 HOH HOH . 
F 4 HOH A 95 395 228 HOH HOH . 
F 4 HOH A 96 396 120 HOH HOH . 
F 4 HOH A 97 397 122 HOH HOH . 
F 4 HOH A 98 398 187 HOH HOH . 
F 4 HOH A 99 399 249 HOH HOH . 
F 4 HOH A 100 400 39 HOH HOH . 
F 4 HOH A 101 401 95 HOH HOH . 
F 4 HOH A 102 402 59 HOH HOH . 
F 4 HOH A 103 403 75 HOH HOH . 
F 4 HOH A 104 404 49 HOH HOH . 
F 4 HOH A 105 405 199 HOH HOH . 
F 4 HOH A 106 406 68 HOH HOH . 
F 4 HOH A 107 407 108 HOH HOH . 
F 4 HOH A 108 408 47 HOH HOH . 
F 4 HOH A 109 409 33 HOH HOH . 
F 4 HOH A 110 410 109 HOH HOH . 
F 4 HOH A 111 411 191 HOH HOH . 
F 4 HOH A 112 412 18 HOH HOH . 
F 4 HOH A 113 413 185 HOH HOH . 
F 4 HOH A 114 414 41 HOH HOH . 
F 4 HOH A 115 415 56 HOH HOH . 
F 4 HOH A 116 416 253 HOH HOH . 
F 4 HOH A 117 417 125 HOH HOH . 
F 4 HOH A 118 418 197 HOH HOH . 
F 4 HOH A 119 419 238 HOH HOH . 
F 4 HOH A 120 420 69 HOH HOH . 
F 4 HOH A 121 421 55 HOH HOH . 
F 4 HOH A 122 422 126 HOH HOH . 
F 4 HOH A 123 423 150 HOH HOH . 
F 4 HOH A 124 424 246 HOH HOH . 
F 4 HOH A 125 425 178 HOH HOH . 
F 4 HOH A 126 426 137 HOH HOH . 
F 4 HOH A 127 427 23 HOH HOH . 
F 4 HOH A 128 428 170 HOH HOH . 
F 4 HOH A 129 429 111 HOH HOH . 
F 4 HOH A 130 430 264 HOH HOH . 
F 4 HOH A 131 431 67 HOH HOH . 
F 4 HOH A 132 432 66 HOH HOH . 
F 4 HOH A 133 433 83 HOH HOH . 
F 4 HOH A 134 434 86 HOH HOH . 
F 4 HOH A 135 435 118 HOH HOH . 
F 4 HOH A 136 436 190 HOH HOH . 
F 4 HOH A 137 437 70 HOH HOH . 
F 4 HOH A 138 438 130 HOH HOH . 
F 4 HOH A 139 439 72 HOH HOH . 
F 4 HOH A 140 440 24 HOH HOH . 
F 4 HOH A 141 441 90 HOH HOH . 
F 4 HOH A 142 442 177 HOH HOH . 
F 4 HOH A 143 443 147 HOH HOH . 
F 4 HOH A 144 444 212 HOH HOH . 
F 4 HOH A 145 445 87 HOH HOH . 
F 4 HOH A 146 446 234 HOH HOH . 
F 4 HOH A 147 447 146 HOH HOH . 
F 4 HOH A 148 448 189 HOH HOH . 
F 4 HOH A 149 449 226 HOH HOH . 
F 4 HOH A 150 450 62 HOH HOH . 
F 4 HOH A 151 451 89 HOH HOH . 
F 4 HOH A 152 452 129 HOH HOH . 
F 4 HOH A 153 453 142 HOH HOH . 
F 4 HOH A 154 454 88 HOH HOH . 
F 4 HOH A 155 455 225 HOH HOH . 
F 4 HOH A 156 456 134 HOH HOH . 
F 4 HOH A 157 457 208 HOH HOH . 
F 4 HOH A 158 458 73 HOH HOH . 
F 4 HOH A 159 459 180 HOH HOH . 
F 4 HOH A 160 460 235 HOH HOH . 
F 4 HOH A 161 461 36 HOH HOH . 
F 4 HOH A 162 462 163 HOH HOH . 
F 4 HOH A 163 463 179 HOH HOH . 
F 4 HOH A 164 464 200 HOH HOH . 
F 4 HOH A 165 465 105 HOH HOH . 
F 4 HOH A 166 466 141 HOH HOH . 
F 4 HOH A 167 467 51 HOH HOH . 
F 4 HOH A 168 468 133 HOH HOH . 
F 4 HOH A 169 469 44 HOH HOH . 
F 4 HOH A 170 470 104 HOH HOH . 
F 4 HOH A 171 471 220 HOH HOH . 
F 4 HOH A 172 472 34 HOH HOH . 
F 4 HOH A 173 473 188 HOH HOH . 
F 4 HOH A 174 474 57 HOH HOH . 
F 4 HOH A 175 475 164 HOH HOH . 
F 4 HOH A 176 476 224 HOH HOH . 
F 4 HOH A 177 477 261 HOH HOH . 
F 4 HOH A 178 478 248 HOH HOH . 
F 4 HOH A 179 479 244 HOH HOH . 
F 4 HOH A 180 480 239 HOH HOH . 
F 4 HOH A 181 481 132 HOH HOH . 
F 4 HOH A 182 482 217 HOH HOH . 
F 4 HOH A 183 483 230 HOH HOH . 
F 4 HOH A 184 484 183 HOH HOH . 
F 4 HOH A 185 485 252 HOH HOH . 
F 4 HOH A 186 486 99 HOH HOH . 
F 4 HOH A 187 487 144 HOH HOH . 
F 4 HOH A 188 488 260 HOH HOH . 
F 4 HOH A 189 489 194 HOH HOH . 
F 4 HOH A 190 490 221 HOH HOH . 
F 4 HOH A 191 491 145 HOH HOH . 
F 4 HOH A 192 492 138 HOH HOH . 
F 4 HOH A 193 493 218 HOH HOH . 
F 4 HOH A 194 494 247 HOH HOH . 
F 4 HOH A 195 495 80 HOH HOH . 
F 4 HOH A 196 496 152 HOH HOH . 
F 4 HOH A 197 497 243 HOH HOH . 
F 4 HOH A 198 498 94 HOH HOH . 
F 4 HOH A 199 499 192 HOH HOH . 
F 4 HOH A 200 500 175 HOH HOH . 
F 4 HOH A 201 501 114 HOH HOH . 
F 4 HOH A 202 502 103 HOH HOH . 
F 4 HOH A 203 503 257 HOH HOH . 
F 4 HOH A 204 504 259 HOH HOH . 
F 4 HOH A 205 505 106 HOH HOH . 
F 4 HOH A 206 506 216 HOH HOH . 
F 4 HOH A 207 507 153 HOH HOH . 
F 4 HOH A 208 508 110 HOH HOH . 
F 4 HOH A 209 509 242 HOH HOH . 
F 4 HOH A 210 510 233 HOH HOH . 
F 4 HOH A 211 511 167 HOH HOH . 
F 4 HOH A 212 512 156 HOH HOH . 
F 4 HOH A 213 513 209 HOH HOH . 
F 4 HOH A 214 514 168 HOH HOH . 
F 4 HOH A 215 515 210 HOH HOH . 
F 4 HOH A 216 516 193 HOH HOH . 
F 4 HOH A 217 517 93 HOH HOH . 
F 4 HOH A 218 518 251 HOH HOH . 
F 4 HOH A 219 519 63 HOH HOH . 
F 4 HOH A 220 520 256 HOH HOH . 
F 4 HOH A 221 521 162 HOH HOH . 
F 4 HOH A 222 522 255 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           I 
_atom_site.label_atom_id         I 
_atom_site.label_comp_id         IOD 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               16.238 
_atom_site.Cartn_y               39.765 
_atom_site.Cartn_z               -29.384 
_atom_site.occupancy             0.48 
_atom_site.B_iso_or_equiv        16.48 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          I 
_atom_site.auth_comp_id          IOD 
_atom_site.auth_seq_id           202 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           1 
#