data_6KBA
#
_model_server_result.job_id            G07kE3U6tQVjvv7TBJsTQA 
_model_server_result.datetime_utc      '2024-11-24 03:07:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6kba 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
#
_entry.id    6KBA 
#
_exptl.entry_id    6KBA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              323.798 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '2-({4-CHLORO-6-[(2,3-DIMETHYLPHENYL)AMINO]PYRIMIDIN-2-YL}SULFANYL)ACETIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          105.94 
_cell.angle_gamma         90 
_cell.entry_id            6KBA 
_cell.length_a            44.949 
_cell.length_b            62.549 
_cell.length_c            53.572 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KBA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    'P 2yb' 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C14 H14 Cl N3 O2 S' 
_chem_comp.formula_weight    323.798 
_chem_comp.id                WY1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '2-({4-CHLORO-6-[(2,3-DIMETHYLPHENYL)AMINO]PYRIMIDIN-2-YL}SULFANYL)ACETIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAB CAR WY1 sing 348 n n 
CAR CAP WY1 sing 349 n y 
CAR CAT WY1 doub 350 n y 
CAP CAA WY1 sing 351 n n 
CAP CAG WY1 doub 352 n y 
CAG CAF WY1 sing 353 n y 
CAF CAH WY1 doub 354 n y 
CAH CAT WY1 sing 355 n y 
CAT NAM WY1 sing 356 n n 
NAM C4 WY1 sing 357 n n 
C4 N3 WY1 doub 358 n y 
C4 C5 WY1 sing 359 n y 
N3 C2 WY1 sing 360 n y 
C5 C6 WY1 doub 361 n y 
C6 CL6 WY1 sing 362 n n 
C6 N1 WY1 sing 363 n y 
N1 C2 WY1 doub 364 n y 
C2 SAN WY1 sing 365 n n 
SAN CAJ WY1 sing 366 n n 
CAJ CAO WY1 sing 367 n n 
CAO OAC WY1 doub 368 n n 
CAO OAD WY1 sing 369 n n 
CAB HAB1 WY1 sing 370 n n 
CAB HAB2 WY1 sing 371 n n 
CAB HAB3 WY1 sing 372 n n 
CAA HAA1 WY1 sing 373 n n 
CAA HAA2 WY1 sing 374 n n 
CAA HAA3 WY1 sing 375 n n 
CAG HAG WY1 sing 376 n n 
CAF HAF WY1 sing 377 n n 
CAH HAH WY1 sing 378 n n 
NAM HAM WY1 sing 379 n n 
C5 H5 WY1 sing 380 n n 
CAJ HAJ1 WY1 sing 381 n n 
CAJ HAJ2 WY1 sing 382 n n 
OAD HAD WY1 sing 383 n n 
#
_atom_sites.entry_id                     6KBA 
_atom_sites.fract_transf_matrix[1][1]    0.022247 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.006354 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015987 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019413 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 WY1 A 1 501 1 WY1 WY1 . 
C 2 WY1 A 1 502 2 WY1 WY1 . 
D 3 HOH A 1 601 34 HOH HOH . 
D 3 HOH A 2 602 12 HOH HOH . 
D 3 HOH A 3 603 52 HOH HOH . 
D 3 HOH A 4 604 53 HOH HOH . 
D 3 HOH A 5 605 29 HOH HOH . 
D 3 HOH A 6 606 45 HOH HOH . 
D 3 HOH A 7 607 15 HOH HOH . 
D 3 HOH A 8 608 17 HOH HOH . 
D 3 HOH A 9 609 21 HOH HOH . 
D 3 HOH A 10 610 70 HOH HOH . 
D 3 HOH A 11 611 48 HOH HOH . 
D 3 HOH A 12 612 8 HOH HOH . 
D 3 HOH A 13 613 57 HOH HOH . 
D 3 HOH A 14 614 1 HOH HOH . 
D 3 HOH A 15 615 50 HOH HOH . 
D 3 HOH A 16 616 56 HOH HOH . 
D 3 HOH A 17 617 23 HOH HOH . 
D 3 HOH A 18 618 67 HOH HOH . 
D 3 HOH A 19 619 5 HOH HOH . 
D 3 HOH A 20 620 7 HOH HOH . 
D 3 HOH A 21 621 39 HOH HOH . 
D 3 HOH A 22 622 64 HOH HOH . 
D 3 HOH A 23 623 25 HOH HOH . 
D 3 HOH A 24 624 10 HOH HOH . 
D 3 HOH A 25 625 18 HOH HOH . 
D 3 HOH A 26 626 68 HOH HOH . 
D 3 HOH A 27 627 55 HOH HOH . 
D 3 HOH A 28 628 3 HOH HOH . 
D 3 HOH A 29 629 30 HOH HOH . 
D 3 HOH A 30 630 32 HOH HOH . 
D 3 HOH A 31 631 26 HOH HOH . 
D 3 HOH A 32 632 40 HOH HOH . 
D 3 HOH A 33 633 51 HOH HOH . 
D 3 HOH A 34 634 4 HOH HOH . 
D 3 HOH A 35 635 41 HOH HOH . 
D 3 HOH A 36 636 33 HOH HOH . 
D 3 HOH A 37 637 59 HOH HOH . 
D 3 HOH A 38 638 24 HOH HOH . 
D 3 HOH A 39 639 47 HOH HOH . 
D 3 HOH A 40 640 19 HOH HOH . 
D 3 HOH A 41 641 13 HOH HOH . 
D 3 HOH A 42 642 27 HOH HOH . 
D 3 HOH A 43 643 31 HOH HOH . 
D 3 HOH A 44 644 66 HOH HOH . 
D 3 HOH A 45 645 46 HOH HOH . 
D 3 HOH A 46 646 60 HOH HOH . 
D 3 HOH A 47 647 58 HOH HOH . 
D 3 HOH A 48 648 36 HOH HOH . 
D 3 HOH A 49 649 9 HOH HOH . 
D 3 HOH A 50 650 6 HOH HOH . 
D 3 HOH A 51 651 63 HOH HOH . 
D 3 HOH A 52 652 42 HOH HOH . 
D 3 HOH A 53 653 43 HOH HOH . 
D 3 HOH A 54 654 28 HOH HOH . 
D 3 HOH A 55 655 2 HOH HOH . 
D 3 HOH A 56 656 22 HOH HOH . 
D 3 HOH A 57 657 62 HOH HOH . 
D 3 HOH A 58 658 11 HOH HOH . 
D 3 HOH A 59 659 54 HOH HOH . 
D 3 HOH A 60 660 16 HOH HOH . 
D 3 HOH A 61 661 20 HOH HOH . 
D 3 HOH A 62 662 65 HOH HOH . 
D 3 HOH A 63 663 49 HOH HOH . 
D 3 HOH A 64 664 61 HOH HOH . 
D 3 HOH A 65 665 44 HOH HOH . 
D 3 HOH A 66 666 69 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAB WY1 . . . B 2 13.858 6.841 -13.196 1 38.36 ? CAB WY1 501 A 1 
HETATM 2 C CAR WY1 . . . B 2 13.031 8.114 -12.997 1 35.25 ? CAR WY1 501 A 1 
HETATM 3 C CAP WY1 . . . B 2 11.64 8.092 -13.005 1 37.45 ? CAP WY1 501 A 1 
HETATM 4 C CAA WY1 . . . B 2 10.876 6.788 -13.215 1 39.16 ? CAA WY1 501 A 1 
HETATM 5 C CAG WY1 . . . B 2 10.926 9.266 -12.815 1 47.21 ? CAG WY1 501 A 1 
HETATM 6 C CAF WY1 . . . B 2 11.593 10.463 -12.623 1 41.84 ? CAF WY1 501 A 1 
HETATM 7 C CAH WY1 . . . B 2 12.979 10.488 -12.614 1 40.45 ? CAH WY1 501 A 1 
HETATM 8 C CAT WY1 . . . B 2 13.691 9.312 -12.798 1 39.89 ? CAT WY1 501 A 1 
HETATM 9 N NAM WY1 . . . B 2 15.14 9.318 -12.803 1 34.36 ? NAM WY1 501 A 1 
HETATM 10 C C4 WY1 . . . B 2 15.924 9.586 -11.617 1 40.79 ? C4 WY1 501 A 1 
HETATM 11 N N3 WY1 . . . B 2 17.233 9.557 -11.74 1 45.51 ? N3 WY1 501 A 1 
HETATM 12 C C5 WY1 . . . B 2 15.358 9.86 -10.412 1 42.27 ? C5 WY1 501 A 1 
HETATM 13 C C6 WY1 . . . B 2 16.161 10.104 -9.346 1 42.7 ? C6 WY1 501 A 1 
HETATM 14 CL CL6 WY1 . . . B 2 15.44 10.468 -7.758 1 87.58 ? CL6 WY1 501 A 1 
HETATM 15 N N1 WY1 . . . B 2 17.479 10.073 -9.473 1 43.88 ? N1 WY1 501 A 1 
HETATM 16 C C2 WY1 . . . B 2 18.022 9.796 -10.677 1 49.08 ? C2 WY1 501 A 1 
HETATM 17 S SAN WY1 . . . B 2 19.82 9.736 -10.902 1 55.44 ? SAN WY1 501 A 1 
HETATM 18 C CAJ WY1 . . . B 2 20.646 10.155 -9.34 1 53.83 ? CAJ WY1 501 A 1 
HETATM 19 C CAO WY1 . . . B 2 22.158 10.01 -9.523 1 59.44 ? CAO WY1 501 A 1 
HETATM 20 O OAC WY1 . . . B 2 22.623 9.612 -10.626 1 51.35 ? OAC WY1 501 A 1 
HETATM 21 O OAD WY1 . . . B 2 22.934 10.287 -8.569 1 61.43 -1 OAD WY1 501 A 1 
HETATM 22 H HAB1 WY1 . . . B 2 13.35 6.074 -12.891 1 46.03 ? HAB1 WY1 501 A 1 
HETATM 23 H HAB2 WY1 . . . B 2 14.681 6.907 -12.687 1 46.03 ? HAB2 WY1 501 A 1 
HETATM 24 H HAB3 WY1 . . . B 2 14.069 6.736 -14.138 1 46.03 ? HAB3 WY1 501 A 1 
HETATM 25 H HAA1 WY1 . . . B 2 11.195 6.354 -14.022 1 47 ? HAA1 WY1 501 A 1 
HETATM 26 H HAA2 WY1 . . . B 2 9.929 6.979 -13.303 1 47 ? HAA2 WY1 501 A 1 
HETATM 27 H HAA3 WY1 . . . B 2 11.02 6.204 -12.455 1 47 ? HAA3 WY1 501 A 1 
HETATM 28 H HAG WY1 . . . B 2 9.996 9.249 -12.821 1 56.66 ? HAG WY1 501 A 1 
HETATM 29 H HAF WY1 . . . B 2 11.112 11.249 -12.497 1 50.21 ? HAF WY1 501 A 1 
HETATM 30 H HAH WY1 . . . B 2 13.43 11.291 -12.486 1 48.54 ? HAH WY1 501 A 1 
HETATM 31 H HAM WY1 . . . B 2 15.551 9.157 -13.541 1 41.24 ? HAM WY1 501 A 1 
HETATM 32 H H5 WY1 . . . B 2 14.433 9.886 -10.32 1 50.73 ? H5 WY1 501 A 1 
HETATM 33 H HAJ1 WY1 . . . B 2 20.434 11.069 -9.096 1 64.6 ? HAJ1 WY1 501 A 1 
HETATM 34 H HAJ2 WY1 . . . B 2 20.344 9.554 -8.641 1 64.6 ? HAJ2 WY1 501 A 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           34 
#