data_6KDC # _model_server_result.job_id id8S_c8kQd1WD_NAyWKqfw _model_server_result.datetime_utc '2024-10-20 20:47:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6kdc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":506}' # _entry.id 6KDC # _exptl.entry_id 6KDC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KDC _cell.length_a 63.04 _cell.length_b 101.397 _cell.length_c 170.542 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KDC _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6KDC _atom_sites.fract_transf_matrix[1][1] 0.015863 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009862 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005864 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 501 501 GOL GOL . C 2 GOL A 1 502 502 GOL GOL . D 2 GOL A 1 503 503 GOL GOL . E 2 GOL A 1 504 504 GOL GOL . F 2 GOL A 1 505 505 GOL GOL . G 3 CO A 1 506 506 CO CO . H 3 CO A 1 507 507 CO CO . I 4 HOH A 1 601 602 HOH HOH . I 4 HOH A 2 602 603 HOH HOH . I 4 HOH A 3 603 604 HOH HOH . I 4 HOH A 4 604 605 HOH HOH . I 4 HOH A 5 605 606 HOH HOH . I 4 HOH A 6 606 607 HOH HOH . I 4 HOH A 7 607 608 HOH HOH . I 4 HOH A 8 608 609 HOH HOH . I 4 HOH A 9 609 610 HOH HOH . I 4 HOH A 10 610 611 HOH HOH . I 4 HOH A 11 611 612 HOH HOH . I 4 HOH A 12 612 613 HOH HOH . I 4 HOH A 13 613 614 HOH HOH . I 4 HOH A 14 614 615 HOH HOH . I 4 HOH A 15 615 616 HOH HOH . I 4 HOH A 16 616 617 HOH HOH . I 4 HOH A 17 617 618 HOH HOH . I 4 HOH A 18 618 619 HOH HOH . I 4 HOH A 19 619 620 HOH HOH . I 4 HOH A 20 620 621 HOH HOH . I 4 HOH A 21 621 622 HOH HOH . I 4 HOH A 22 622 623 HOH HOH . I 4 HOH A 23 623 624 HOH HOH . I 4 HOH A 24 624 625 HOH HOH . I 4 HOH A 25 625 626 HOH HOH . I 4 HOH A 26 626 627 HOH HOH . I 4 HOH A 27 627 628 HOH HOH . I 4 HOH A 28 628 629 HOH HOH . I 4 HOH A 29 629 630 HOH HOH . I 4 HOH A 30 630 631 HOH HOH . I 4 HOH A 31 631 632 HOH HOH . I 4 HOH A 32 632 633 HOH HOH . I 4 HOH A 33 633 634 HOH HOH . I 4 HOH A 34 634 685 HOH HOH . I 4 HOH A 35 635 635 HOH HOH . I 4 HOH A 36 636 636 HOH HOH . I 4 HOH A 37 637 637 HOH HOH . I 4 HOH A 38 638 638 HOH HOH . I 4 HOH A 39 639 639 HOH HOH . I 4 HOH A 40 640 640 HOH HOH . I 4 HOH A 41 641 641 HOH HOH . I 4 HOH A 42 642 643 HOH HOH . I 4 HOH A 43 643 644 HOH HOH . I 4 HOH A 44 644 645 HOH HOH . I 4 HOH A 45 645 646 HOH HOH . I 4 HOH A 46 646 647 HOH HOH . I 4 HOH A 47 647 648 HOH HOH . I 4 HOH A 48 648 649 HOH HOH . I 4 HOH A 49 649 650 HOH HOH . I 4 HOH A 50 650 651 HOH HOH . I 4 HOH A 51 651 652 HOH HOH . I 4 HOH A 52 652 653 HOH HOH . I 4 HOH A 53 653 654 HOH HOH . I 4 HOH A 54 654 655 HOH HOH . I 4 HOH A 55 655 656 HOH HOH . I 4 HOH A 56 656 657 HOH HOH . I 4 HOH A 57 657 658 HOH HOH . I 4 HOH A 58 658 659 HOH HOH . I 4 HOH A 59 659 660 HOH HOH . I 4 HOH A 60 660 661 HOH HOH . I 4 HOH A 61 661 662 HOH HOH . I 4 HOH A 62 662 663 HOH HOH . I 4 HOH A 63 663 664 HOH HOH . I 4 HOH A 64 664 665 HOH HOH . I 4 HOH A 65 665 666 HOH HOH . I 4 HOH A 66 666 667 HOH HOH . I 4 HOH A 67 667 668 HOH HOH . I 4 HOH A 68 668 669 HOH HOH . I 4 HOH A 69 669 670 HOH HOH . I 4 HOH A 70 670 671 HOH HOH . I 4 HOH A 71 671 672 HOH HOH . I 4 HOH A 72 672 673 HOH HOH . I 4 HOH A 73 673 674 HOH HOH . I 4 HOH A 74 674 675 HOH HOH . I 4 HOH A 75 675 676 HOH HOH . I 4 HOH A 76 676 677 HOH HOH . I 4 HOH A 77 677 678 HOH HOH . I 4 HOH A 78 678 679 HOH HOH . I 4 HOH A 79 679 680 HOH HOH . I 4 HOH A 80 680 681 HOH HOH . I 4 HOH A 81 681 682 HOH HOH . I 4 HOH A 82 682 683 HOH HOH . I 4 HOH A 83 683 684 HOH HOH . I 4 HOH A 84 684 686 HOH HOH . I 4 HOH A 85 685 687 HOH HOH . I 4 HOH A 86 686 688 HOH HOH . I 4 HOH A 87 687 689 HOH HOH . I 4 HOH A 88 688 690 HOH HOH . I 4 HOH A 89 689 692 HOH HOH . I 4 HOH A 90 690 693 HOH HOH . I 4 HOH A 91 691 694 HOH HOH . I 4 HOH A 92 692 695 HOH HOH . I 4 HOH A 93 693 696 HOH HOH . I 4 HOH A 94 694 697 HOH HOH . I 4 HOH A 95 695 698 HOH HOH . I 4 HOH A 96 696 699 HOH HOH . I 4 HOH A 97 697 700 HOH HOH . I 4 HOH A 98 698 701 HOH HOH . I 4 HOH A 99 699 702 HOH HOH . I 4 HOH A 100 700 703 HOH HOH . I 4 HOH A 101 701 704 HOH HOH . I 4 HOH A 102 702 705 HOH HOH . I 4 HOH A 103 703 706 HOH HOH . I 4 HOH A 104 704 707 HOH HOH . I 4 HOH A 105 705 708 HOH HOH . I 4 HOH A 106 706 709 HOH HOH . I 4 HOH A 107 707 710 HOH HOH . I 4 HOH A 108 708 711 HOH HOH . I 4 HOH A 109 709 712 HOH HOH . I 4 HOH A 110 710 713 HOH HOH . I 4 HOH A 111 711 714 HOH HOH . I 4 HOH A 112 712 715 HOH HOH . I 4 HOH A 113 713 716 HOH HOH . I 4 HOH A 114 714 717 HOH HOH . I 4 HOH A 115 715 718 HOH HOH . I 4 HOH A 116 716 719 HOH HOH . I 4 HOH A 117 717 691 HOH HOH . I 4 HOH A 118 718 720 HOH HOH . I 4 HOH A 119 719 721 HOH HOH . I 4 HOH A 120 720 722 HOH HOH . I 4 HOH A 121 721 723 HOH HOH . I 4 HOH A 122 722 724 HOH HOH . I 4 HOH A 123 723 725 HOH HOH . I 4 HOH A 124 724 726 HOH HOH . I 4 HOH A 125 725 727 HOH HOH . I 4 HOH A 126 726 728 HOH HOH . I 4 HOH A 127 727 729 HOH HOH . I 4 HOH A 128 728 730 HOH HOH . I 4 HOH A 129 729 731 HOH HOH . I 4 HOH A 130 730 732 HOH HOH . I 4 HOH A 131 731 733 HOH HOH . I 4 HOH A 132 732 734 HOH HOH . I 4 HOH A 133 733 735 HOH HOH . I 4 HOH A 134 734 736 HOH HOH . I 4 HOH A 135 735 737 HOH HOH . I 4 HOH A 136 736 738 HOH HOH . I 4 HOH A 137 737 739 HOH HOH . I 4 HOH A 138 738 740 HOH HOH . I 4 HOH A 139 739 741 HOH HOH . I 4 HOH A 140 740 742 HOH HOH . I 4 HOH A 141 741 743 HOH HOH . I 4 HOH A 142 742 744 HOH HOH . I 4 HOH A 143 743 745 HOH HOH . I 4 HOH A 144 744 746 HOH HOH . I 4 HOH A 145 745 747 HOH HOH . I 4 HOH A 146 746 748 HOH HOH . I 4 HOH A 147 747 749 HOH HOH . I 4 HOH A 148 748 750 HOH HOH . I 4 HOH A 149 749 751 HOH HOH . I 4 HOH A 150 750 752 HOH HOH . I 4 HOH A 151 751 753 HOH HOH . I 4 HOH A 152 752 754 HOH HOH . I 4 HOH A 153 753 755 HOH HOH . I 4 HOH A 154 754 756 HOH HOH . I 4 HOH A 155 755 757 HOH HOH . I 4 HOH A 156 756 758 HOH HOH . I 4 HOH A 157 757 759 HOH HOH . I 4 HOH A 158 758 760 HOH HOH . I 4 HOH A 159 759 761 HOH HOH . I 4 HOH A 160 760 762 HOH HOH . I 4 HOH A 161 761 763 HOH HOH . I 4 HOH A 162 762 764 HOH HOH . I 4 HOH A 163 763 765 HOH HOH . I 4 HOH A 164 764 766 HOH HOH . I 4 HOH A 165 765 767 HOH HOH . I 4 HOH A 166 766 768 HOH HOH . I 4 HOH A 167 767 769 HOH HOH . I 4 HOH A 168 768 770 HOH HOH . I 4 HOH A 169 769 771 HOH HOH . I 4 HOH A 170 770 772 HOH HOH . I 4 HOH A 171 771 773 HOH HOH . I 4 HOH A 172 772 774 HOH HOH . I 4 HOH A 173 773 775 HOH HOH . I 4 HOH A 174 774 776 HOH HOH . I 4 HOH A 175 775 777 HOH HOH . I 4 HOH A 176 776 778 HOH HOH . I 4 HOH A 177 777 779 HOH HOH . I 4 HOH A 178 778 780 HOH HOH . I 4 HOH A 179 779 781 HOH HOH . I 4 HOH A 180 780 782 HOH HOH . I 4 HOH A 181 781 783 HOH HOH . I 4 HOH A 182 782 784 HOH HOH . I 4 HOH A 183 783 785 HOH HOH . I 4 HOH A 184 784 786 HOH HOH . I 4 HOH A 185 785 787 HOH HOH . I 4 HOH A 186 786 788 HOH HOH . I 4 HOH A 187 787 789 HOH HOH . I 4 HOH A 188 788 790 HOH HOH . I 4 HOH A 189 789 791 HOH HOH . I 4 HOH A 190 790 792 HOH HOH . I 4 HOH A 191 791 793 HOH HOH . I 4 HOH A 192 792 794 HOH HOH . I 4 HOH A 193 793 795 HOH HOH . I 4 HOH A 194 794 796 HOH HOH . I 4 HOH A 195 795 797 HOH HOH . I 4 HOH A 196 796 798 HOH HOH . I 4 HOH A 197 797 799 HOH HOH . I 4 HOH A 198 798 800 HOH HOH . I 4 HOH A 199 799 801 HOH HOH . I 4 HOH A 200 800 802 HOH HOH . I 4 HOH A 201 801 803 HOH HOH . I 4 HOH A 202 802 804 HOH HOH . I 4 HOH A 203 803 805 HOH HOH . I 4 HOH A 204 804 806 HOH HOH . I 4 HOH A 205 805 807 HOH HOH . I 4 HOH A 206 806 808 HOH HOH . I 4 HOH A 207 807 809 HOH HOH . I 4 HOH A 208 808 810 HOH HOH . I 4 HOH A 209 809 811 HOH HOH . I 4 HOH A 210 810 812 HOH HOH . I 4 HOH A 211 811 813 HOH HOH . I 4 HOH A 212 812 814 HOH HOH . I 4 HOH A 213 813 815 HOH HOH . I 4 HOH A 214 814 816 HOH HOH . I 4 HOH A 215 815 817 HOH HOH . I 4 HOH A 216 816 818 HOH HOH . I 4 HOH A 217 817 819 HOH HOH . I 4 HOH A 218 818 820 HOH HOH . I 4 HOH A 219 819 821 HOH HOH . I 4 HOH A 220 820 822 HOH HOH . I 4 HOH A 221 821 823 HOH HOH . I 4 HOH A 222 822 824 HOH HOH . I 4 HOH A 223 823 825 HOH HOH . I 4 HOH A 224 824 826 HOH HOH . I 4 HOH A 225 825 827 HOH HOH . I 4 HOH A 226 826 828 HOH HOH . I 4 HOH A 227 827 829 HOH HOH . I 4 HOH A 228 828 830 HOH HOH . I 4 HOH A 229 829 831 HOH HOH . I 4 HOH A 230 830 832 HOH HOH . I 4 HOH A 231 831 833 HOH HOH . I 4 HOH A 232 832 834 HOH HOH . I 4 HOH A 233 833 835 HOH HOH . I 4 HOH A 234 834 836 HOH HOH . I 4 HOH A 235 835 837 HOH HOH . I 4 HOH A 236 836 838 HOH HOH . I 4 HOH A 237 837 839 HOH HOH . I 4 HOH A 238 838 840 HOH HOH . I 4 HOH A 239 839 842 HOH HOH . I 4 HOH A 240 840 846 HOH HOH . I 4 HOH A 241 841 843 HOH HOH . I 4 HOH A 242 842 844 HOH HOH . I 4 HOH A 243 843 845 HOH HOH . I 4 HOH A 244 844 854 HOH HOH . I 4 HOH A 245 845 847 HOH HOH . I 4 HOH A 246 846 848 HOH HOH . I 4 HOH A 247 847 849 HOH HOH . I 4 HOH A 248 848 850 HOH HOH . I 4 HOH A 249 849 851 HOH HOH . I 4 HOH A 250 850 852 HOH HOH . I 4 HOH A 251 851 853 HOH HOH . I 4 HOH A 252 852 856 HOH HOH . I 4 HOH A 253 853 857 HOH HOH . I 4 HOH A 254 854 858 HOH HOH . I 4 HOH A 255 855 859 HOH HOH . I 4 HOH A 256 856 860 HOH HOH . I 4 HOH A 257 857 861 HOH HOH . I 4 HOH A 258 858 863 HOH HOH . I 4 HOH A 259 859 862 HOH HOH . I 4 HOH A 260 860 864 HOH HOH . I 4 HOH A 261 861 865 HOH HOH . I 4 HOH A 262 862 866 HOH HOH . I 4 HOH A 263 863 867 HOH HOH . I 4 HOH A 264 864 868 HOH HOH . I 4 HOH A 265 865 869 HOH HOH . I 4 HOH A 266 866 870 HOH HOH . I 4 HOH A 267 867 871 HOH HOH . I 4 HOH A 268 868 872 HOH HOH . I 4 HOH A 269 869 873 HOH HOH . I 4 HOH A 270 870 874 HOH HOH . I 4 HOH A 271 871 875 HOH HOH . I 4 HOH A 272 872 876 HOH HOH . I 4 HOH A 273 873 878 HOH HOH . I 4 HOH A 274 874 879 HOH HOH . I 4 HOH A 275 875 880 HOH HOH . I 4 HOH A 276 876 881 HOH HOH . I 4 HOH A 277 877 883 HOH HOH . I 4 HOH A 278 878 884 HOH HOH . I 4 HOH A 279 879 885 HOH HOH . I 4 HOH A 280 880 886 HOH HOH . I 4 HOH A 281 881 887 HOH HOH . I 4 HOH A 282 882 888 HOH HOH . I 4 HOH A 283 883 889 HOH HOH . I 4 HOH A 284 884 890 HOH HOH . I 4 HOH A 285 885 891 HOH HOH . I 4 HOH A 286 886 892 HOH HOH . I 4 HOH A 287 887 893 HOH HOH . I 4 HOH A 288 888 894 HOH HOH . I 4 HOH A 289 889 895 HOH HOH . I 4 HOH A 290 890 896 HOH HOH . I 4 HOH A 291 891 897 HOH HOH . I 4 HOH A 292 892 898 HOH HOH . I 4 HOH A 293 893 899 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 3 _atom_site.Cartn_x -42.476 _atom_site.Cartn_y 45.749 _atom_site.Cartn_z 9.43 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 81.6 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 506 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #