data_6KDT
#
_model_server_result.job_id            UCWwtdxxfJKSRvEBUkYabg 
_model_server_result.datetime_utc      '2024-11-04 22:48:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6kdt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":902}' 
#
_entry.id    6KDT 
#
_exptl.entry_id    6KDT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              46.025 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FORMIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6KDT 
_cell.length_a            60.35 
_cell.length_b            240.784 
_cell.length_c            232.131 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KDT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    'C 2c 2' 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L 1 1 
A,B,E,F,I,J 2 1 
C,D,G,H,K,L 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 H N N 
#
_chem_comp.formula           'C H2 O2' 
_chem_comp.formula_weight    46.025 
_chem_comp.id                FMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FORMIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C O1 FMT doub 83 n n 
C O2 FMT sing 84 n n 
C H FMT sing 85 n n 
O2 HO2 FMT sing 86 n n 
#
_atom_sites.entry_id                     6KDT 
_atom_sites.fract_transf_matrix[1][1]    0.01657 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004153 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004308 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SAH A 1 901 900 SAH SAH . 
F 4 FMT A 1 902 2 FMT FMT . 
G 3 SAH D 1 901 900 SAH SAH . 
H 4 FMT D 1 902 1 FMT FMT . 
I 5 HOH A 1 1001 182 HOH HOH . 
I 5 HOH A 2 1002 171 HOH HOH . 
I 5 HOH A 3 1003 162 HOH HOH . 
I 5 HOH A 4 1004 54 HOH HOH . 
I 5 HOH A 5 1005 38 HOH HOH . 
I 5 HOH A 6 1006 59 HOH HOH . 
I 5 HOH A 7 1007 51 HOH HOH . 
I 5 HOH A 8 1008 56 HOH HOH . 
I 5 HOH A 9 1009 5 HOH HOH . 
I 5 HOH A 10 1010 55 HOH HOH . 
I 5 HOH A 11 1011 42 HOH HOH . 
I 5 HOH A 12 1012 163 HOH HOH . 
I 5 HOH A 13 1013 12 HOH HOH . 
I 5 HOH A 14 1014 32 HOH HOH . 
I 5 HOH A 15 1015 52 HOH HOH . 
I 5 HOH A 16 1016 36 HOH HOH . 
I 5 HOH A 17 1017 166 HOH HOH . 
I 5 HOH A 18 1018 49 HOH HOH . 
I 5 HOH A 19 1019 16 HOH HOH . 
I 5 HOH A 20 1020 22 HOH HOH . 
I 5 HOH A 21 1021 27 HOH HOH . 
I 5 HOH A 22 1022 159 HOH HOH . 
I 5 HOH A 23 1023 14 HOH HOH . 
I 5 HOH A 24 1024 19 HOH HOH . 
I 5 HOH A 25 1025 21 HOH HOH . 
I 5 HOH A 26 1026 44 HOH HOH . 
I 5 HOH A 27 1027 174 HOH HOH . 
I 5 HOH A 28 1028 58 HOH HOH . 
I 5 HOH A 29 1029 170 HOH HOH . 
I 5 HOH A 30 1030 4 HOH HOH . 
I 5 HOH A 31 1031 13 HOH HOH . 
I 5 HOH A 32 1032 48 HOH HOH . 
I 5 HOH A 33 1033 155 HOH HOH . 
I 5 HOH A 34 1034 7 HOH HOH . 
I 5 HOH A 35 1035 172 HOH HOH . 
I 5 HOH A 36 1036 18 HOH HOH . 
I 5 HOH A 37 1037 41 HOH HOH . 
I 5 HOH A 38 1038 50 HOH HOH . 
I 5 HOH A 39 1039 140 HOH HOH . 
I 5 HOH A 40 1040 153 HOH HOH . 
I 5 HOH A 41 1041 31 HOH HOH . 
I 5 HOH A 42 1042 43 HOH HOH . 
I 5 HOH A 43 1043 157 HOH HOH . 
I 5 HOH A 44 1044 158 HOH HOH . 
I 5 HOH A 45 1045 20 HOH HOH . 
I 5 HOH A 46 1046 17 HOH HOH . 
I 5 HOH A 47 1047 57 HOH HOH . 
I 5 HOH A 48 1048 180 HOH HOH . 
I 5 HOH A 49 1049 185 HOH HOH . 
I 5 HOH A 50 1050 45 HOH HOH . 
I 5 HOH A 51 1051 23 HOH HOH . 
I 5 HOH A 52 1052 11 HOH HOH . 
I 5 HOH A 53 1053 8 HOH HOH . 
I 5 HOH A 54 1054 154 HOH HOH . 
I 5 HOH A 55 1055 142 HOH HOH . 
I 5 HOH A 56 1056 26 HOH HOH . 
J 5 HOH B 1 401 169 HOH HOH . 
J 5 HOH B 2 402 66 HOH HOH . 
J 5 HOH B 3 403 186 HOH HOH . 
J 5 HOH B 4 404 10 HOH HOH . 
J 5 HOH B 5 405 173 HOH HOH . 
J 5 HOH B 6 406 161 HOH HOH . 
J 5 HOH B 7 407 160 HOH HOH . 
J 5 HOH B 8 408 60 HOH HOH . 
J 5 HOH B 9 409 3 HOH HOH . 
J 5 HOH B 10 410 63 HOH HOH . 
J 5 HOH B 11 411 175 HOH HOH . 
J 5 HOH B 12 412 65 HOH HOH . 
J 5 HOH B 13 413 64 HOH HOH . 
J 5 HOH B 14 414 46 HOH HOH . 
J 5 HOH B 15 415 61 HOH HOH . 
K 5 HOH C 1 401 183 HOH HOH . 
K 5 HOH C 2 402 78 HOH HOH . 
K 5 HOH C 3 403 188 HOH HOH . 
K 5 HOH C 4 404 92 HOH HOH . 
K 5 HOH C 5 405 90 HOH HOH . 
K 5 HOH C 6 406 81 HOH HOH . 
K 5 HOH C 7 407 80 HOH HOH . 
K 5 HOH C 8 408 71 HOH HOH . 
K 5 HOH C 9 409 76 HOH HOH . 
K 5 HOH C 10 410 84 HOH HOH . 
K 5 HOH C 11 411 77 HOH HOH . 
K 5 HOH C 12 412 67 HOH HOH . 
K 5 HOH C 13 413 150 HOH HOH . 
K 5 HOH C 14 414 94 HOH HOH . 
K 5 HOH C 15 415 86 HOH HOH . 
K 5 HOH C 16 416 89 HOH HOH . 
K 5 HOH C 17 417 144 HOH HOH . 
K 5 HOH C 18 418 87 HOH HOH . 
K 5 HOH C 19 419 88 HOH HOH . 
K 5 HOH C 20 420 85 HOH HOH . 
K 5 HOH C 21 421 143 HOH HOH . 
K 5 HOH C 22 422 95 HOH HOH . 
K 5 HOH C 23 423 93 HOH HOH . 
K 5 HOH C 24 424 176 HOH HOH . 
K 5 HOH C 25 425 151 HOH HOH . 
K 5 HOH C 26 426 15 HOH HOH . 
K 5 HOH C 27 427 69 HOH HOH . 
K 5 HOH C 28 428 152 HOH HOH . 
L 5 HOH D 1 1001 168 HOH HOH . 
L 5 HOH D 2 1002 134 HOH HOH . 
L 5 HOH D 3 1003 189 HOH HOH . 
L 5 HOH D 4 1004 102 HOH HOH . 
L 5 HOH D 5 1005 116 HOH HOH . 
L 5 HOH D 6 1006 133 HOH HOH . 
L 5 HOH D 7 1007 124 HOH HOH . 
L 5 HOH D 8 1008 30 HOH HOH . 
L 5 HOH D 9 1009 177 HOH HOH . 
L 5 HOH D 10 1010 117 HOH HOH . 
L 5 HOH D 11 1011 104 HOH HOH . 
L 5 HOH D 12 1012 119 HOH HOH . 
L 5 HOH D 13 1013 120 HOH HOH . 
L 5 HOH D 14 1014 167 HOH HOH . 
L 5 HOH D 15 1015 139 HOH HOH . 
L 5 HOH D 16 1016 191 HOH HOH . 
L 5 HOH D 17 1017 178 HOH HOH . 
L 5 HOH D 18 1018 105 HOH HOH . 
L 5 HOH D 19 1019 131 HOH HOH . 
L 5 HOH D 20 1020 29 HOH HOH . 
L 5 HOH D 21 1021 97 HOH HOH . 
L 5 HOH D 22 1022 98 HOH HOH . 
L 5 HOH D 23 1023 128 HOH HOH . 
L 5 HOH D 24 1024 72 HOH HOH . 
L 5 HOH D 25 1025 127 HOH HOH . 
L 5 HOH D 26 1026 99 HOH HOH . 
L 5 HOH D 27 1027 107 HOH HOH . 
L 5 HOH D 28 1028 35 HOH HOH . 
L 5 HOH D 29 1029 114 HOH HOH . 
L 5 HOH D 30 1030 121 HOH HOH . 
L 5 HOH D 31 1031 179 HOH HOH . 
L 5 HOH D 32 1032 130 HOH HOH . 
L 5 HOH D 33 1033 28 HOH HOH . 
L 5 HOH D 34 1034 106 HOH HOH . 
L 5 HOH D 35 1035 83 HOH HOH . 
L 5 HOH D 36 1036 145 HOH HOH . 
L 5 HOH D 37 1037 184 HOH HOH . 
L 5 HOH D 38 1038 34 HOH HOH . 
L 5 HOH D 39 1039 123 HOH HOH . 
L 5 HOH D 40 1040 146 HOH HOH . 
L 5 HOH D 41 1041 122 HOH HOH . 
L 5 HOH D 42 1042 190 HOH HOH . 
L 5 HOH D 43 1043 129 HOH HOH . 
L 5 HOH D 44 1044 118 HOH HOH . 
L 5 HOH D 45 1045 115 HOH HOH . 
L 5 HOH D 46 1046 109 HOH HOH . 
L 5 HOH D 47 1047 147 HOH HOH . 
L 5 HOH D 48 1048 110 HOH HOH . 
L 5 HOH D 49 1049 148 HOH HOH . 
L 5 HOH D 50 1050 187 HOH HOH . 
L 5 HOH D 51 1051 74 HOH HOH . 
L 5 HOH D 52 1052 75 HOH HOH . 
L 5 HOH D 53 1053 156 HOH HOH . 
L 5 HOH D 54 1054 149 HOH HOH . 
L 5 HOH D 55 1055 100 HOH HOH . 
L 5 HOH D 56 1056 136 HOH HOH . 
L 5 HOH D 57 1057 112 HOH HOH . 
L 5 HOH D 58 1058 135 HOH HOH . 
L 5 HOH D 59 1059 25 HOH HOH . 
L 5 HOH D 60 1060 113 HOH HOH . 
L 5 HOH D 61 1061 101 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C FMT . . . F 4 -8.878 34.141 -13.407 1 57.51 ? C FMT 902 A 1 
HETATM 2 O O1 FMT . . . F 4 -7.659 33.935 -13.329 1 55.72 ? O1 FMT 902 A 1 
HETATM 3 O O2 FMT . . . F 4 -9.484 34.493 -14.434 1 55.76 ? O2 FMT 902 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           3 
#