data_6KE3
#
_model_server_result.job_id            eELs0JX795_UI7PxFhut_A 
_model_server_result.datetime_utc      '2024-12-21 16:40:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ke3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":401}' 
#
_entry.id    6KE3 
#
_exptl.entry_id    6KE3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              665.441 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          100.38 
_cell.angle_gamma         90 
_cell.entry_id            6KE3 
_cell.length_a            99.365 
_cell.length_b            162.669 
_cell.length_c            114.776 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KE3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I 1 1 
C,D,J 2 1 
E,F,K 3 1 
G,H,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
#
_chem_comp.formula           'C21 H29 N7 O14 P2' 
_chem_comp.formula_weight    665.441 
_chem_comp.id                NAI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     NADH 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAI doub 235 n n 
PA O2A NAI sing 236 n n 
PA O5B NAI sing 237 n n 
PA O3 NAI sing 238 n n 
O2A HOA2 NAI sing 239 n n 
O5B C5B NAI sing 240 n n 
C5B C4B NAI sing 241 n n 
C5B H51A NAI sing 242 n n 
C5B H52A NAI sing 243 n n 
C4B O4B NAI sing 244 n n 
C4B C3B NAI sing 245 n n 
C4B H4B NAI sing 246 n n 
O4B C1B NAI sing 247 n n 
C3B O3B NAI sing 248 n n 
C3B C2B NAI sing 249 n n 
C3B H3B NAI sing 250 n n 
O3B HO3A NAI sing 251 n n 
C2B O2B NAI sing 252 n n 
C2B C1B NAI sing 253 n n 
C2B H2B NAI sing 254 n n 
O2B HO2A NAI sing 255 n n 
C1B N9A NAI sing 256 n n 
C1B H1B NAI sing 257 n n 
N9A C8A NAI sing 258 n y 
N9A C4A NAI sing 259 n y 
C8A N7A NAI doub 260 n y 
C8A H8A NAI sing 261 n n 
N7A C5A NAI sing 262 n y 
C5A C6A NAI sing 263 n y 
C5A C4A NAI doub 264 n y 
C6A N6A NAI sing 265 n n 
C6A N1A NAI doub 266 n y 
N6A H61A NAI sing 267 n n 
N6A H62A NAI sing 268 n n 
N1A C2A NAI sing 269 n y 
C2A N3A NAI doub 270 n y 
C2A H2A NAI sing 271 n n 
N3A C4A NAI sing 272 n y 
O3 PN NAI sing 273 n n 
PN O1N NAI sing 274 n n 
PN O2N NAI doub 275 n n 
PN O5D NAI sing 276 n n 
O1N HO1N NAI sing 277 n n 
O5D C5D NAI sing 278 n n 
C5D C4D NAI sing 279 n n 
C5D H51N NAI sing 280 n n 
C5D H52N NAI sing 281 n n 
C4D O4D NAI sing 282 n n 
C4D C3D NAI sing 283 n n 
C4D H4D NAI sing 284 n n 
O4D C1D NAI sing 285 n n 
C3D O3D NAI sing 286 n n 
C3D C2D NAI sing 287 n n 
C3D H3D NAI sing 288 n n 
O3D HO3N NAI sing 289 n n 
C2D O2D NAI sing 290 n n 
C2D C1D NAI sing 291 n n 
C2D H2D NAI sing 292 n n 
O2D HO2N NAI sing 293 n n 
C1D N1N NAI sing 294 n n 
C1D H1D NAI sing 295 n n 
N1N C2N NAI sing 296 n n 
N1N C6N NAI sing 297 n n 
C2N C3N NAI doub 298 n n 
C2N H2N NAI sing 299 n n 
C3N C7N NAI sing 300 n n 
C3N C4N NAI sing 301 n n 
C7N O7N NAI doub 302 n n 
C7N N7N NAI sing 303 n n 
N7N H71N NAI sing 304 n n 
N7N H72N NAI sing 305 n n 
C4N C5N NAI sing 306 n n 
C4N H4N NAI sing 307 n n 
C4N H42N NAI sing 308 n n 
C5N C6N NAI doub 309 n n 
C5N H5N NAI sing 310 n n 
C6N H6N NAI sing 311 n n 
#
_atom_sites.entry_id                     6KE3 
_atom_sites.fract_transf_matrix[1][1]    0.010064 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001843 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006147 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008858 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 NAI A 1 401 1 NAI NAI . 
J 3 NAI C 1 401 4 NAI NAI . 
K 3 NAI E 1 401 3 NAI NAI . 
L 3 NAI G 1 401 2 NAI NAI . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAI . . . L 3 19.074 -38.648 -37.83 1 98.28 ? PA NAI 401 G 1 
HETATM 2 O O1A NAI . . . L 3 18.335 -39.036 -39.051 1 98.28 ? O1A NAI 401 G 1 
HETATM 3 O O2A NAI . . . L 3 20.402 -39.249 -37.635 1 98.28 ? O2A NAI 401 G 1 
HETATM 4 O O5B NAI . . . L 3 19.174 -37.077 -37.962 1 98.28 ? O5B NAI 401 G 1 
HETATM 5 C C5B NAI . . . L 3 19.592 -36.235 -36.906 1 98.28 ? C5B NAI 401 G 1 
HETATM 6 C C4B NAI . . . L 3 20.129 -34.96 -37.522 1 98.28 ? C4B NAI 401 G 1 
HETATM 7 O O4B NAI . . . L 3 21.049 -35.313 -38.542 1 98.28 ? O4B NAI 401 G 1 
HETATM 8 C C3B NAI . . . L 3 19.03 -34.187 -38.218 1 98.28 ? C3B NAI 401 G 1 
HETATM 9 O O3B NAI . . . L 3 18.909 -32.88 -37.662 1 98.28 ? O3B NAI 401 G 1 
HETATM 10 C C2B NAI . . . L 3 19.437 -34.135 -39.677 1 98.28 ? C2B NAI 401 G 1 
HETATM 11 O O2B NAI . . . L 3 19.258 -32.855 -40.274 1 98.28 ? O2B NAI 401 G 1 
HETATM 12 C C1B NAI . . . L 3 20.89 -34.484 -39.673 1 98.28 ? C1B NAI 401 G 1 
HETATM 13 N N9A NAI . . . L 3 21.102 -35.302 -40.852 1 98.28 ? N9A NAI 401 G 1 
HETATM 14 C C8A NAI . . . L 3 21.01 -36.624 -40.882 1 98.28 ? C8A NAI 401 G 1 
HETATM 15 N N7A NAI . . . L 3 21.259 -37.114 -42.114 1 98.28 ? N7A NAI 401 G 1 
HETATM 16 C C5A NAI . . . L 3 21.508 -36.071 -42.888 1 98.28 ? C5A NAI 401 G 1 
HETATM 17 C C6A NAI . . . L 3 21.836 -35.884 -44.292 1 98.28 ? C6A NAI 401 G 1 
HETATM 18 N N6A NAI . . . L 3 21.932 -36.945 -45.108 1 98.28 ? N6A NAI 401 G 1 
HETATM 19 N N1A NAI . . . L 3 22.03 -34.63 -44.726 1 98.28 ? N1A NAI 401 G 1 
HETATM 20 C C2A NAI . . . L 3 21.927 -33.567 -43.922 1 98.28 ? C2A NAI 401 G 1 
HETATM 21 N N3A NAI . . . L 3 21.622 -33.669 -42.623 1 98.28 ? N3A NAI 401 G 1 
HETATM 22 C C4A NAI . . . L 3 21.406 -34.875 -42.059 1 98.28 ? C4A NAI 401 G 1 
HETATM 23 O O3 NAI . . . L 3 18.23 -38.924 -36.507 1 98.28 ? O3 NAI 401 G 1 
HETATM 24 P PN NAI . . . L 3 16.684 -38.559 -36.485 1 98.28 ? PN NAI 401 G 1 
HETATM 25 O O1N NAI . . . L 3 16.457 -37.872 -37.78 1 98.28 ? O1N NAI 401 G 1 
HETATM 26 O O2N NAI . . . L 3 16.22 -37.939 -35.208 1 98.28 ? O2N NAI 401 G 1 
HETATM 27 O O5D NAI . . . L 3 15.99 -39.975 -36.558 1 98.28 ? O5D NAI 401 G 1 
HETATM 28 C C5D NAI . . . L 3 14.999 -40.186 -37.548 1 98.28 ? C5D NAI 401 G 1 
HETATM 29 C C4D NAI . . . L 3 14.744 -41.677 -37.6 1 98.28 ? C4D NAI 401 G 1 
HETATM 30 O O4D NAI . . . L 3 15.865 -42.335 -38.157 1 98.28 ? O4D NAI 401 G 1 
HETATM 31 C C3D NAI . . . L 3 14.621 -42.255 -36.213 1 98.28 ? C3D NAI 401 G 1 
HETATM 32 O O3D NAI . . . L 3 13.258 -42.568 -35.969 1 98.28 ? O3D NAI 401 G 1 
HETATM 33 C C2D NAI . . . L 3 15.535 -43.463 -36.196 1 98.28 ? C2D NAI 401 G 1 
HETATM 34 O O2D NAI . . . L 3 14.882 -44.63 -35.74 1 98.28 ? O2D NAI 401 G 1 
HETATM 35 C C1D NAI . . . L 3 15.923 -43.64 -37.631 1 98.28 ? C1D NAI 401 G 1 
HETATM 36 N N1N NAI . . . L 3 17.275 -44.131 -37.767 1 98.28 ? N1N NAI 401 G 1 
HETATM 37 C C2N NAI . . . L 3 17.572 -44.914 -38.802 1 98.28 ? C2N NAI 401 G 1 
HETATM 38 C C3N NAI . . . L 3 18.851 -45.423 -39.005 1 98.28 ? C3N NAI 401 G 1 
HETATM 39 C C7N NAI . . . L 3 19.111 -46.288 -40.199 1 98.28 ? C7N NAI 401 G 1 
HETATM 40 O O7N NAI . . . L 3 20.028 -47.079 -40.182 1 98.28 ? O7N NAI 401 G 1 
HETATM 41 N N7N NAI . . . L 3 18.331 -46.159 -41.257 1 98.28 ? N7N NAI 401 G 1 
HETATM 42 C C4N NAI . . . L 3 19.971 -45.115 -38.042 1 98.28 ? C4N NAI 401 G 1 
HETATM 43 C C5N NAI . . . L 3 19.51 -44.256 -36.967 1 98.28 ? C5N NAI 401 G 1 
HETATM 44 C C6N NAI . . . L 3 18.199 -43.798 -36.88 1 98.28 ? C6N NAI 401 G 1 
#
_model_server_stats.io_time_ms              50 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           248 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           44 
#