data_6KE4 # _model_server_result.job_id lCLT-sJZVgloyeiytaOAhw _model_server_result.datetime_utc '2024-11-22 22:17:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ke4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":205}' # _entry.id 6KE4 # _exptl.entry_id 6KE4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KE4 _cell.length_a 182.642 _cell.length_b 182.642 _cell.length_c 182.642 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KE4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 13 'crystal symmetry operation' 13_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 14 'crystal symmetry operation' 14_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 15 'crystal symmetry operation' 15_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 16 'crystal symmetry operation' 16_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 17 'crystal symmetry operation' 17_555 x,z,-y 1 0 0 0 0 1 0 -1 0 0 0 0 18 'crystal symmetry operation' 18_555 -x,z,y -1 0 0 0 0 1 0 1 0 0 0 0 19 'crystal symmetry operation' 19_555 -x,-z,-y -1 0 0 0 0 -1 0 -1 0 0 0 0 20 'crystal symmetry operation' 20_555 x,-z,y 1 0 0 0 0 -1 0 1 0 0 0 0 21 'crystal symmetry operation' 21_555 z,y,-x 0 0 1 0 1 0 -1 0 0 0 0 0 22 'crystal symmetry operation' 22_555 z,-y,x 0 0 1 0 -1 0 1 0 0 0 0 0 23 'crystal symmetry operation' 23_555 -z,y,x 0 0 -1 0 1 0 1 0 0 0 0 0 24 'crystal symmetry operation' 24_555 -z,-y,-x 0 0 -1 0 -1 0 -1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 28 A GLU 28 1_555 B FE FE . A FE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc2 A OE1 GLN 56 A GLN 56 1_555 C FE FE . A FE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc3 A OE2 GLU 60 A GLU 60 1_555 B FE FE . A FE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc4 A ND1 HIS 63 A HIS 63 1_555 B FE FE . A FE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc5 A OD2 ASP 129 A ASP 129 1_555 I CA CA . A CA 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc6 A OE1 GLU 132 A GLU 132 1_555 I CA CA . A CA 208 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.855 ? metalc ? metalc7 B FE FE . A FE 201 1_555 J O HOH . A HOH 313 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc8 B FE FE . A FE 201 1_555 J O HOH . A HOH 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? metalc ? metalc9 C FE FE . A FE 202 1_555 J O HOH . A HOH 330 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc10 D MG MG . A MG 203 1_555 J O HOH . A HOH 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc11 D MG MG . A MG 203 1_555 J O HOH . A HOH 326 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc12 D MG MG . A MG 203 1_555 J O HOH . A HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc13 D MG MG . A MG 203 1_555 J O HOH . A HOH 403 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc14 E MG MG . A MG 204 1_555 J O HOH . A HOH 356 22_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc15 E MG MG . A MG 204 1_555 J O HOH . A HOH 392 51_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc16 E MG MG . A MG 204 1_555 J O HOH . A HOH 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? metalc ? metalc17 E MG MG . A MG 204 1_555 J O HOH . A HOH 429 72_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? metalc ? metalc18 F MG MG . A MG 205 1_555 J O HOH . A HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? metalc ? metalc19 F MG MG . A MG 205 1_555 J O HOH . A HOH 427 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc20 I CA CA . A CA 208 1_555 J O HOH . A HOH 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6KE4 _atom_sites.fract_transf_matrix[1][1] 0.005475 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005475 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005475 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 201 1 FE FE . C 2 FE A 1 202 2 FE FE . D 3 MG A 1 203 1 MG MG . E 3 MG A 1 204 2 MG MG . F 3 MG A 1 205 3 MG MG . G 4 CL A 1 206 1 CL CL . H 4 CL A 1 207 2 CL CL . I 5 CA A 1 208 1 CA CA . J 6 HOH A 1 301 50 HOH HOH . J 6 HOH A 2 302 77 HOH HOH . J 6 HOH A 3 303 16 HOH HOH . J 6 HOH A 4 304 17 HOH HOH . J 6 HOH A 5 305 102 HOH HOH . J 6 HOH A 6 306 56 HOH HOH . J 6 HOH A 7 307 106 HOH HOH . J 6 HOH A 8 308 91 HOH HOH . J 6 HOH A 9 309 28 HOH HOH . J 6 HOH A 10 310 51 HOH HOH . J 6 HOH A 11 311 82 HOH HOH . J 6 HOH A 12 312 95 HOH HOH . J 6 HOH A 13 313 94 HOH HOH . J 6 HOH A 14 314 111 HOH HOH . J 6 HOH A 15 315 103 HOH HOH . J 6 HOH A 16 316 73 HOH HOH . J 6 HOH A 17 317 108 HOH HOH . J 6 HOH A 18 318 140 HOH HOH . J 6 HOH A 19 319 63 HOH HOH . J 6 HOH A 20 320 13 HOH HOH . J 6 HOH A 21 321 20 HOH HOH . J 6 HOH A 22 322 57 HOH HOH . J 6 HOH A 23 323 22 HOH HOH . J 6 HOH A 24 324 15 HOH HOH . J 6 HOH A 25 325 85 HOH HOH . J 6 HOH A 26 326 133 HOH HOH . J 6 HOH A 27 327 127 HOH HOH . J 6 HOH A 28 328 6 HOH HOH . J 6 HOH A 29 329 54 HOH HOH . J 6 HOH A 30 330 142 HOH HOH . J 6 HOH A 31 331 32 HOH HOH . J 6 HOH A 32 332 65 HOH HOH . J 6 HOH A 33 333 23 HOH HOH . J 6 HOH A 34 334 34 HOH HOH . J 6 HOH A 35 335 118 HOH HOH . J 6 HOH A 36 336 86 HOH HOH . J 6 HOH A 37 337 110 HOH HOH . J 6 HOH A 38 338 9 HOH HOH . J 6 HOH A 39 339 45 HOH HOH . J 6 HOH A 40 340 24 HOH HOH . J 6 HOH A 41 341 129 HOH HOH . J 6 HOH A 42 342 72 HOH HOH . J 6 HOH A 43 343 60 HOH HOH . J 6 HOH A 44 344 121 HOH HOH . J 6 HOH A 45 345 132 HOH HOH . J 6 HOH A 46 346 69 HOH HOH . J 6 HOH A 47 347 62 HOH HOH . J 6 HOH A 48 348 40 HOH HOH . J 6 HOH A 49 349 59 HOH HOH . J 6 HOH A 50 350 114 HOH HOH . J 6 HOH A 51 351 31 HOH HOH . J 6 HOH A 52 352 36 HOH HOH . J 6 HOH A 53 353 49 HOH HOH . J 6 HOH A 54 354 44 HOH HOH . J 6 HOH A 55 355 74 HOH HOH . J 6 HOH A 56 356 134 HOH HOH . J 6 HOH A 57 357 113 HOH HOH . J 6 HOH A 58 358 3 HOH HOH . J 6 HOH A 59 359 25 HOH HOH . J 6 HOH A 60 360 64 HOH HOH . J 6 HOH A 61 361 75 HOH HOH . J 6 HOH A 62 362 70 HOH HOH . J 6 HOH A 63 363 52 HOH HOH . J 6 HOH A 64 364 88 HOH HOH . J 6 HOH A 65 365 18 HOH HOH . J 6 HOH A 66 366 124 HOH HOH . J 6 HOH A 67 367 30 HOH HOH . J 6 HOH A 68 368 97 HOH HOH . J 6 HOH A 69 369 126 HOH HOH . J 6 HOH A 70 370 39 HOH HOH . J 6 HOH A 71 371 47 HOH HOH . J 6 HOH A 72 372 99 HOH HOH . J 6 HOH A 73 373 27 HOH HOH . J 6 HOH A 74 374 14 HOH HOH . J 6 HOH A 75 375 71 HOH HOH . J 6 HOH A 76 376 81 HOH HOH . J 6 HOH A 77 377 48 HOH HOH . J 6 HOH A 78 378 76 HOH HOH . J 6 HOH A 79 379 38 HOH HOH . J 6 HOH A 80 380 46 HOH HOH . J 6 HOH A 81 381 93 HOH HOH . J 6 HOH A 82 382 33 HOH HOH . J 6 HOH A 83 383 78 HOH HOH . J 6 HOH A 84 384 55 HOH HOH . J 6 HOH A 85 385 29 HOH HOH . J 6 HOH A 86 386 2 HOH HOH . J 6 HOH A 87 387 66 HOH HOH . J 6 HOH A 88 388 80 HOH HOH . J 6 HOH A 89 389 105 HOH HOH . J 6 HOH A 90 390 120 HOH HOH . J 6 HOH A 91 391 7 HOH HOH . J 6 HOH A 92 392 98 HOH HOH . J 6 HOH A 93 393 112 HOH HOH . J 6 HOH A 94 394 4 HOH HOH . J 6 HOH A 95 395 1 HOH HOH . J 6 HOH A 96 396 42 HOH HOH . J 6 HOH A 97 397 19 HOH HOH . J 6 HOH A 98 398 138 HOH HOH . J 6 HOH A 99 399 136 HOH HOH . J 6 HOH A 100 400 96 HOH HOH . J 6 HOH A 101 401 26 HOH HOH . J 6 HOH A 102 402 101 HOH HOH . J 6 HOH A 103 403 8 HOH HOH . J 6 HOH A 104 404 104 HOH HOH . J 6 HOH A 105 405 122 HOH HOH . J 6 HOH A 106 406 119 HOH HOH . J 6 HOH A 107 407 53 HOH HOH . J 6 HOH A 108 408 89 HOH HOH . J 6 HOH A 109 409 58 HOH HOH . J 6 HOH A 110 410 115 HOH HOH . J 6 HOH A 111 411 43 HOH HOH . J 6 HOH A 112 412 5 HOH HOH . J 6 HOH A 113 413 61 HOH HOH . J 6 HOH A 114 414 35 HOH HOH . J 6 HOH A 115 415 68 HOH HOH . J 6 HOH A 116 416 107 HOH HOH . J 6 HOH A 117 417 128 HOH HOH . J 6 HOH A 118 418 67 HOH HOH . J 6 HOH A 119 419 37 HOH HOH . J 6 HOH A 120 420 123 HOH HOH . J 6 HOH A 121 421 109 HOH HOH . J 6 HOH A 122 422 21 HOH HOH . J 6 HOH A 123 423 116 HOH HOH . J 6 HOH A 124 424 92 HOH HOH . J 6 HOH A 125 425 100 HOH HOH . J 6 HOH A 126 426 79 HOH HOH . J 6 HOH A 127 427 131 HOH HOH . J 6 HOH A 128 428 117 HOH HOH . J 6 HOH A 129 429 10 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 3 _atom_site.Cartn_x 29.514 _atom_site.Cartn_y -23.258 _atom_site.Cartn_z 23.506 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 46.69 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 205 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #