data_6KED # _model_server_result.job_id dX9Cc9SdsSK9yKkZSNdFfw _model_server_result.datetime_utc '2024-10-19 03:58:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ked # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6KED # _exptl.entry_id 6KED _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 446.427 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-[2-[2,4-bis(fluoranyl)phenoxy]-5-(methylsulfonylmethyl)pyridin-3-yl]-8-methyl-2H-pyrrolo[1,2-d][1,2,4]triazin-1-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KED _cell.length_a 35.176 _cell.length_b 47.023 _cell.length_c 77.975 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KED _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H16 F2 N4 O4 S' _chem_comp.formula_weight 446.427 _chem_comp.id D7R _chem_comp.mon_nstd_flag . _chem_comp.name 6-[2-[2,4-bis(fluoranyl)phenoxy]-5-(methylsulfonylmethyl)pyridin-3-yl]-8-methyl-2H-pyrrolo[1,2-d][1,2,4]triazin-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 S21 D7R sing 83 n n O23 S21 D7R doub 84 n n S21 O24 D7R doub 85 n n S21 C20 D7R sing 86 n n C10 C9 D7R sing 87 n n C20 C14 D7R sing 88 n n C9 C8 D7R sing 89 n y C9 C5 D7R doub 90 n y C8 C7 D7R doub 91 n y C13 C14 D7R doub 92 n y C13 C12 D7R sing 93 n y C14 C15 D7R sing 94 n y O11 C6 D7R doub 95 n n C5 C6 D7R sing 96 n n C5 N4 D7R sing 97 n y C7 C12 D7R sing 98 n n C7 N4 D7R sing 99 n y C12 C17 D7R doub 100 n y C6 N1 D7R sing 101 n n N4 C3 D7R sing 102 n n C15 N16 D7R doub 103 n y N1 N2 D7R sing 104 n n C3 N2 D7R doub 105 n n C17 N16 D7R sing 106 n y C17 O18 D7R sing 107 n n O18 C19 D7R sing 108 n n F30 C29 D7R sing 109 n n C19 C29 D7R doub 110 n y C19 C25 D7R sing 111 n y C29 C28 D7R sing 112 n y C25 C26 D7R doub 113 n y C28 C27 D7R doub 114 n y C26 C27 D7R sing 115 n y C27 F31 D7R sing 116 n n C10 H1 D7R sing 117 n n C10 H2 D7R sing 118 n n C10 H3 D7R sing 119 n n C13 H4 D7R sing 120 n n C15 H5 D7R sing 121 n n C20 H6 D7R sing 122 n n C20 H7 D7R sing 123 n n C22 H8 D7R sing 124 n n C22 H9 D7R sing 125 n n C22 H10 D7R sing 126 n n C26 H11 D7R sing 127 n n C28 H12 D7R sing 128 n n N1 H13 D7R sing 129 n n C3 H14 D7R sing 130 n n C8 H15 D7R sing 131 n n C25 H16 D7R sing 132 n n # _atom_sites.entry_id 6KED _atom_sites.fract_transf_matrix[1][1] 0.028428 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021266 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012825 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 D7R A 1 201 1 D7R LIG . C 3 HOH A 1 301 31 HOH HOH . C 3 HOH A 2 302 56 HOH HOH . C 3 HOH A 3 303 3 HOH HOH . C 3 HOH A 4 304 40 HOH HOH . C 3 HOH A 5 305 15 HOH HOH . C 3 HOH A 6 306 39 HOH HOH . C 3 HOH A 7 307 36 HOH HOH . C 3 HOH A 8 308 7 HOH HOH . C 3 HOH A 9 309 46 HOH HOH . C 3 HOH A 10 310 8 HOH HOH . C 3 HOH A 11 311 18 HOH HOH . C 3 HOH A 12 312 17 HOH HOH . C 3 HOH A 13 313 12 HOH HOH . C 3 HOH A 14 314 15 HOH HOH . C 3 HOH A 15 315 16 HOH HOH . C 3 HOH A 16 316 18 HOH HOH . C 3 HOH A 17 317 8 HOH HOH . C 3 HOH A 18 318 4 HOH HOH . C 3 HOH A 19 319 54 HOH HOH . C 3 HOH A 20 320 14 HOH HOH . C 3 HOH A 21 321 24 HOH HOH . C 3 HOH A 22 322 13 HOH HOH . C 3 HOH A 23 323 3 HOH HOH . C 3 HOH A 24 324 27 HOH HOH . C 3 HOH A 25 325 28 HOH HOH . C 3 HOH A 26 326 50 HOH HOH . C 3 HOH A 27 327 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 D7R . . . B 2 -12.084 -3.727 -1.941 1 36.35 ? C10 D7R 201 A 1 HETATM 2 C C13 D7R . . . B 2 -8.017 -7.194 -0.943 1 62.03 ? C13 D7R 201 A 1 HETATM 3 C C15 D7R . . . B 2 -6.493 -8.404 0.512 1 52.79 ? C15 D7R 201 A 1 HETATM 4 C C17 D7R . . . B 2 -8.584 -7.74 1.329 1 52.57 ? C17 D7R 201 A 1 HETATM 5 C C20 D7R . . . B 2 -5.756 -7.869 -1.851 1 56.84 ? C20 D7R 201 A 1 HETATM 6 C C22 D7R . . . B 2 -7.206 -7.14 -4.365 1 60.22 ? C22 D7R 201 A 1 HETATM 7 C C26 D7R . . . B 2 -9.547 -7.077 5.959 1 68.12 ? C26 D7R 201 A 1 HETATM 8 C C28 D7R . . . B 2 -8.086 -5.465 4.982 1 69.6 ? C28 D7R 201 A 1 HETATM 9 N N1 D7R . . . B 2 -14.296 -6.6 0.987 1 42.99 ? N1 D7R 201 A 1 HETATM 10 N N2 D7R . . . B 2 -13.42 -7.504 1.5 1 67.05 ? N2 D7R 201 A 1 HETATM 11 C C3 D7R . . . B 2 -12.114 -7.559 1.204 1 36.77 ? C3 D7R 201 A 1 HETATM 12 N N4 D7R . . . B 2 -11.57 -6.643 0.306 1 37.88 ? N4 D7R 201 A 1 HETATM 13 C C5 D7R . . . B 2 -12.387 -5.739 -0.223 1 35.92 ? C5 D7R 201 A 1 HETATM 14 C C6 D7R . . . B 2 -13.796 -5.725 0.144 1 51.01 ? C6 D7R 201 A 1 HETATM 15 C C7 D7R . . . B 2 -10.281 -6.452 -0.162 1 58.01 ? C7 D7R 201 A 1 HETATM 16 C C8 D7R . . . B 2 -10.293 -5.375 -1.042 1 57.16 ? C8 D7R 201 A 1 HETATM 17 C C9 D7R . . . B 2 -11.618 -4.91 -1.088 1 45.24 ? C9 D7R 201 A 1 HETATM 18 O O11 D7R . . . B 2 -14.527 -4.931 -0.336 1 49.19 ? O11 D7R 201 A 1 HETATM 19 C C12 D7R . . . B 2 -8.944 -7.169 0.101 1 50.78 ? C12 D7R 201 A 1 HETATM 20 C C14 D7R . . . B 2 -6.784 -7.826 -0.725 1 61.11 ? C14 D7R 201 A 1 HETATM 21 N N16 D7R . . . B 2 -7.397 -8.346 1.489 1 67.65 ? N16 D7R 201 A 1 HETATM 22 O O18 D7R . . . B 2 -9.514 -7.712 2.38 1 54.28 ? O18 D7R 201 A 1 HETATM 23 C C19 D7R . . . B 2 -9.188 -7.088 3.594 1 48 ? C19 D7R 201 A 1 HETATM 24 S S21 D7R . . . B 2 -6.518 -8.514 -3.371 1 101.39 ? S21 D7R 201 A 1 HETATM 25 O O23 D7R . . . B 2 -5.53 -9.314 -4.103 1 82.13 ? O23 D7R 201 A 1 HETATM 26 O O24 D7R . . . B 2 -7.515 -9.566 -3.149 1 72.47 ? O24 D7R 201 A 1 HETATM 27 C C25 D7R . . . B 2 -9.782 -7.611 4.71 1 51.55 ? C25 D7R 201 A 1 HETATM 28 C C27 D7R . . . B 2 -8.698 -6.001 6.097 1 69.73 ? C27 D7R 201 A 1 HETATM 29 C C29 D7R . . . B 2 -8.334 -6 3.733 1 66.61 ? C29 D7R 201 A 1 HETATM 30 F F30 D7R . . . B 2 -7.705 -5.421 2.672 1 72.96 ? F30 D7R 201 A 1 HETATM 31 F F31 D7R . . . B 2 -8.455 -5.48 7.333 1 73.67 ? F31 D7R 201 A 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #