data_6KEI # _model_server_result.job_id ptBiBr_5WKfmGPXamRyqtA _model_server_result.datetime_utc '2024-11-25 10:36:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6kei # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6KEI # _exptl.entry_id 6KEI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 386.4 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 16-methoxy-11-methyl-6-[(pyridin-2-yl)methoxy]-2-oxa-11-azatetracyclo[8.6.1.03,8.013,17]heptadeca-1(16),3,5,7,9,13(17),14-heptaen-12-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KEI _cell.length_a 32.079 _cell.length_b 47.244 _cell.length_c 79.179 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KEI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H18 N2 O4' _chem_comp.formula_weight 386.4 _chem_comp.id D6U _chem_comp.mon_nstd_flag . _chem_comp.name 16-methoxy-11-methyl-6-[(pyridin-2-yl)methoxy]-2-oxa-11-azatetracyclo[8.6.1.03,8.013,17]heptadeca-1(16),3,5,7,9,13(17),14-heptaen-12-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 O3 D6U sing 83 n n O3 C6 D6U sing 84 n n C5 C6 D6U doub 85 n y C5 C4 D6U sing 86 n y C6 C1 D6U sing 87 n y C4 C3 D6U doub 88 n y C1 O1 D6U sing 89 n n C1 C2 D6U doub 90 n y O1 C11 D6U sing 91 n n C3 C2 D6U sing 92 n y C3 C7 D6U sing 93 n n C2 C8 D6U sing 94 n n C12 C11 D6U doub 95 n y C12 C13 D6U sing 96 n y C11 C10 D6U sing 97 n y C7 O2 D6U doub 98 n n C7 N1 D6U sing 99 n n C13 C14 D6U doub 100 n y C8 N1 D6U sing 101 n n C8 C9 D6U doub 102 n n C10 C9 D6U sing 103 n n C10 C15 D6U doub 104 n y N1 C16 D6U sing 105 n n N2 C20 D6U doub 106 n y N2 C19 D6U sing 107 n y C14 C15 D6U sing 108 n y C14 O4 D6U sing 109 n n C20 C21 D6U sing 110 n y C18 C19 D6U sing 111 n n C18 O4 D6U sing 112 n n C19 C23 D6U doub 113 n y C21 C22 D6U doub 114 n y C23 C22 D6U sing 115 n y C4 H1 D6U sing 116 n n C5 H2 D6U sing 117 n n C9 H3 D6U sing 118 n n C12 H4 D6U sing 119 n n C13 H5 D6U sing 120 n n C15 H6 D6U sing 121 n n C16 H7 D6U sing 122 n n C16 H8 D6U sing 123 n n C16 H9 D6U sing 124 n n C17 H10 D6U sing 125 n n C17 H11 D6U sing 126 n n C17 H12 D6U sing 127 n n C18 H13 D6U sing 128 n n C18 H14 D6U sing 129 n n C20 H15 D6U sing 130 n n C21 H16 D6U sing 131 n n C22 H17 D6U sing 132 n n C23 H18 D6U sing 133 n n # _atom_sites.entry_id 6KEI _atom_sites.fract_transf_matrix[1][1] 0.031173 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021167 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01263 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 D6U A 1 401 401 D6U DRG . C 3 FMT A 1 402 701 FMT FMT . D 3 FMT A 1 403 801 FMT FMT . E 4 HOH A 1 501 80 HOH HOH . E 4 HOH A 2 502 66 HOH HOH . E 4 HOH A 3 503 82 HOH HOH . E 4 HOH A 4 504 102 HOH HOH . E 4 HOH A 5 505 110 HOH HOH . E 4 HOH A 6 506 85 HOH HOH . E 4 HOH A 7 507 91 HOH HOH . E 4 HOH A 8 508 67 HOH HOH . E 4 HOH A 9 509 50 HOH HOH . E 4 HOH A 10 510 21 HOH HOH . E 4 HOH A 11 511 15 HOH HOH . E 4 HOH A 12 512 45 HOH HOH . E 4 HOH A 13 513 40 HOH HOH . E 4 HOH A 14 514 43 HOH HOH . E 4 HOH A 15 515 27 HOH HOH . E 4 HOH A 16 516 63 HOH HOH . E 4 HOH A 17 517 56 HOH HOH . E 4 HOH A 18 518 108 HOH HOH . E 4 HOH A 19 519 54 HOH HOH . E 4 HOH A 20 520 33 HOH HOH . E 4 HOH A 21 521 35 HOH HOH . E 4 HOH A 22 522 86 HOH HOH . E 4 HOH A 23 523 9 HOH HOH . E 4 HOH A 24 524 26 HOH HOH . E 4 HOH A 25 525 16 HOH HOH . E 4 HOH A 26 526 22 HOH HOH . E 4 HOH A 27 527 112 HOH HOH . E 4 HOH A 28 528 5 HOH HOH . E 4 HOH A 29 529 19 HOH HOH . E 4 HOH A 30 530 7 HOH HOH . E 4 HOH A 31 531 20 HOH HOH . E 4 HOH A 32 532 89 HOH HOH . E 4 HOH A 33 533 51 HOH HOH . E 4 HOH A 34 534 13 HOH HOH . E 4 HOH A 35 535 37 HOH HOH . E 4 HOH A 36 536 41 HOH HOH . E 4 HOH A 37 537 39 HOH HOH . E 4 HOH A 38 538 47 HOH HOH . E 4 HOH A 39 539 10 HOH HOH . E 4 HOH A 40 540 3 HOH HOH . E 4 HOH A 41 541 87 HOH HOH . E 4 HOH A 42 542 88 HOH HOH . E 4 HOH A 43 543 52 HOH HOH . E 4 HOH A 44 544 98 HOH HOH . E 4 HOH A 45 545 23 HOH HOH . E 4 HOH A 46 546 28 HOH HOH . E 4 HOH A 47 547 30 HOH HOH . E 4 HOH A 48 548 81 HOH HOH . E 4 HOH A 49 549 106 HOH HOH . E 4 HOH A 50 550 11 HOH HOH . E 4 HOH A 51 551 94 HOH HOH . E 4 HOH A 52 552 38 HOH HOH . E 4 HOH A 53 553 36 HOH HOH . E 4 HOH A 54 554 8 HOH HOH . E 4 HOH A 55 555 101 HOH HOH . E 4 HOH A 56 556 49 HOH HOH . E 4 HOH A 57 557 97 HOH HOH . E 4 HOH A 58 558 61 HOH HOH . E 4 HOH A 59 559 12 HOH HOH . E 4 HOH A 60 560 58 HOH HOH . E 4 HOH A 61 561 18 HOH HOH . E 4 HOH A 62 562 44 HOH HOH . E 4 HOH A 63 563 48 HOH HOH . E 4 HOH A 64 564 73 HOH HOH . E 4 HOH A 65 565 6 HOH HOH . E 4 HOH A 66 566 14 HOH HOH . E 4 HOH A 67 567 104 HOH HOH . E 4 HOH A 68 568 17 HOH HOH . E 4 HOH A 69 569 57 HOH HOH . E 4 HOH A 70 570 74 HOH HOH . E 4 HOH A 71 571 4 HOH HOH . E 4 HOH A 72 572 55 HOH HOH . E 4 HOH A 73 573 31 HOH HOH . E 4 HOH A 74 574 79 HOH HOH . E 4 HOH A 75 575 116 HOH HOH . E 4 HOH A 76 576 29 HOH HOH . E 4 HOH A 77 577 107 HOH HOH . E 4 HOH A 78 578 53 HOH HOH . E 4 HOH A 79 579 72 HOH HOH . E 4 HOH A 80 580 99 HOH HOH . E 4 HOH A 81 581 105 HOH HOH . E 4 HOH A 82 582 75 HOH HOH . E 4 HOH A 83 583 62 HOH HOH . E 4 HOH A 84 584 34 HOH HOH . E 4 HOH A 85 585 24 HOH HOH . E 4 HOH A 86 586 93 HOH HOH . E 4 HOH A 87 587 65 HOH HOH . E 4 HOH A 88 588 92 HOH HOH . E 4 HOH A 89 589 90 HOH HOH . E 4 HOH A 90 590 69 HOH HOH . E 4 HOH A 91 591 111 HOH HOH . E 4 HOH A 92 592 95 HOH HOH . E 4 HOH A 93 593 113 HOH HOH . E 4 HOH A 94 594 109 HOH HOH . E 4 HOH A 95 595 117 HOH HOH . E 4 HOH A 96 596 76 HOH HOH . E 4 HOH A 97 597 60 HOH HOH . E 4 HOH A 98 598 100 HOH HOH . E 4 HOH A 99 599 96 HOH HOH . E 4 HOH A 100 600 103 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 D6U . . . B 2 -11.872 7.259 -1.301 1 18.61 ? C4 D6U 401 A 1 HETATM 2 C C14 D6U . . . B 2 -4.823 7.505 1.547 1 24.91 ? C14 D6U 401 A 1 HETATM 3 C C5 D6U . . . B 2 -11.196 8.301 -2.048 1 19.66 ? C5 D6U 401 A 1 HETATM 4 C C6 D6U . . . B 2 -9.798 8.653 -1.788 1 22.44 ? C6 D6U 401 A 1 HETATM 5 C C11 D6U . . . B 2 -7.039 7.885 0.168 1 23.97 ? C11 D6U 401 A 1 HETATM 6 C C7 D6U . . . B 2 -11.551 5.491 0.611 1 12.85 ? C7 D6U 401 A 1 HETATM 7 C C8 D6U . . . B 2 -9.46 5.929 1.081 1 17.28 ? C8 D6U 401 A 1 HETATM 8 C C9 D6U . . . B 2 -8.087 5.947 1.658 1 21.63 ? C9 D6U 401 A 1 HETATM 9 C C10 D6U . . . B 2 -7.095 6.83 1.212 1 21.91 ? C10 D6U 401 A 1 HETATM 10 C C12 D6U . . . B 2 -5.737 8.453 0.168 1 25.18 ? C12 D6U 401 A 1 HETATM 11 C C13 D6U . . . B 2 -4.873 8.204 0.82 1 26.95 ? C13 D6U 401 A 1 HETATM 12 N N1 D6U . . . B 2 -10.463 5.243 1.321 1 14.86 ? N1 D6U 401 A 1 HETATM 13 N N2 D6U . . . B 2 -0.027 7.181 1.375 1 33.35 ? N2 D6U 401 A 1 HETATM 14 C C3 D6U . . . B 2 -11.179 6.591 -0.321 1 17.33 ? C3 D6U 401 A 1 HETATM 15 C C1 D6U . . . B 2 -9.066 7.982 -0.813 1 23.3 ? C1 D6U 401 A 1 HETATM 16 C C15 D6U . . . B 2 -5.661 6.75 1.939 1 20.74 ? C15 D6U 401 A 1 HETATM 17 C C16 D6U . . . B 2 -10.455 4.219 2.349 1 13.67 ? C16 D6U 401 A 1 HETATM 18 C C17 D6U . . . B 2 -10.061 10.571 -3.116 1 26.61 ? C17 D6U 401 A 1 HETATM 19 C C18 D6U . . . B 2 -2.42 7.883 1.669 1 29.47 ? C18 D6U 401 A 1 HETATM 20 C C19 D6U . . . B 2 -1.212 6.99 2.009 1 28.29 ? C19 D6U 401 A 1 HETATM 21 C C2 D6U . . . B 2 -9.879 6.934 -0.102 1 18.58 ? C2 D6U 401 A 1 HETATM 22 C C20 D6U . . . B 2 1.033 6.404 1.657 1 32.32 ? C20 D6U 401 A 1 HETATM 23 C C21 D6U . . . B 2 0.941 5.403 2.602 1 30.07 ? C21 D6U 401 A 1 HETATM 24 C C22 D6U . . . B 2 -0.232 5.192 3.255 1 29.69 ? C22 D6U 401 A 1 HETATM 25 C C23 D6U . . . B 2 -1.321 5.978 2.97 1 29.82 ? C23 D6U 401 A 1 HETATM 26 O O1 D6U . . . B 2 -7.814 8.273 -0.559 1 31.12 ? O1 D6U 401 A 1 HETATM 27 O O2 D6U . . . B 2 -12.604 4.954 0.689 1 14.41 ? O2 D6U 401 A 1 HETATM 28 O O3 D6U . . . B 2 -9.172 9.658 -2.531 1 27.87 ? O3 D6U 401 A 1 HETATM 29 O O4 D6U . . . B 2 -3.6 7.356 2.234 1 28.12 ? O4 D6U 401 A 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 29 #