data_6KFQ
#
_model_server_result.job_id            uSdjRxkwdaiE1nvn15D7qQ 
_model_server_result.datetime_utc      '2024-10-10 06:29:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6kfq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":309}' 
#
_entry.id    6KFQ 
#
_exptl.entry_id    6KFQ 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6KFQ 
_cell.length_a            29.93 
_cell.length_b            68.41 
_cell.length_c            107.91 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KFQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
#
_struct_conn.conn_type_id                   covale 
_struct_conn.details                        ? 
_struct_conn.id                             covale1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            NZ 
_struct_conn.ptnr1_label_comp_id            LYS 
_struct_conn.ptnr1_label_seq_id             209 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             LYS 
_struct_conn.ptnr1_auth_seq_id              209 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            R 
_struct_conn.ptnr2_label_atom_id            C15 
_struct_conn.ptnr2_label_comp_id            RET 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             RET 
_struct_conn.ptnr2_auth_seq_id              317 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                1.429 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                MPG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '[(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C3 MPG sing 216 n n 
C2 C1 MPG sing 217 n n 
C3 C4 MPG sing 218 n n 
C4 C5 MPG sing 219 n n 
C5 C6 MPG sing 220 n n 
C6 C7 MPG sing 221 n n 
C7 C8 MPG sing 222 n n 
C8 C9 MPG sing 223 n n 
C9 C10 MPG doub 224 z n 
C10 C11 MPG sing 225 n n 
C11 C12 MPG sing 226 n n 
C12 C13 MPG sing 227 n n 
C13 C14 MPG sing 228 n n 
C14 C15 MPG sing 229 n n 
C15 C16 MPG sing 230 n n 
C16 C17 MPG sing 231 n n 
C17 C18 MPG sing 232 n n 
O1 C1 MPG sing 233 n n 
O1 CX3 MPG sing 234 n n 
CXD O2 MPG sing 235 n n 
CXD C21 MPG sing 236 n n 
CXD CX3 MPG sing 237 n n 
C21 O3 MPG sing 238 n n 
C2 H21C MPG sing 239 n n 
C2 H22C MPG sing 240 n n 
C3 H31C MPG sing 241 n n 
C3 H32C MPG sing 242 n n 
CX3 O4 MPG doub 243 n n 
C4 H41C MPG sing 244 n n 
C4 H42C MPG sing 245 n n 
C5 H51C MPG sing 246 n n 
C5 H52C MPG sing 247 n n 
C6 H61C MPG sing 248 n n 
C6 H62C MPG sing 249 n n 
C7 H71C MPG sing 250 n n 
C7 H72C MPG sing 251 n n 
C8 H81C MPG sing 252 n n 
C8 H82C MPG sing 253 n n 
C9 H9 MPG sing 254 n n 
C10 H10 MPG sing 255 n n 
C11 H111 MPG sing 256 n n 
C11 H112 MPG sing 257 n n 
C12 H121 MPG sing 258 n n 
C12 H122 MPG sing 259 n n 
C13 H131 MPG sing 260 n n 
C13 H132 MPG sing 261 n n 
C14 H141 MPG sing 262 n n 
C14 H142 MPG sing 263 n n 
C15 H151 MPG sing 264 n n 
C15 H152 MPG sing 265 n n 
C16 H161 MPG sing 266 n n 
C16 H162 MPG sing 267 n n 
C17 H171 MPG sing 268 n n 
C17 H172 MPG sing 269 n n 
C18 H181 MPG sing 270 n n 
C18 H182 MPG sing 271 n n 
C18 H183 MPG sing 272 n n 
C1 HX31 MPG sing 273 n n 
C1 HX32 MPG sing 274 n n 
CXD HXD MPG sing 275 n n 
O2 H2 MPG sing 276 n n 
C21 H211 MPG sing 277 n n 
C21 H212 MPG sing 278 n n 
O3 H3 MPG sing 279 n n 
#
_atom_sites.entry_id                     6KFQ 
_atom_sites.fract_transf_matrix[1][1]    0.033411 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014618 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009267 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 MPG A 1 301 1 MPG MPG . 
C 2 MPG A 1 302 2 MPG MPG . 
D 2 MPG A 1 303 3 MPG MPG . 
E 2 MPG A 1 304 4 MPG MPG . 
F 2 MPG A 1 305 5 MPG MPG . 
G 2 MPG A 1 306 6 MPG MPG . 
H 2 MPG A 1 307 7 MPG MPG . 
I 2 MPG A 1 308 8 MPG MPG . 
J 2 MPG A 1 309 9 MPG MPG . 
K 2 MPG A 1 310 10 MPG MPG . 
L 2 MPG A 1 311 11 MPG MPG . 
M 2 MPG A 1 312 12 MPG MPG . 
N 2 MPG A 1 313 13 MPG MPG . 
O 2 MPG A 1 314 14 MPG MPG . 
P 2 MPG A 1 315 15 MPG MPG . 
Q 2 MPG A 1 316 16 MPG MPG . 
R 3 RET A 1 317 294 RET RET . 
S 4 SO4 A 1 318 301 SO4 SO4 . 
T 4 SO4 A 1 319 401 SO4 SO4 . 
U 5 HOH A 1 401 2 HOH HOH . 
U 5 HOH A 2 402 13 HOH HOH . 
U 5 HOH A 3 403 11 HOH HOH . 
U 5 HOH A 4 404 10 HOH HOH . 
U 5 HOH A 5 405 19 HOH HOH . 
U 5 HOH A 6 406 16 HOH HOH . 
U 5 HOH A 7 407 14 HOH HOH . 
U 5 HOH A 8 408 17 HOH HOH . 
U 5 HOH A 9 409 1 HOH HOH . 
U 5 HOH A 10 410 5 HOH HOH . 
U 5 HOH A 11 411 9 HOH HOH . 
U 5 HOH A 12 412 21 HOH HOH . 
U 5 HOH A 13 413 12 HOH HOH . 
U 5 HOH A 14 414 3 HOH HOH . 
U 5 HOH A 15 415 6 HOH HOH . 
U 5 HOH A 16 416 8 HOH HOH . 
U 5 HOH A 17 417 15 HOH HOH . 
U 5 HOH A 18 418 20 HOH HOH . 
U 5 HOH A 19 419 7 HOH HOH . 
U 5 HOH A 20 420 18 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C14 MPG . . . J 2 21.952 -9.159 -13.983 1 53.35 ? C14 MPG 309 A 1 
HETATM 2 C C15 MPG . . . J 2 22.527 -7.818 -14.361 1 51.78 ? C15 MPG 309 A 1 
HETATM 3 C C16 MPG . . . J 2 22.296 -7.425 -15.801 1 50.61 ? C16 MPG 309 A 1 
HETATM 4 C C17 MPG . . . J 2 22.893 -8.361 -16.817 1 48.47 ? C17 MPG 309 A 1 
HETATM 5 C C18 MPG . . . J 2 22.73 -7.901 -18.247 1 48.17 ? C18 MPG 309 A 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           5 
#