data_6KGH # _model_server_result.job_id vHGAVN9IFEOc45hLt1DlzA _model_server_result.datetime_utc '2024-11-02 06:26:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6kgh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 6KGH # _exptl.entry_id 6KGH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.6 _cell.angle_gamma 90 _cell.entry_id 6KGH _cell.length_a 97.71 _cell.length_b 84.22 _cell.length_c 90.5 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KGH _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 486 A CYS 603 1_555 A SG CYS 488 A CYS 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? metalc ? metalc1 A CE1 HIS 185 A HIS 302 1_555 D CO CO . A CO 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc2 A O SER 387 A SER 504 1_555 E NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.045 ? metalc ? metalc3 A OE1 GLN 392 A GLN 509 1_555 E NA NA . A NA 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.858 ? metalc ? metalc4 A NE2 HIS 528 A HIS 645 1_555 C CO CO . A CO 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc5 A NE2 HIS 535 A HIS 652 1_555 B CO CO . A CO 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc6 B CO CO . A CO 701 1_555 F O HOH . A HOH 938 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc7 B CO CO . A CO 701 1_555 F O HOH . A HOH 947 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.625 ? metalc ? metalc8 B CO CO . A CO 701 1_555 F O HOH . A HOH 940 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc9 B CO CO . A CO 701 1_555 F O HOH . A HOH 943 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc10 C CO CO . A CO 702 1_555 F O HOH . A HOH 934 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.538 ? metalc ? metalc11 D CO CO . A CO 703 1_555 F O HOH . A HOH 805 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc12 A NE2 HIS 146 A HIS 263 1_555 D CO CO . A CO 703 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc13 A NE2 HIS 535 A HIS 652 1_555 B CO CO . A CO 701 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc14 B CO CO . A CO 701 1_555 F O HOH . A HOH 948 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? metalc ? metalc15 B CO CO . A CO 701 1_555 F O HOH . A HOH 940 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.665 ? metalc ? metalc16 B CO CO . A CO 701 1_555 F O HOH . A HOH 943 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc17 D CO CO . A CO 703 1_555 F O HOH . A HOH 803 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc18 D CO CO . A CO 703 1_555 F O HOH . A HOH 942 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6KGH _atom_sites.fract_transf_matrix[1][1] 0.010234 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004052 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011884 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 701 1 CO CO . C 2 CO A 1 702 2 CO CO . D 2 CO A 1 703 4 CO CO . E 3 NA A 1 704 1 NA NA . F 4 HOH A 1 801 7 HOH HOH . F 4 HOH A 2 802 9 HOH HOH . F 4 HOH A 3 803 137 HOH HOH . F 4 HOH A 4 804 123 HOH HOH . F 4 HOH A 5 805 134 HOH HOH . F 4 HOH A 6 806 101 HOH HOH . F 4 HOH A 7 807 115 HOH HOH . F 4 HOH A 8 808 142 HOH HOH . F 4 HOH A 9 809 49 HOH HOH . F 4 HOH A 10 810 13 HOH HOH . F 4 HOH A 11 811 11 HOH HOH . F 4 HOH A 12 812 150 HOH HOH . F 4 HOH A 13 813 147 HOH HOH . F 4 HOH A 14 814 8 HOH HOH . F 4 HOH A 15 815 19 HOH HOH . F 4 HOH A 16 816 69 HOH HOH . F 4 HOH A 17 817 77 HOH HOH . F 4 HOH A 18 818 153 HOH HOH . F 4 HOH A 19 819 155 HOH HOH . F 4 HOH A 20 820 109 HOH HOH . F 4 HOH A 21 821 5 HOH HOH . F 4 HOH A 22 822 144 HOH HOH . F 4 HOH A 23 823 1 HOH HOH . F 4 HOH A 24 824 107 HOH HOH . F 4 HOH A 25 825 78 HOH HOH . F 4 HOH A 26 826 62 HOH HOH . F 4 HOH A 27 827 60 HOH HOH . F 4 HOH A 28 828 3 HOH HOH . F 4 HOH A 29 829 22 HOH HOH . F 4 HOH A 30 830 70 HOH HOH . F 4 HOH A 31 831 80 HOH HOH . F 4 HOH A 32 832 23 HOH HOH . F 4 HOH A 33 833 58 HOH HOH . F 4 HOH A 34 834 160 HOH HOH . F 4 HOH A 35 835 157 HOH HOH . F 4 HOH A 36 836 28 HOH HOH . F 4 HOH A 37 837 140 HOH HOH . F 4 HOH A 38 838 112 HOH HOH . F 4 HOH A 39 839 35 HOH HOH . F 4 HOH A 40 840 67 HOH HOH . F 4 HOH A 41 841 34 HOH HOH . F 4 HOH A 42 842 135 HOH HOH . F 4 HOH A 43 843 2 HOH HOH . F 4 HOH A 44 844 47 HOH HOH . F 4 HOH A 45 845 59 HOH HOH . F 4 HOH A 46 846 154 HOH HOH . F 4 HOH A 47 847 165 HOH HOH . F 4 HOH A 48 848 124 HOH HOH . F 4 HOH A 49 849 117 HOH HOH . F 4 HOH A 50 850 158 HOH HOH . F 4 HOH A 51 851 75 HOH HOH . F 4 HOH A 52 852 100 HOH HOH . F 4 HOH A 53 853 54 HOH HOH . F 4 HOH A 54 854 27 HOH HOH . F 4 HOH A 55 855 156 HOH HOH . F 4 HOH A 56 856 106 HOH HOH . F 4 HOH A 57 857 162 HOH HOH . F 4 HOH A 58 858 72 HOH HOH . F 4 HOH A 59 859 96 HOH HOH . F 4 HOH A 60 860 16 HOH HOH . F 4 HOH A 61 861 161 HOH HOH . F 4 HOH A 62 862 146 HOH HOH . F 4 HOH A 63 863 151 HOH HOH . F 4 HOH A 64 864 104 HOH HOH . F 4 HOH A 65 865 159 HOH HOH . F 4 HOH A 66 866 73 HOH HOH . F 4 HOH A 67 867 51 HOH HOH . F 4 HOH A 68 868 14 HOH HOH . F 4 HOH A 69 869 48 HOH HOH . F 4 HOH A 70 870 44 HOH HOH . F 4 HOH A 71 871 29 HOH HOH . F 4 HOH A 72 872 120 HOH HOH . F 4 HOH A 73 873 85 HOH HOH . F 4 HOH A 74 874 24 HOH HOH . F 4 HOH A 75 875 26 HOH HOH . F 4 HOH A 76 876 25 HOH HOH . F 4 HOH A 77 877 91 HOH HOH . F 4 HOH A 78 878 152 HOH HOH . F 4 HOH A 79 879 32 HOH HOH . F 4 HOH A 80 880 20 HOH HOH . F 4 HOH A 81 881 10 HOH HOH . F 4 HOH A 82 882 90 HOH HOH . F 4 HOH A 83 883 141 HOH HOH . F 4 HOH A 84 884 111 HOH HOH . F 4 HOH A 85 885 118 HOH HOH . F 4 HOH A 86 886 64 HOH HOH . F 4 HOH A 87 887 108 HOH HOH . F 4 HOH A 88 888 4 HOH HOH . F 4 HOH A 89 889 87 HOH HOH . F 4 HOH A 90 890 36 HOH HOH . F 4 HOH A 91 891 110 HOH HOH . F 4 HOH A 92 892 30 HOH HOH . F 4 HOH A 93 893 83 HOH HOH . F 4 HOH A 94 894 37 HOH HOH . F 4 HOH A 95 895 46 HOH HOH . F 4 HOH A 96 896 21 HOH HOH . F 4 HOH A 97 897 65 HOH HOH . F 4 HOH A 98 898 40 HOH HOH . F 4 HOH A 99 899 143 HOH HOH . F 4 HOH A 100 900 52 HOH HOH . F 4 HOH A 101 901 145 HOH HOH . F 4 HOH A 102 902 102 HOH HOH . F 4 HOH A 103 903 41 HOH HOH . F 4 HOH A 104 904 33 HOH HOH . F 4 HOH A 105 905 74 HOH HOH . F 4 HOH A 106 906 93 HOH HOH . F 4 HOH A 107 907 66 HOH HOH . F 4 HOH A 108 908 81 HOH HOH . F 4 HOH A 109 909 42 HOH HOH . F 4 HOH A 110 910 88 HOH HOH . F 4 HOH A 111 911 53 HOH HOH . F 4 HOH A 112 912 38 HOH HOH . F 4 HOH A 113 913 116 HOH HOH . F 4 HOH A 114 914 43 HOH HOH . F 4 HOH A 115 915 45 HOH HOH . F 4 HOH A 116 916 97 HOH HOH . F 4 HOH A 117 917 15 HOH HOH . F 4 HOH A 118 918 50 HOH HOH . F 4 HOH A 119 919 94 HOH HOH . F 4 HOH A 120 920 86 HOH HOH . F 4 HOH A 121 921 31 HOH HOH . F 4 HOH A 122 922 98 HOH HOH . F 4 HOH A 123 923 89 HOH HOH . F 4 HOH A 124 924 17 HOH HOH . F 4 HOH A 125 925 79 HOH HOH . F 4 HOH A 126 926 114 HOH HOH . F 4 HOH A 127 927 39 HOH HOH . F 4 HOH A 128 928 12 HOH HOH . F 4 HOH A 129 929 103 HOH HOH . F 4 HOH A 130 930 84 HOH HOH . F 4 HOH A 131 931 76 HOH HOH . F 4 HOH A 132 932 105 HOH HOH . F 4 HOH A 133 933 18 HOH HOH . F 4 HOH A 134 934 132 HOH HOH . F 4 HOH A 135 935 95 HOH HOH . F 4 HOH A 136 936 82 HOH HOH . F 4 HOH A 137 937 126 HOH HOH . F 4 HOH A 138 938 149 HOH HOH . F 4 HOH A 139 939 55 HOH HOH . F 4 HOH A 140 940 139 HOH HOH . F 4 HOH A 141 941 119 HOH HOH . F 4 HOH A 142 942 136 HOH HOH . F 4 HOH A 143 943 138 HOH HOH . F 4 HOH A 144 944 148 HOH HOH . F 4 HOH A 145 945 63 HOH HOH . F 4 HOH A 146 946 121 HOH HOH . F 4 HOH A 147 947 164 HOH HOH . F 4 HOH A 148 948 163 HOH HOH . F 4 HOH A 149 949 71 HOH HOH . F 4 HOH A 150 950 133 HOH HOH . F 4 HOH A 151 951 125 HOH HOH . F 4 HOH A 152 952 122 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 48.768 _atom_site.Cartn_y -2.732 _atom_site.Cartn_z -0.534 _atom_site.occupancy 0.85 _atom_site.B_iso_or_equiv 48 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 701 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #