data_6KGK # _model_server_result.job_id le5HYOPJXz-69QTjguc9jQ _model_server_result.datetime_utc '2024-11-28 00:05:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6kgk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":904}' # _entry.id 6KGK # _exptl.entry_id 6KGK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 276.278 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 3-[3,5-bis(fluoranyl)-2-phenylmethoxy-phenyl]propanal _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KGK _cell.length_a 119.545 _cell.length_b 178.549 _cell.length_c 234.194 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KGK _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H14 F2 O2' _chem_comp.formula_weight 276.278 _chem_comp.id DJ0 _chem_comp.mon_nstd_flag . _chem_comp.name 3-[3,5-bis(fluoranyl)-2-phenylmethoxy-phenyl]propanal _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O15 C27 DJ0 doub 83 n n C27 C28 DJ0 sing 84 n n C28 C29 DJ0 sing 85 n n O16 C36 DJ0 sing 86 n n O16 C31 DJ0 sing 87 n n C36 C37 DJ0 sing 88 n n C29 C30 DJ0 sing 89 n n C31 C30 DJ0 doub 90 n y C31 C32 DJ0 sing 91 n y C30 C35 DJ0 sing 92 n y F C32 DJ0 sing 93 n n C37 C38 DJ0 doub 94 n y C37 C42 DJ0 sing 95 n y C32 C33 DJ0 doub 96 n y C38 C39 DJ0 sing 97 n y C35 C34 DJ0 doub 98 n y C42 C41 DJ0 doub 99 n y C33 C34 DJ0 sing 100 n y C34 F1 DJ0 sing 101 n n C39 C40 DJ0 doub 102 n y C41 C40 DJ0 sing 103 n y C27 H1 DJ0 sing 104 n n C28 H2 DJ0 sing 105 n n C28 H3 DJ0 sing 106 n n C29 H4 DJ0 sing 107 n n C29 H5 DJ0 sing 108 n n C33 H6 DJ0 sing 109 n n C35 H7 DJ0 sing 110 n n C36 H8 DJ0 sing 111 n n C36 H9 DJ0 sing 112 n n C38 H10 DJ0 sing 113 n n C39 H11 DJ0 sing 114 n n C40 H12 DJ0 sing 115 n n C41 H13 DJ0 sing 116 n n C42 H14 DJ0 sing 117 n n # _atom_sites.entry_id 6KGK _atom_sites.fract_transf_matrix[1][1] 0.008365 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005601 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00427 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 901 901 GOL GOL . D 3 GOL A 1 902 902 GOL GOL . E 3 GOL A 1 903 903 GOL GOL . F 4 DJ0 A 1 904 1001 DJ0 XXX . G 5 FAD A 1 905 1001 FAD XXX . H 6 HOH A 1 1101 18 HOH HOH . H 6 HOH A 2 1102 87 HOH HOH . H 6 HOH A 3 1103 6 HOH HOH . H 6 HOH A 4 1104 75 HOH HOH . H 6 HOH A 5 1105 81 HOH HOH . H 6 HOH A 6 1106 31 HOH HOH . H 6 HOH A 7 1107 4 HOH HOH . H 6 HOH A 8 1108 74 HOH HOH . H 6 HOH A 9 1109 1 HOH HOH . H 6 HOH A 10 1110 19 HOH HOH . H 6 HOH A 11 1111 40 HOH HOH . H 6 HOH A 12 1112 47 HOH HOH . H 6 HOH A 13 1113 77 HOH HOH . H 6 HOH A 14 1114 11 HOH HOH . H 6 HOH A 15 1115 8 HOH HOH . H 6 HOH A 16 1116 79 HOH HOH . H 6 HOH A 17 1117 10 HOH HOH . H 6 HOH A 18 1118 7 HOH HOH . H 6 HOH A 19 1119 59 HOH HOH . H 6 HOH A 20 1120 12 HOH HOH . H 6 HOH A 21 1121 71 HOH HOH . H 6 HOH A 22 1122 22 HOH HOH . H 6 HOH A 23 1123 50 HOH HOH . H 6 HOH A 24 1124 9 HOH HOH . H 6 HOH A 25 1125 39 HOH HOH . H 6 HOH A 26 1126 2 HOH HOH . H 6 HOH A 27 1127 13 HOH HOH . H 6 HOH A 28 1128 15 HOH HOH . H 6 HOH A 29 1129 21 HOH HOH . H 6 HOH A 30 1130 48 HOH HOH . H 6 HOH A 31 1131 5 HOH HOH . H 6 HOH A 32 1132 42 HOH HOH . H 6 HOH A 33 1133 66 HOH HOH . H 6 HOH A 34 1134 52 HOH HOH . H 6 HOH A 35 1135 53 HOH HOH . H 6 HOH A 36 1136 85 HOH HOH . H 6 HOH A 37 1137 26 HOH HOH . H 6 HOH A 38 1138 17 HOH HOH . H 6 HOH A 39 1139 37 HOH HOH . H 6 HOH A 40 1140 56 HOH HOH . H 6 HOH A 41 1141 86 HOH HOH . H 6 HOH A 42 1142 51 HOH HOH . H 6 HOH A 43 1143 78 HOH HOH . H 6 HOH A 44 1144 80 HOH HOH . H 6 HOH A 45 1145 83 HOH HOH . H 6 HOH A 46 1146 73 HOH HOH . H 6 HOH A 47 1147 28 HOH HOH . H 6 HOH A 48 1148 32 HOH HOH . H 6 HOH A 49 1149 34 HOH HOH . H 6 HOH A 50 1150 76 HOH HOH . H 6 HOH A 51 1151 3 HOH HOH . H 6 HOH A 52 1152 84 HOH HOH . H 6 HOH A 53 1153 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 DJ0 . . . F 4 7.44 -56.947 -36.553 1 70.96 ? C27 DJ0 904 A 1 HETATM 2 C C28 DJ0 . . . F 4 6.882 -55.653 -35.981 1 61.13 ? C28 DJ0 904 A 1 HETATM 3 C C29 DJ0 . . . F 4 6.569 -56.056 -34.519 1 74.55 ? C29 DJ0 904 A 1 HETATM 4 C C30 DJ0 . . . F 4 5.99 -54.963 -33.604 1 71.23 ? C30 DJ0 904 A 1 HETATM 5 C C31 DJ0 . . . F 4 6.714 -53.805 -33.282 1 83.13 ? C31 DJ0 904 A 1 HETATM 6 C C32 DJ0 . . . F 4 6.243 -52.973 -32.262 1 82.46 ? C32 DJ0 904 A 1 HETATM 7 C C33 DJ0 . . . F 4 5.067 -53.187 -31.601 1 74.83 ? C33 DJ0 904 A 1 HETATM 8 C C34 DJ0 . . . F 4 4.337 -54.268 -31.995 1 75.11 ? C34 DJ0 904 A 1 HETATM 9 C C35 DJ0 . . . F 4 4.756 -55.159 -32.969 1 73.89 ? C35 DJ0 904 A 1 HETATM 10 C C36 DJ0 . . . F 4 8.133 -52.118 -34.377 1 86.01 ? C36 DJ0 904 A 1 HETATM 11 C C37 DJ0 . . . F 4 6.949 -51.349 -34.891 1 88.72 ? C37 DJ0 904 A 1 HETATM 12 C C38 DJ0 . . . F 4 6.285 -51.744 -36.046 1 89.69 ? C38 DJ0 904 A 1 HETATM 13 C C39 DJ0 . . . F 4 5.264 -50.97 -36.575 1 86.95 ? C39 DJ0 904 A 1 HETATM 14 C C40 DJ0 . . . F 4 4.887 -49.795 -35.952 1 81.2 ? C40 DJ0 904 A 1 HETATM 15 C C41 DJ0 . . . F 4 5.531 -49.396 -34.801 1 79.27 ? C41 DJ0 904 A 1 HETATM 16 C C42 DJ0 . . . F 4 6.553 -50.168 -34.271 1 86.24 ? C42 DJ0 904 A 1 HETATM 17 F F DJ0 . . . F 4 7.006 -51.942 -31.866 1 84.92 ? F DJ0 904 A 1 HETATM 18 F F1 DJ0 . . . F 4 3.118 -54.452 -31.401 1 65.19 ? F1 DJ0 904 A 1 HETATM 19 O O15 DJ0 . . . F 4 8.55 -56.712 -37.4 1 73.95 ? O15 DJ0 904 A 1 HETATM 20 O O16 DJ0 . . . F 4 7.836 -53.491 -34.039 1 93.5 ? O16 DJ0 904 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 20 #