data_6KGK
#
_model_server_result.job_id            mHp2W8Rzxly12nnPJZuamw 
_model_server_result.datetime_utc      '2024-11-27 23:58:03' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6kgk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":905}' 
#
_entry.id    6KGK 
#
_exptl.entry_id    6KGK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          5 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6KGK 
_cell.length_a            119.545 
_cell.length_b            178.549 
_cell.length_c            234.194 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KGK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 118 n n 
PA O2A FAD sing 119 n n 
PA O5B FAD sing 120 n n 
PA O3P FAD sing 121 n n 
O2A HOA2 FAD sing 122 n n 
O5B C5B FAD sing 123 n n 
C5B C4B FAD sing 124 n n 
C5B H51A FAD sing 125 n n 
C5B H52A FAD sing 126 n n 
C4B O4B FAD sing 127 n n 
C4B C3B FAD sing 128 n n 
C4B H4B FAD sing 129 n n 
O4B C1B FAD sing 130 n n 
C3B O3B FAD sing 131 n n 
C3B C2B FAD sing 132 n n 
C3B H3B FAD sing 133 n n 
O3B HO3A FAD sing 134 n n 
C2B O2B FAD sing 135 n n 
C2B C1B FAD sing 136 n n 
C2B H2B FAD sing 137 n n 
O2B HO2A FAD sing 138 n n 
C1B N9A FAD sing 139 n n 
C1B H1B FAD sing 140 n n 
N9A C8A FAD sing 141 n y 
N9A C4A FAD sing 142 n y 
C8A N7A FAD doub 143 n y 
C8A H8A FAD sing 144 n n 
N7A C5A FAD sing 145 n y 
C5A C6A FAD sing 146 n y 
C5A C4A FAD doub 147 n y 
C6A N6A FAD sing 148 n n 
C6A N1A FAD doub 149 n y 
N6A H61A FAD sing 150 n n 
N6A H62A FAD sing 151 n n 
N1A C2A FAD sing 152 n y 
C2A N3A FAD doub 153 n y 
C2A H2A FAD sing 154 n n 
N3A C4A FAD sing 155 n y 
N1 C2 FAD sing 156 n n 
N1 C10 FAD doub 157 n n 
C2 O2 FAD doub 158 n n 
C2 N3 FAD sing 159 n n 
N3 C4 FAD sing 160 n n 
N3 HN3 FAD sing 161 n n 
C4 O4 FAD doub 162 n n 
C4 C4X FAD sing 163 n n 
C4X N5 FAD doub 164 n n 
C4X C10 FAD sing 165 n n 
N5 C5X FAD sing 166 n n 
C5X C6 FAD doub 167 n y 
C5X C9A FAD sing 168 n y 
C6 C7 FAD sing 169 n y 
C6 H6 FAD sing 170 n n 
C7 C7M FAD sing 171 n n 
C7 C8 FAD doub 172 n y 
C7M HM71 FAD sing 173 n n 
C7M HM72 FAD sing 174 n n 
C7M HM73 FAD sing 175 n n 
C8 C8M FAD sing 176 n n 
C8 C9 FAD sing 177 n y 
C8M HM81 FAD sing 178 n n 
C8M HM82 FAD sing 179 n n 
C8M HM83 FAD sing 180 n n 
C9 C9A FAD doub 181 n y 
C9 H9 FAD sing 182 n n 
C9A N10 FAD sing 183 n n 
N10 C10 FAD sing 184 n n 
N10 C1' FAD sing 185 n n 
C1' C2' FAD sing 186 n n 
C1' "H1'1" FAD sing 187 n n 
C1' "H1'2" FAD sing 188 n n 
C2' O2' FAD sing 189 n n 
C2' C3' FAD sing 190 n n 
C2' H2' FAD sing 191 n n 
O2' HO2' FAD sing 192 n n 
C3' O3' FAD sing 193 n n 
C3' C4' FAD sing 194 n n 
C3' H3' FAD sing 195 n n 
O3' HO3' FAD sing 196 n n 
C4' O4' FAD sing 197 n n 
C4' C5' FAD sing 198 n n 
C4' H4' FAD sing 199 n n 
O4' HO4' FAD sing 200 n n 
C5' O5' FAD sing 201 n n 
C5' "H5'1" FAD sing 202 n n 
C5' "H5'2" FAD sing 203 n n 
O5' P FAD sing 204 n n 
P O1P FAD doub 205 n n 
P O2P FAD sing 206 n n 
P O3P FAD sing 207 n n 
O2P HOP2 FAD sing 208 n n 
#
_atom_sites.entry_id                     6KGK 
_atom_sites.fract_transf_matrix[1][1]    0.008365 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005601 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00427 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 901 901 GOL GOL . 
D 3 GOL A 1 902 902 GOL GOL . 
E 3 GOL A 1 903 903 GOL GOL . 
F 4 DJ0 A 1 904 1001 DJ0 XXX . 
G 5 FAD A 1 905 1001 FAD XXX . 
H 6 HOH A 1 1101 18 HOH HOH . 
H 6 HOH A 2 1102 87 HOH HOH . 
H 6 HOH A 3 1103 6 HOH HOH . 
H 6 HOH A 4 1104 75 HOH HOH . 
H 6 HOH A 5 1105 81 HOH HOH . 
H 6 HOH A 6 1106 31 HOH HOH . 
H 6 HOH A 7 1107 4 HOH HOH . 
H 6 HOH A 8 1108 74 HOH HOH . 
H 6 HOH A 9 1109 1 HOH HOH . 
H 6 HOH A 10 1110 19 HOH HOH . 
H 6 HOH A 11 1111 40 HOH HOH . 
H 6 HOH A 12 1112 47 HOH HOH . 
H 6 HOH A 13 1113 77 HOH HOH . 
H 6 HOH A 14 1114 11 HOH HOH . 
H 6 HOH A 15 1115 8 HOH HOH . 
H 6 HOH A 16 1116 79 HOH HOH . 
H 6 HOH A 17 1117 10 HOH HOH . 
H 6 HOH A 18 1118 7 HOH HOH . 
H 6 HOH A 19 1119 59 HOH HOH . 
H 6 HOH A 20 1120 12 HOH HOH . 
H 6 HOH A 21 1121 71 HOH HOH . 
H 6 HOH A 22 1122 22 HOH HOH . 
H 6 HOH A 23 1123 50 HOH HOH . 
H 6 HOH A 24 1124 9 HOH HOH . 
H 6 HOH A 25 1125 39 HOH HOH . 
H 6 HOH A 26 1126 2 HOH HOH . 
H 6 HOH A 27 1127 13 HOH HOH . 
H 6 HOH A 28 1128 15 HOH HOH . 
H 6 HOH A 29 1129 21 HOH HOH . 
H 6 HOH A 30 1130 48 HOH HOH . 
H 6 HOH A 31 1131 5 HOH HOH . 
H 6 HOH A 32 1132 42 HOH HOH . 
H 6 HOH A 33 1133 66 HOH HOH . 
H 6 HOH A 34 1134 52 HOH HOH . 
H 6 HOH A 35 1135 53 HOH HOH . 
H 6 HOH A 36 1136 85 HOH HOH . 
H 6 HOH A 37 1137 26 HOH HOH . 
H 6 HOH A 38 1138 17 HOH HOH . 
H 6 HOH A 39 1139 37 HOH HOH . 
H 6 HOH A 40 1140 56 HOH HOH . 
H 6 HOH A 41 1141 86 HOH HOH . 
H 6 HOH A 42 1142 51 HOH HOH . 
H 6 HOH A 43 1143 78 HOH HOH . 
H 6 HOH A 44 1144 80 HOH HOH . 
H 6 HOH A 45 1145 83 HOH HOH . 
H 6 HOH A 46 1146 73 HOH HOH . 
H 6 HOH A 47 1147 28 HOH HOH . 
H 6 HOH A 48 1148 32 HOH HOH . 
H 6 HOH A 49 1149 34 HOH HOH . 
H 6 HOH A 50 1150 76 HOH HOH . 
H 6 HOH A 51 1151 3 HOH HOH . 
H 6 HOH A 52 1152 84 HOH HOH . 
H 6 HOH A 53 1153 82 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . G 5 6.601 -67.345 -28.737 1 56.97 ? PA FAD 905 A 1 
HETATM 2 O O1A FAD . . . G 5 7.962 -66.824 -29.004 1 53.09 ? O1A FAD 905 A 1 
HETATM 3 O O2A FAD . . . G 5 5.62 -67.73 -29.834 1 50.96 ? O2A FAD 905 A 1 
HETATM 4 O O5B FAD . . . G 5 6.811 -68.645 -27.845 1 67.88 ? O5B FAD 905 A 1 
HETATM 5 C C5B FAD . . . G 5 5.904 -69.739 -27.614 1 60.04 ? C5B FAD 905 A 1 
HETATM 6 C C4B FAD . . . G 5 6.675 -70.994 -27.907 1 55.7 ? C4B FAD 905 A 1 
HETATM 7 O O4B FAD . . . G 5 5.817 -72.132 -27.676 1 59.49 ? O4B FAD 905 A 1 
HETATM 8 C C3B FAD . . . G 5 7.191 -71.127 -29.344 1 54.31 ? C3B FAD 905 A 1 
HETATM 9 O O3B FAD . . . G 5 8.574 -71.479 -29.365 1 56.54 ? O3B FAD 905 A 1 
HETATM 10 C C2B FAD . . . G 5 6.285 -72.221 -29.936 1 53.18 ? C2B FAD 905 A 1 
HETATM 11 O O2B FAD . . . G 5 6.899 -72.998 -30.958 1 56.2 ? O2B FAD 905 A 1 
HETATM 12 C C1B FAD . . . G 5 6.055 -73.068 -28.701 1 53.95 ? C1B FAD 905 A 1 
HETATM 13 N N9A FAD . . . G 5 4.922 -73.975 -28.78 1 57.29 ? N9A FAD 905 A 1 
HETATM 14 C C8A FAD . . . G 5 3.756 -73.793 -29.479 1 57.25 ? C8A FAD 905 A 1 
HETATM 15 N N7A FAD . . . G 5 2.921 -74.797 -29.393 1 56.37 ? N7A FAD 905 A 1 
HETATM 16 C C5A FAD . . . G 5 3.578 -75.708 -28.573 1 58.88 ? C5A FAD 905 A 1 
HETATM 17 C C6A FAD . . . G 5 3.227 -76.984 -28.094 1 58.56 ? C6A FAD 905 A 1 
HETATM 18 N N6A FAD . . . G 5 2.087 -77.619 -28.417 1 46.9 ? N6A FAD 905 A 1 
HETATM 19 N N1A FAD . . . G 5 4.111 -77.617 -27.293 1 58.79 ? N1A FAD 905 A 1 
HETATM 20 C C2A FAD . . . G 5 5.272 -77.016 -27.016 1 59.61 ? C2A FAD 905 A 1 
HETATM 21 N N3A FAD . . . G 5 5.712 -75.821 -27.415 1 59.3 ? N3A FAD 905 A 1 
HETATM 22 C C4A FAD . . . G 5 4.812 -75.208 -28.192 1 55.59 ? C4A FAD 905 A 1 
HETATM 23 N N1 FAD . . . G 5 7.959 -57.724 -31.78 1 61.74 ? N1 FAD 905 A 1 
HETATM 24 C C2 FAD . . . G 5 8.957 -56.841 -31.596 1 65.3 ? C2 FAD 905 A 1 
HETATM 25 O O2 FAD . . . G 5 9.328 -56.48 -30.468 1 64.91 ? O2 FAD 905 A 1 
HETATM 26 N N3 FAD . . . G 5 9.562 -56.324 -32.703 1 64.68 ? N3 FAD 905 A 1 
HETATM 27 C C4 FAD . . . G 5 9.128 -56.512 -33.987 1 68.16 ? C4 FAD 905 A 1 
HETATM 28 O O4 FAD . . . G 5 9.888 -56.336 -34.927 1 72.09 ? O4 FAD 905 A 1 
HETATM 29 C C4X FAD . . . G 5 7.726 -57.111 -34.188 1 72.68 ? C4X FAD 905 A 1 
HETATM 30 N N5 FAD . . . G 5 7.776 -57.856 -35.442 1 68.07 ? N5 FAD 905 A 1 
HETATM 31 C C5X FAD . . . G 5 7.148 -59.094 -35.55 1 65.33 ? C5X FAD 905 A 1 
HETATM 32 C C6 FAD . . . G 5 6.997 -59.664 -36.809 1 67.53 ? C6 FAD 905 A 1 
HETATM 33 C C7 FAD . . . G 5 6.506 -60.957 -36.954 1 71.64 ? C7 FAD 905 A 1 
HETATM 34 C C7M FAD . . . G 5 6.339 -61.53 -38.335 1 61.93 ? C7M FAD 905 A 1 
HETATM 35 C C8 FAD . . . G 5 6.16 -61.701 -35.808 1 73.43 ? C8 FAD 905 A 1 
HETATM 36 C C8M FAD . . . G 5 5.704 -63.133 -35.928 1 69.67 ? C8M FAD 905 A 1 
HETATM 37 C C9 FAD . . . G 5 6.269 -61.116 -34.551 1 65.76 ? C9 FAD 905 A 1 
HETATM 38 C C9A FAD . . . G 5 6.75 -59.814 -34.41 1 66.98 ? C9A FAD 905 A 1 
HETATM 39 N N10 FAD . . . G 5 6.817 -59.188 -33.145 1 62.62 ? N10 FAD 905 A 1 
HETATM 40 C C10 FAD . . . G 5 7.488 -57.984 -32.968 1 59.25 ? C10 FAD 905 A 1 
HETATM 41 C C1' FAD . . . G 5 6.182 -59.832 -31.976 1 63.67 ? C1' FAD 905 A 1 
HETATM 42 C C2' FAD . . . G 5 7.143 -60.699 -31.164 1 55.52 ? C2' FAD 905 A 1 
HETATM 43 O O2' FAD . . . G 5 7.882 -61.526 -32.06 1 57.02 ? O2' FAD 905 A 1 
HETATM 44 C C3' FAD . . . G 5 6.41 -61.621 -30.188 1 60.39 ? C3' FAD 905 A 1 
HETATM 45 O O3' FAD . . . G 5 5.523 -60.888 -29.354 1 63.18 ? O3' FAD 905 A 1 
HETATM 46 C C4' FAD . . . G 5 7.306 -62.455 -29.27 1 59.56 ? C4' FAD 905 A 1 
HETATM 47 O O4' FAD . . . G 5 8.504 -62.856 -29.935 1 60.25 ? O4' FAD 905 A 1 
HETATM 48 C C5' FAD . . . G 5 6.546 -63.686 -28.838 1 58.73 ? C5' FAD 905 A 1 
HETATM 49 O O5' FAD . . . G 5 7.073 -64.225 -27.609 1 58.69 ? O5' FAD 905 A 1 
HETATM 50 P P FAD . . . G 5 6.336 -65.311 -26.703 1 53.76 ? P FAD 905 A 1 
HETATM 51 O O1P FAD . . . G 5 5.144 -64.81 -25.982 1 49.49 ? O1P FAD 905 A 1 
HETATM 52 O O2P FAD . . . G 5 7.509 -65.929 -25.911 1 63.62 ? O2P FAD 905 A 1 
HETATM 53 O O3P FAD . . . G 5 5.814 -66.38 -27.753 1 50.53 ? O3P FAD 905 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           467 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           53 
#