data_6KGL
#
_model_server_result.job_id            qIebU1z5ZrnluTjs4UlIAA 
_model_server_result.datetime_utc      '2024-11-24 04:46:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6kgl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":905}' 
#
_entry.id    6KGL 
#
_exptl.entry_id    6KGL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          5 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6KGL 
_cell.length_a            119.545 
_cell.length_b            178.549 
_cell.length_c            234.194 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KGL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    'I 2 2' 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             G 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 118 n n 
PA O2A FAD sing 119 n n 
PA O5B FAD sing 120 n n 
PA O3P FAD sing 121 n n 
O2A HOA2 FAD sing 122 n n 
O5B C5B FAD sing 123 n n 
C5B C4B FAD sing 124 n n 
C5B H51A FAD sing 125 n n 
C5B H52A FAD sing 126 n n 
C4B O4B FAD sing 127 n n 
C4B C3B FAD sing 128 n n 
C4B H4B FAD sing 129 n n 
O4B C1B FAD sing 130 n n 
C3B O3B FAD sing 131 n n 
C3B C2B FAD sing 132 n n 
C3B H3B FAD sing 133 n n 
O3B HO3A FAD sing 134 n n 
C2B O2B FAD sing 135 n n 
C2B C1B FAD sing 136 n n 
C2B H2B FAD sing 137 n n 
O2B HO2A FAD sing 138 n n 
C1B N9A FAD sing 139 n n 
C1B H1B FAD sing 140 n n 
N9A C8A FAD sing 141 n y 
N9A C4A FAD sing 142 n y 
C8A N7A FAD doub 143 n y 
C8A H8A FAD sing 144 n n 
N7A C5A FAD sing 145 n y 
C5A C6A FAD sing 146 n y 
C5A C4A FAD doub 147 n y 
C6A N6A FAD sing 148 n n 
C6A N1A FAD doub 149 n y 
N6A H61A FAD sing 150 n n 
N6A H62A FAD sing 151 n n 
N1A C2A FAD sing 152 n y 
C2A N3A FAD doub 153 n y 
C2A H2A FAD sing 154 n n 
N3A C4A FAD sing 155 n y 
N1 C2 FAD sing 156 n n 
N1 C10 FAD doub 157 n n 
C2 O2 FAD doub 158 n n 
C2 N3 FAD sing 159 n n 
N3 C4 FAD sing 160 n n 
N3 HN3 FAD sing 161 n n 
C4 O4 FAD doub 162 n n 
C4 C4X FAD sing 163 n n 
C4X N5 FAD doub 164 n n 
C4X C10 FAD sing 165 n n 
N5 C5X FAD sing 166 n n 
C5X C6 FAD doub 167 n y 
C5X C9A FAD sing 168 n y 
C6 C7 FAD sing 169 n y 
C6 H6 FAD sing 170 n n 
C7 C7M FAD sing 171 n n 
C7 C8 FAD doub 172 n y 
C7M HM71 FAD sing 173 n n 
C7M HM72 FAD sing 174 n n 
C7M HM73 FAD sing 175 n n 
C8 C8M FAD sing 176 n n 
C8 C9 FAD sing 177 n y 
C8M HM81 FAD sing 178 n n 
C8M HM82 FAD sing 179 n n 
C8M HM83 FAD sing 180 n n 
C9 C9A FAD doub 181 n y 
C9 H9 FAD sing 182 n n 
C9A N10 FAD sing 183 n n 
N10 C10 FAD sing 184 n n 
N10 C1' FAD sing 185 n n 
C1' C2' FAD sing 186 n n 
C1' "H1'1" FAD sing 187 n n 
C1' "H1'2" FAD sing 188 n n 
C2' O2' FAD sing 189 n n 
C2' C3' FAD sing 190 n n 
C2' H2' FAD sing 191 n n 
O2' HO2' FAD sing 192 n n 
C3' O3' FAD sing 193 n n 
C3' C4' FAD sing 194 n n 
C3' H3' FAD sing 195 n n 
O3' HO3' FAD sing 196 n n 
C4' O4' FAD sing 197 n n 
C4' C5' FAD sing 198 n n 
C4' H4' FAD sing 199 n n 
O4' HO4' FAD sing 200 n n 
C5' O5' FAD sing 201 n n 
C5' "H5'1" FAD sing 202 n n 
C5' "H5'2" FAD sing 203 n n 
O5' P FAD sing 204 n n 
P O1P FAD doub 205 n n 
P O2P FAD sing 206 n n 
P O3P FAD sing 207 n n 
O2P HOP2 FAD sing 208 n n 
#
_atom_sites.entry_id                     6KGL 
_atom_sites.fract_transf_matrix[1][1]    0.008365 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005601 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00427 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 GOL A 1 901 901 GOL GOL . 
D 3 GOL A 1 902 902 GOL GOL . 
E 3 GOL A 1 903 903 GOL GOL . 
F 4 DJ0 A 1 904 1001 DJ0 XXX . 
G 5 FAD A 1 905 1001 FAD XXX . 
H 6 HOH A 1 1001 18 HOH HOH . 
H 6 HOH A 2 1002 6 HOH HOH . 
H 6 HOH A 3 1003 87 HOH HOH . 
H 6 HOH A 4 1004 75 HOH HOH . 
H 6 HOH A 5 1005 81 HOH HOH . 
H 6 HOH A 6 1006 31 HOH HOH . 
H 6 HOH A 7 1007 4 HOH HOH . 
H 6 HOH A 8 1008 74 HOH HOH . 
H 6 HOH A 9 1009 40 HOH HOH . 
H 6 HOH A 10 1010 1 HOH HOH . 
H 6 HOH A 11 1011 11 HOH HOH . 
H 6 HOH A 12 1012 77 HOH HOH . 
H 6 HOH A 13 1013 10 HOH HOH . 
H 6 HOH A 14 1014 19 HOH HOH . 
H 6 HOH A 15 1015 8 HOH HOH . 
H 6 HOH A 16 1016 12 HOH HOH . 
H 6 HOH A 17 1017 7 HOH HOH . 
H 6 HOH A 18 1018 22 HOH HOH . 
H 6 HOH A 19 1019 59 HOH HOH . 
H 6 HOH A 20 1020 39 HOH HOH . 
H 6 HOH A 21 1021 50 HOH HOH . 
H 6 HOH A 22 1022 79 HOH HOH . 
H 6 HOH A 23 1023 15 HOH HOH . 
H 6 HOH A 24 1024 9 HOH HOH . 
H 6 HOH A 25 1025 47 HOH HOH . 
H 6 HOH A 26 1026 42 HOH HOH . 
H 6 HOH A 27 1027 71 HOH HOH . 
H 6 HOH A 28 1028 2 HOH HOH . 
H 6 HOH A 29 1029 21 HOH HOH . 
H 6 HOH A 30 1030 48 HOH HOH . 
H 6 HOH A 31 1031 13 HOH HOH . 
H 6 HOH A 32 1032 5 HOH HOH . 
H 6 HOH A 33 1033 52 HOH HOH . 
H 6 HOH A 34 1034 85 HOH HOH . 
H 6 HOH A 35 1035 66 HOH HOH . 
H 6 HOH A 36 1036 53 HOH HOH . 
H 6 HOH A 37 1037 26 HOH HOH . 
H 6 HOH A 38 1038 37 HOH HOH . 
H 6 HOH A 39 1039 51 HOH HOH . 
H 6 HOH A 40 1040 56 HOH HOH . 
H 6 HOH A 41 1041 86 HOH HOH . 
H 6 HOH A 42 1042 17 HOH HOH . 
H 6 HOH A 43 1043 78 HOH HOH . 
H 6 HOH A 44 1044 83 HOH HOH . 
H 6 HOH A 45 1045 73 HOH HOH . 
H 6 HOH A 46 1046 80 HOH HOH . 
H 6 HOH A 47 1047 32 HOH HOH . 
H 6 HOH A 48 1048 28 HOH HOH . 
H 6 HOH A 49 1049 34 HOH HOH . 
H 6 HOH A 50 1050 76 HOH HOH . 
H 6 HOH A 51 1051 3 HOH HOH . 
H 6 HOH A 52 1052 84 HOH HOH . 
H 6 HOH A 53 1053 82 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . G 5 6.631 -67.331 -28.73 1 56.17 ? PA FAD 905 A 1 
HETATM 2 O O1A FAD . . . G 5 7.977 -66.774 -29.013 1 53.18 ? O1A FAD 905 A 1 
HETATM 3 O O2A FAD . . . G 5 5.662 -67.737 -29.827 1 48.77 ? O2A FAD 905 A 1 
HETATM 4 O O5B FAD . . . G 5 6.858 -68.625 -27.787 1 67.55 ? O5B FAD 905 A 1 
HETATM 5 C C5B FAD . . . G 5 5.909 -69.703 -27.697 1 60.12 ? C5B FAD 905 A 1 
HETATM 6 C C4B FAD . . . G 5 6.689 -70.964 -27.949 1 54.46 ? C4B FAD 905 A 1 
HETATM 7 O O4B FAD . . . G 5 5.834 -72.101 -27.701 1 58.61 ? O4B FAD 905 A 1 
HETATM 8 C C3B FAD . . . G 5 7.224 -71.133 -29.375 1 53.9 ? C3B FAD 905 A 1 
HETATM 9 O O3B FAD . . . G 5 8.605 -71.496 -29.36 1 58.78 ? O3B FAD 905 A 1 
HETATM 10 C C2B FAD . . . G 5 6.315 -72.232 -29.955 1 53.49 ? C2B FAD 905 A 1 
HETATM 11 O O2B FAD . . . G 5 6.918 -73.025 -30.973 1 56.71 ? O2B FAD 905 A 1 
HETATM 12 C C1B FAD . . . G 5 6.075 -73.056 -28.706 1 53.63 ? C1B FAD 905 A 1 
HETATM 13 N N9A FAD . . . G 5 4.934 -73.956 -28.78 1 57.28 ? N9A FAD 905 A 1 
HETATM 14 C C8A FAD . . . G 5 3.769 -73.771 -29.464 1 57.01 ? C8A FAD 905 A 1 
HETATM 15 N N7A FAD . . . G 5 2.926 -74.779 -29.383 1 57.14 ? N7A FAD 905 A 1 
HETATM 16 C C5A FAD . . . G 5 3.598 -75.684 -28.579 1 57.03 ? C5A FAD 905 A 1 
HETATM 17 C C6A FAD . . . G 5 3.249 -76.975 -28.102 1 57.12 ? C6A FAD 905 A 1 
HETATM 18 N N6A FAD . . . G 5 2.116 -77.612 -28.434 1 46.35 ? N6A FAD 905 A 1 
HETATM 19 N N1A FAD . . . G 5 4.135 -77.608 -27.303 1 57.69 ? N1A FAD 905 A 1 
HETATM 20 C C2A FAD . . . G 5 5.296 -77.009 -27.027 1 57.79 ? C2A FAD 905 A 1 
HETATM 21 N N3A FAD . . . G 5 5.736 -75.813 -27.43 1 58.43 ? N3A FAD 905 A 1 
HETATM 22 C C4A FAD . . . G 5 4.834 -75.203 -28.194 1 55.22 ? C4A FAD 905 A 1 
HETATM 23 N N1 FAD . . . G 5 8.012 -57.706 -31.677 1 60.61 ? N1 FAD 905 A 1 
HETATM 24 C C2 FAD . . . G 5 9.004 -56.782 -31.467 1 63.57 ? C2 FAD 905 A 1 
HETATM 25 O O2 FAD . . . G 5 9.321 -56.411 -30.342 1 68.99 ? O2 FAD 905 A 1 
HETATM 26 N N3 FAD . . . G 5 9.624 -56.296 -32.587 1 64.58 ? N3 FAD 905 A 1 
HETATM 27 C C4 FAD . . . G 5 9.333 -56.609 -33.899 1 67.44 ? C4 FAD 905 A 1 
HETATM 28 O O4 FAD . . . G 5 10.052 -56.211 -34.811 1 72.95 ? O4 FAD 905 A 1 
HETATM 29 C C4X FAD . . . G 5 8.215 -57.47 -34.017 1 68.05 ? C4X FAD 905 A 1 
HETATM 30 N N5 FAD . . . G 5 7.743 -57.795 -35.284 1 70.76 ? N5 FAD 905 A 1 
HETATM 31 C C5X FAD . . . G 5 7.167 -59.078 -35.482 1 64.87 ? C5X FAD 905 A 1 
HETATM 32 C C6 FAD . . . G 5 7.073 -59.659 -36.741 1 65.74 ? C6 FAD 905 A 1 
HETATM 33 C C7 FAD . . . G 5 6.544 -60.933 -36.903 1 69.84 ? C7 FAD 905 A 1 
HETATM 34 C C7M FAD . . . G 5 6.395 -61.5 -38.29 1 59.54 ? C7M FAD 905 A 1 
HETATM 35 C C8 FAD . . . G 5 6.118 -61.658 -35.774 1 71.76 ? C8 FAD 905 A 1 
HETATM 36 C C8M FAD . . . G 5 5.658 -63.089 -35.902 1 68.08 ? C8M FAD 905 A 1 
HETATM 37 C C9 FAD . . . G 5 6.173 -61.061 -34.519 1 65.42 ? C9 FAD 905 A 1 
HETATM 38 C C9A FAD . . . G 5 6.684 -59.775 -34.358 1 66.71 ? C9A FAD 905 A 1 
HETATM 39 N N10 FAD . . . G 5 6.817 -59.187 -33.069 1 63.58 ? N10 FAD 905 A 1 
HETATM 40 C C10 FAD . . . G 5 7.637 -58.079 -32.939 1 61.18 ? C10 FAD 905 A 1 
HETATM 41 C C1' FAD . . . G 5 6.219 -59.844 -31.895 1 62.36 ? C1' FAD 905 A 1 
HETATM 42 C C2' FAD . . . G 5 7.173 -60.74 -31.114 1 56.03 ? C2' FAD 905 A 1 
HETATM 43 O O2' FAD . . . G 5 7.903 -61.544 -32.035 1 59.26 ? O2' FAD 905 A 1 
HETATM 44 C C3' FAD . . . G 5 6.411 -61.675 -30.17 1 60.27 ? C3' FAD 905 A 1 
HETATM 45 O O3' FAD . . . G 5 5.497 -60.941 -29.365 1 61.06 ? O3' FAD 905 A 1 
HETATM 46 C C4' FAD . . . G 5 7.295 -62.496 -29.233 1 59.55 ? C4' FAD 905 A 1 
HETATM 47 O O4' FAD . . . G 5 8.519 -62.855 -29.876 1 59.31 ? O4' FAD 905 A 1 
HETATM 48 C C5' FAD . . . G 5 6.568 -63.752 -28.813 1 58.83 ? C5' FAD 905 A 1 
HETATM 49 O O5' FAD . . . G 5 7.085 -64.237 -27.558 1 57.59 ? O5' FAD 905 A 1 
HETATM 50 P P FAD . . . G 5 6.328 -65.322 -26.684 1 56.71 ? P FAD 905 A 1 
HETATM 51 O O1P FAD . . . G 5 5.124 -64.852 -25.981 1 50 ? O1P FAD 905 A 1 
HETATM 52 O O2P FAD . . . G 5 7.495 -65.937 -25.897 1 61.61 ? O2P FAD 905 A 1 
HETATM 53 O O3P FAD . . . G 5 5.822 -66.371 -27.761 1 49.9 ? O3P FAD 905 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           233 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           53 
#