data_6KGN # _model_server_result.job_id UvwnwJ2KQdPoPEq-9SBOHA _model_server_result.datetime_utc '2024-11-24 05:51:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6kgn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":906}' # _entry.id 6KGN # _exptl.entry_id 6KGN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 276.278 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 3-[3,5-bis(fluoranyl)-2-phenylmethoxy-phenyl]propanal _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KGN _cell.length_a 120.451 _cell.length_b 178.696 _cell.length_c 235.256 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KGN _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H14 F2 O2' _chem_comp.formula_weight 276.278 _chem_comp.id DJ0 _chem_comp.mon_nstd_flag . _chem_comp.name 3-[3,5-bis(fluoranyl)-2-phenylmethoxy-phenyl]propanal _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O15 C27 DJ0 doub 83 n n C27 C28 DJ0 sing 84 n n C28 C29 DJ0 sing 85 n n O16 C36 DJ0 sing 86 n n O16 C31 DJ0 sing 87 n n C36 C37 DJ0 sing 88 n n C29 C30 DJ0 sing 89 n n C31 C30 DJ0 doub 90 n y C31 C32 DJ0 sing 91 n y C30 C35 DJ0 sing 92 n y F C32 DJ0 sing 93 n n C37 C38 DJ0 doub 94 n y C37 C42 DJ0 sing 95 n y C32 C33 DJ0 doub 96 n y C38 C39 DJ0 sing 97 n y C35 C34 DJ0 doub 98 n y C42 C41 DJ0 doub 99 n y C33 C34 DJ0 sing 100 n y C34 F1 DJ0 sing 101 n n C39 C40 DJ0 doub 102 n y C41 C40 DJ0 sing 103 n y C27 H1 DJ0 sing 104 n n C28 H2 DJ0 sing 105 n n C28 H3 DJ0 sing 106 n n C29 H4 DJ0 sing 107 n n C29 H5 DJ0 sing 108 n n C33 H6 DJ0 sing 109 n n C35 H7 DJ0 sing 110 n n C36 H8 DJ0 sing 111 n n C36 H9 DJ0 sing 112 n n C38 H10 DJ0 sing 113 n n C39 H11 DJ0 sing 114 n n C40 H12 DJ0 sing 115 n n C41 H13 DJ0 sing 116 n n C42 H14 DJ0 sing 117 n n # _atom_sites.entry_id 6KGN _atom_sites.fract_transf_matrix[1][1] 0.008302 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005596 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004251 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL A 1 901 901 GOL GOL . D 3 GOL A 1 902 902 GOL GOL . E 3 GOL A 1 903 903 GOL GOL . F 3 GOL A 1 904 904 GOL GOL . G 3 GOL A 1 905 905 GOL GOL . H 4 DJ0 A 1 906 1001 DJ0 XXX . I 5 FAD A 1 907 1001 FAD XXX . J 6 HOH A 1 1001 151 HOH HOH . J 6 HOH A 2 1002 13 HOH HOH . J 6 HOH A 3 1003 18 HOH HOH . J 6 HOH A 4 1004 1 HOH HOH . J 6 HOH A 5 1005 8 HOH HOH . J 6 HOH A 6 1006 150 HOH HOH . J 6 HOH A 7 1007 27 HOH HOH . J 6 HOH A 8 1008 137 HOH HOH . J 6 HOH A 9 1009 6 HOH HOH . J 6 HOH A 10 1010 22 HOH HOH . J 6 HOH A 11 1011 16 HOH HOH . J 6 HOH A 12 1012 162 HOH HOH . J 6 HOH A 13 1013 136 HOH HOH . J 6 HOH A 14 1014 5 HOH HOH . J 6 HOH A 15 1015 2 HOH HOH . J 6 HOH A 16 1016 30 HOH HOH . J 6 HOH A 17 1017 15 HOH HOH . J 6 HOH A 18 1018 33 HOH HOH . J 6 HOH A 19 1019 7 HOH HOH . J 6 HOH A 20 1020 148 HOH HOH . J 6 HOH A 21 1021 3 HOH HOH . J 6 HOH A 22 1022 10 HOH HOH . J 6 HOH A 23 1023 14 HOH HOH . J 6 HOH A 24 1024 26 HOH HOH . J 6 HOH A 25 1025 32 HOH HOH . J 6 HOH A 26 1026 163 HOH HOH . J 6 HOH A 27 1027 12 HOH HOH . J 6 HOH A 28 1028 35 HOH HOH . J 6 HOH A 29 1029 165 HOH HOH . J 6 HOH A 30 1030 9 HOH HOH . J 6 HOH A 31 1031 161 HOH HOH . J 6 HOH A 32 1032 17 HOH HOH . J 6 HOH A 33 1033 11 HOH HOH . J 6 HOH A 34 1034 4 HOH HOH . J 6 HOH A 35 1035 25 HOH HOH . J 6 HOH A 36 1036 28 HOH HOH . J 6 HOH A 37 1037 146 HOH HOH . J 6 HOH A 38 1038 144 HOH HOH . J 6 HOH A 39 1039 20 HOH HOH . J 6 HOH A 40 1040 138 HOH HOH . J 6 HOH A 41 1041 147 HOH HOH . J 6 HOH A 42 1042 31 HOH HOH . J 6 HOH A 43 1043 149 HOH HOH . J 6 HOH A 44 1044 24 HOH HOH . J 6 HOH A 45 1045 21 HOH HOH . J 6 HOH A 46 1046 19 HOH HOH . J 6 HOH A 47 1047 23 HOH HOH . J 6 HOH A 48 1048 29 HOH HOH . J 6 HOH A 49 1049 155 HOH HOH . J 6 HOH A 50 1050 145 HOH HOH . J 6 HOH A 51 1051 143 HOH HOH . J 6 HOH A 52 1052 139 HOH HOH . J 6 HOH A 53 1053 34 HOH HOH . J 6 HOH A 54 1054 158 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C27 DJ0 . . . H 4 7.507 -56.685 -36.305 1 79.9 ? C27 DJ0 906 A 1 HETATM 2 C C28 DJ0 . . . H 4 6.664 -55.518 -35.831 1 75.5 ? C28 DJ0 906 A 1 HETATM 3 C C29 DJ0 . . . H 4 5.666 -55.916 -34.736 1 80.96 ? C29 DJ0 906 A 1 HETATM 4 C C30 DJ0 . . . H 4 5.397 -54.923 -33.615 1 94.2 ? C30 DJ0 906 A 1 HETATM 5 C C31 DJ0 . . . H 4 6.322 -53.962 -33.188 1 107.08 ? C31 DJ0 906 A 1 HETATM 6 C C32 DJ0 . . . H 4 5.992 -53.147 -32.106 1 111.23 ? C32 DJ0 906 A 1 HETATM 7 C C33 DJ0 . . . H 4 4.797 -53.234 -31.444 1 106.58 ? C33 DJ0 906 A 1 HETATM 8 C C34 DJ0 . . . H 4 3.917 -54.178 -31.894 1 102.27 ? C34 DJ0 906 A 1 HETATM 9 C C35 DJ0 . . . H 4 4.179 -55.018 -32.946 1 99.68 ? C35 DJ0 906 A 1 HETATM 10 C C36 DJ0 . . . H 4 8.037 -52.599 -34.299 1 117.26 ? C36 DJ0 906 A 1 HETATM 11 C C37 DJ0 . . . H 4 6.959 -51.734 -34.888 1 112.09 ? C37 DJ0 906 A 1 HETATM 12 C C38 DJ0 . . . H 4 6.426 -52.012 -36.138 1 106.14 ? C38 DJ0 906 A 1 HETATM 13 C C39 DJ0 . . . H 4 5.512 -51.153 -36.724 1 109.05 ? C39 DJ0 906 A 1 HETATM 14 C C40 DJ0 . . . H 4 5.115 -50.006 -36.066 1 113.15 ? C40 DJ0 906 A 1 HETATM 15 C C41 DJ0 . . . H 4 5.623 -49.727 -34.816 1 112.68 ? C41 DJ0 906 A 1 HETATM 16 C C42 DJ0 . . . H 4 6.536 -50.586 -34.228 1 112.87 ? C42 DJ0 906 A 1 HETATM 17 F F DJ0 . . . H 4 6.904 -52.25 -31.675 1 123.66 ? F DJ0 906 A 1 HETATM 18 F F1 DJ0 . . . H 4 2.708 -54.266 -31.288 1 100.76 ? F1 DJ0 906 A 1 HETATM 19 O O15 DJ0 . . . H 4 8.007 -56.686 -37.426 1 84.74 ? O15 DJ0 906 A 1 HETATM 20 O O16 DJ0 . . . H 4 7.557 -53.875 -33.81 1 116.94 ? O16 DJ0 906 A 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 351 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 20 #