data_6KGW # _model_server_result.job_id 5pyhlph8HAB3-X6dL2pWpg _model_server_result.datetime_utc '2024-11-02 06:25:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6kgw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 6KGW # _exptl.entry_id 6KGW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 58.933 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COBALT (II) ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.31 _cell.angle_gamma 90 _cell.entry_id 6KGW _cell.length_a 97.246 _cell.length_b 84.219 _cell.length_c 90.527 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KGW _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 486 A CYS 603 1_555 A SG CYS 488 A CYS 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? covale ? covale1 A OG SER 269 A SER 386 1_555 E C15 AIX . A AIX 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.495 ? metalc ? metalc1 A NE2 HIS 146 A HIS 263 1_555 D CO CO . A CO 703 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc2 A CE1 HIS 185 A HIS 302 1_555 D CO CO . A CO 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.771 ? metalc ? metalc3 A NE2 HIS 185 A HIS 302 1_555 D CO CO . A CO 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc4 A NE2 HIS 528 A HIS 645 1_555 C CO CO . A CO 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc5 A NE2 HIS 535 A HIS 652 1_555 B CO CO . A CO 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc6 A NE2 HIS 535 A HIS 652 1_555 B CO CO . A CO 701 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc7 B CO CO . A CO 701 1_555 F O HOH . A HOH 854 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? metalc ? metalc8 B CO CO . A CO 701 1_555 F O HOH . A HOH 854 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? metalc ? metalc9 B CO CO . A CO 701 1_555 F O HOH . A HOH 862 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.883 ? metalc ? metalc10 B CO CO . A CO 701 1_555 F O HOH . A HOH 862 2_655 ? ? ? ? ? ? ? ? ? ? ? ? 1.883 ? metalc ? metalc11 C CO CO . A CO 702 1_555 F O HOH . A HOH 892 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc12 C CO CO . A CO 702 1_555 F O HOH . A HOH 894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.8 ? metalc ? metalc13 C CO CO . A CO 702 1_555 F O HOH . A HOH 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.708 ? metalc ? metalc14 D CO CO . A CO 703 1_555 F O HOH . A HOH 818 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc15 D CO CO . A CO 703 1_555 F O HOH . A HOH 830 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc16 D CO CO . A CO 703 1_555 F O HOH . A HOH 896 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? # _chem_comp.formula 'Co 2' _chem_comp.formula_weight 58.933 _chem_comp.id CO _chem_comp.mon_nstd_flag . _chem_comp.name 'COBALT (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6KGW _atom_sites.fract_transf_matrix[1][1] 0.010283 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004012 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011874 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011857 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO A 1 701 1 CO CO . C 2 CO A 1 702 2 CO CO . D 2 CO A 1 703 4 CO CO . E 3 AIX A 1 704 1 AIX AIX . F 4 HOH A 1 801 76 HOH HOH . F 4 HOH A 2 802 109 HOH HOH . F 4 HOH A 3 803 104 HOH HOH . F 4 HOH A 4 804 56 HOH HOH . F 4 HOH A 5 805 107 HOH HOH . F 4 HOH A 6 806 65 HOH HOH . F 4 HOH A 7 807 41 HOH HOH . F 4 HOH A 8 808 87 HOH HOH . F 4 HOH A 9 809 5 HOH HOH . F 4 HOH A 10 810 68 HOH HOH . F 4 HOH A 11 811 37 HOH HOH . F 4 HOH A 12 812 92 HOH HOH . F 4 HOH A 13 813 89 HOH HOH . F 4 HOH A 14 814 10 HOH HOH . F 4 HOH A 15 815 64 HOH HOH . F 4 HOH A 16 816 94 HOH HOH . F 4 HOH A 17 817 80 HOH HOH . F 4 HOH A 18 818 1 HOH HOH . F 4 HOH A 19 819 4 HOH HOH . F 4 HOH A 20 820 67 HOH HOH . F 4 HOH A 21 821 44 HOH HOH . F 4 HOH A 22 822 39 HOH HOH . F 4 HOH A 23 823 99 HOH HOH . F 4 HOH A 24 824 6 HOH HOH . F 4 HOH A 25 825 69 HOH HOH . F 4 HOH A 26 826 11 HOH HOH . F 4 HOH A 27 827 28 HOH HOH . F 4 HOH A 28 828 103 HOH HOH . F 4 HOH A 29 829 49 HOH HOH . F 4 HOH A 30 830 2 HOH HOH . F 4 HOH A 31 831 15 HOH HOH . F 4 HOH A 32 832 51 HOH HOH . F 4 HOH A 33 833 31 HOH HOH . F 4 HOH A 34 834 79 HOH HOH . F 4 HOH A 35 835 91 HOH HOH . F 4 HOH A 36 836 98 HOH HOH . F 4 HOH A 37 837 12 HOH HOH . F 4 HOH A 38 838 58 HOH HOH . F 4 HOH A 39 839 93 HOH HOH . F 4 HOH A 40 840 78 HOH HOH . F 4 HOH A 41 841 16 HOH HOH . F 4 HOH A 42 842 34 HOH HOH . F 4 HOH A 43 843 26 HOH HOH . F 4 HOH A 44 844 48 HOH HOH . F 4 HOH A 45 845 82 HOH HOH . F 4 HOH A 46 846 18 HOH HOH . F 4 HOH A 47 847 13 HOH HOH . F 4 HOH A 48 848 38 HOH HOH . F 4 HOH A 49 849 95 HOH HOH . F 4 HOH A 50 850 27 HOH HOH . F 4 HOH A 51 851 20 HOH HOH . F 4 HOH A 52 852 74 HOH HOH . F 4 HOH A 53 853 97 HOH HOH . F 4 HOH A 54 854 125 HOH HOH . F 4 HOH A 55 855 70 HOH HOH . F 4 HOH A 56 856 19 HOH HOH . F 4 HOH A 57 857 7 HOH HOH . F 4 HOH A 58 858 72 HOH HOH . F 4 HOH A 59 859 21 HOH HOH . F 4 HOH A 60 860 63 HOH HOH . F 4 HOH A 61 861 84 HOH HOH . F 4 HOH A 62 862 128 HOH HOH . F 4 HOH A 63 863 81 HOH HOH . F 4 HOH A 64 864 60 HOH HOH . F 4 HOH A 65 865 83 HOH HOH . F 4 HOH A 66 866 127 HOH HOH . F 4 HOH A 67 867 110 HOH HOH . F 4 HOH A 68 868 43 HOH HOH . F 4 HOH A 69 869 102 HOH HOH . F 4 HOH A 70 870 120 HOH HOH . F 4 HOH A 71 871 50 HOH HOH . F 4 HOH A 72 872 111 HOH HOH . F 4 HOH A 73 873 36 HOH HOH . F 4 HOH A 74 874 33 HOH HOH . F 4 HOH A 75 875 29 HOH HOH . F 4 HOH A 76 876 71 HOH HOH . F 4 HOH A 77 877 25 HOH HOH . F 4 HOH A 78 878 96 HOH HOH . F 4 HOH A 79 879 32 HOH HOH . F 4 HOH A 80 880 57 HOH HOH . F 4 HOH A 81 881 62 HOH HOH . F 4 HOH A 82 882 116 HOH HOH . F 4 HOH A 83 883 40 HOH HOH . F 4 HOH A 84 884 47 HOH HOH . F 4 HOH A 85 885 75 HOH HOH . F 4 HOH A 86 886 35 HOH HOH . F 4 HOH A 87 887 66 HOH HOH . F 4 HOH A 88 888 14 HOH HOH . F 4 HOH A 89 889 90 HOH HOH . F 4 HOH A 90 890 59 HOH HOH . F 4 HOH A 91 891 45 HOH HOH . F 4 HOH A 92 892 22 HOH HOH . F 4 HOH A 93 893 17 HOH HOH . F 4 HOH A 94 894 122 HOH HOH . F 4 HOH A 95 895 113 HOH HOH . F 4 HOH A 96 896 3 HOH HOH . F 4 HOH A 97 897 77 HOH HOH . F 4 HOH A 98 898 53 HOH HOH . F 4 HOH A 99 899 123 HOH HOH . F 4 HOH A 100 900 121 HOH HOH . F 4 HOH A 101 901 55 HOH HOH . F 4 HOH A 102 902 114 HOH HOH . F 4 HOH A 103 903 117 HOH HOH . F 4 HOH A 104 904 124 HOH HOH . F 4 HOH A 105 905 54 HOH HOH . F 4 HOH A 106 906 30 HOH HOH . F 4 HOH A 107 907 105 HOH HOH . F 4 HOH A 108 908 100 HOH HOH . F 4 HOH A 109 909 119 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CO _atom_site.label_atom_id CO _atom_site.label_comp_id CO _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 28.816 _atom_site.Cartn_y 31.771 _atom_site.Cartn_z 50.838 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 54.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CO _atom_site.auth_comp_id CO _atom_site.auth_seq_id 703 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #