data_6KHI # _model_server_result.job_id '_FsO8u46CwIcHWj4M0YFmw' _model_server_result.datetime_utc '2024-11-06 23:41:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6khi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"AA","auth_seq_id":602}' # _entry.id 6KHI # _exptl.entry_id 6KHI _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 536.873 _entity.id 24 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-CAROTENE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details eicosameric _pdbx_struct_assembly.oligomeric_count 20 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 24 AA N N ? 24 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 I SG CYS 63 I CYS 63 1_555 JA FE3 SF4 . I SF4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc2 I SG CYS 66 I CYS 66 1_555 JA FE1 SF4 . I SF4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc3 I SG CYS 69 I CYS 69 1_555 JA FE2 SF4 . I SF4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc4 I SG CYS 73 I CYS 73 1_555 IA FE3 SF4 . I SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc5 I SG CYS 103 I CYS 103 1_555 IA FE1 SF4 . I SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc6 I SG CYS 106 I CYS 106 1_555 IA FE4 SF4 . I SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? metalc ? metalc7 I SG CYS 109 I CYS 109 1_555 IA FE2 SF4 . I SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc8 I SG CYS 113 I CYS 113 1_555 JA FE4 SF4 . I SF4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc9 K SG CYS 52 K CYS 52 1_555 KA FE3 SF4 . K SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc10 K SG CYS 53 K CYS 53 1_555 KA FE2 SF4 . K SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? metalc ? metalc11 K SG CYS 117 K CYS 117 1_555 KA FE4 SF4 . K SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc12 K SG CYS 148 K CYS 148 1_555 KA FE1 SF4 . K SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc13 T SG CYS 41 1 CYS 41 1_555 MA FE1 FES . 1 FES 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc14 T SG CYS 46 1 CYS 46 1_555 MA FE1 FES . 1 FES 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc15 T SG CYS 49 1 CYS 49 1_555 MA FE2 FES . 1 FES 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc16 T SG CYS 79 1 CYS 79 1_555 MA FE2 FES . 1 FES 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? # _chem_comp.formula 'C40 H56' _chem_comp.formula_weight 536.873 _chem_comp.id BCR _chem_comp.mon_nstd_flag . _chem_comp.name BETA-CAROTENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BCR sing 70 n n C1 C6 BCR sing 71 n n C1 C31 BCR sing 72 n n C1 C32 BCR sing 73 n n C2 C3 BCR sing 74 n n C2 HC21 BCR sing 75 n n C2 HC22 BCR sing 76 n n C3 C4 BCR sing 77 n n C3 HC31 BCR sing 78 n n C3 HC32 BCR sing 79 n n C4 C5 BCR sing 80 n n C4 HC41 BCR sing 81 n n C4 HC42 BCR sing 82 n n C5 C6 BCR doub 83 n n C5 C33 BCR sing 84 n n C6 C7 BCR sing 85 n n C7 C8 BCR doub 86 e n C7 HC7 BCR sing 87 n n C8 C9 BCR sing 88 n n C8 HC8 BCR sing 89 n n C9 C10 BCR doub 90 e n C9 C34 BCR sing 91 n n C10 C11 BCR sing 92 n n C10 H10C BCR sing 93 n n C11 C12 BCR doub 94 e n C11 H11C BCR sing 95 n n C33 H331 BCR sing 96 n n C33 H332 BCR sing 97 n n C33 H333 BCR sing 98 n n C31 H311 BCR sing 99 n n C31 H312 BCR sing 100 n n C31 H313 BCR sing 101 n n C32 H321 BCR sing 102 n n C32 H322 BCR sing 103 n n C32 H323 BCR sing 104 n n C34 H341 BCR sing 105 n n C34 H342 BCR sing 106 n n C34 H343 BCR sing 107 n n C12 C13 BCR sing 108 n n C12 H12C BCR sing 109 n n C13 C14 BCR doub 110 e n C13 C35 BCR sing 111 n n C14 C15 BCR sing 112 n n C14 H14C BCR sing 113 n n C15 C16 BCR doub 114 e n C15 H15C BCR sing 115 n n C16 C17 BCR sing 116 n n C16 H16C BCR sing 117 n n C17 C18 BCR doub 118 e n C17 H17C BCR sing 119 n n C18 C19 BCR sing 120 n n C18 C36 BCR sing 121 n n C19 C20 BCR doub 122 e n C19 H19C BCR sing 123 n n C20 C21 BCR sing 124 n n C20 H20C BCR sing 125 n n C21 C22 BCR doub 126 e n C21 H21C BCR sing 127 n n C22 C23 BCR sing 128 n n C22 C37 BCR sing 129 n n C23 C24 BCR doub 130 e n C23 H23C BCR sing 131 n n C24 C25 BCR sing 132 n n C24 H24C BCR sing 133 n n C25 C26 BCR doub 134 n n C25 C30 BCR sing 135 n n C26 C27 BCR sing 136 n n C26 C38 BCR sing 137 n n C27 C28 BCR sing 138 n n C27 H271 BCR sing 139 n n C27 H272 BCR sing 140 n n C28 C29 BCR sing 141 n n C28 H281 BCR sing 142 n n C28 H282 BCR sing 143 n n C29 C30 BCR sing 144 n n C29 H291 BCR sing 145 n n C29 H292 BCR sing 146 n n C30 C39 BCR sing 147 n n C30 C40 BCR sing 148 n n C35 H351 BCR sing 149 n n C35 H352 BCR sing 150 n n C35 H353 BCR sing 151 n n C36 H361 BCR sing 152 n n C36 H362 BCR sing 153 n n C36 H363 BCR sing 154 n n C37 H371 BCR sing 155 n n C37 H372 BCR sing 156 n n C37 H373 BCR sing 157 n n C38 H381 BCR sing 158 n n C38 H382 BCR sing 159 n n C38 H383 BCR sing 160 n n C39 H391 BCR sing 161 n n C39 H392 BCR sing 162 n n C39 H393 BCR sing 163 n n C40 H401 BCR sing 164 n n C40 H402 BCR sing 165 n n C40 H403 BCR sing 166 n n # _atom_sites.entry_id 6KHI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code U 21 DGD A 1 401 401 DGD DGD . V 21 DGD A 1 402 402 DGD DGD . W 22 LHG B 1 601 502 LHG LHG . X 23 SQD C 1 201 201 SQD SQD . Y 22 LHG C 1 202 202 LHG LHG . Z 23 SQD D 1 601 501 SQD SQD . AA 24 BCR D 1 602 601 BCR BCR . BA 24 BCR D 1 603 602 BCR BCR . CA 25 LMG F 1 701 701 LMG LMG . DA 22 LHG F 1 702 702 LHG LHG . EA 25 LMG F 1 703 703 LMG LMG . FA 22 LHG F 1 704 704 LHG LHG . GA 22 LHG F 1 705 705 LHG LHG . HA 22 LHG I 1 201 404 LHG LHG . IA 26 SF4 I 1 202 201 SF4 SF4 . JA 26 SF4 I 1 203 202 SF4 SF4 . KA 26 SF4 K 1 301 301 SF4 SF4 . LA 23 SQD L 1 101 101 SQD SQD . MA 27 FES 1 1 101 101 FES FES . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BCR . . . AA 24 29.608 -32.7 -38.205 1 51.23 ? C1 BCR 602 D 1 HETATM 2 C C2 BCR . . . AA 24 28.277 -32.409 -37.515 1 51.23 ? C2 BCR 602 D 1 HETATM 3 C C3 BCR . . . AA 24 28.516 -31.565 -36.265 1 51.23 ? C3 BCR 602 D 1 HETATM 4 C C4 BCR . . . AA 24 29.123 -30.215 -36.63 1 51.23 ? C4 BCR 602 D 1 HETATM 5 C C5 BCR . . . AA 24 30.383 -30.292 -37.507 1 51.23 ? C5 BCR 602 D 1 HETATM 6 C C6 BCR . . . AA 24 30.419 -31.437 -38.549 1 51.23 ? C6 BCR 602 D 1 HETATM 7 C C7 BCR . . . AA 24 31.887 -31.851 -38.928 1 51.23 ? C7 BCR 602 D 1 HETATM 8 C C8 BCR . . . AA 24 33.01 -31.399 -38.297 1 51.23 ? C8 BCR 602 D 1 HETATM 9 C C9 BCR . . . AA 24 34.367 -31.862 -38.763 1 51.23 ? C9 BCR 602 D 1 HETATM 10 C C10 BCR . . . AA 24 35.476 -31.02 -38.081 1 51.23 ? C10 BCR 602 D 1 HETATM 11 C C11 BCR . . . AA 24 36.777 -31.841 -37.872 1 51.23 ? C11 BCR 602 D 1 HETATM 12 C C33 BCR . . . AA 24 30.44 -28.949 -38.246 1 51.23 ? C33 BCR 602 D 1 HETATM 13 C C31 BCR . . . AA 24 30.393 -33.654 -37.321 1 51.23 ? C31 BCR 602 D 1 HETATM 14 C C32 BCR . . . AA 24 29.294 -33.421 -39.518 1 51.23 ? C32 BCR 602 D 1 HETATM 15 C C34 BCR . . . AA 24 34.466 -31.701 -40.27 1 51.23 ? C34 BCR 602 D 1 HETATM 16 C C12 BCR . . . AA 24 37.977 -31.222 -37.7 1 51.23 ? C12 BCR 602 D 1 HETATM 17 C C13 BCR . . . AA 24 39.223 -32.072 -37.495 1 51.23 ? C13 BCR 602 D 1 HETATM 18 C C14 BCR . . . AA 24 40.471 -31.181 -37.598 1 51.23 ? C14 BCR 602 D 1 HETATM 19 C C15 BCR . . . AA 24 40.751 -30.409 -36.29 1 51.23 ? C15 BCR 602 D 1 HETATM 20 C C16 BCR . . . AA 24 41.834 -29.6 -36.208 1 51.23 ? C16 BCR 602 D 1 HETATM 21 C C17 BCR . . . AA 24 42.086 -28.843 -34.897 1 51.23 ? C17 BCR 602 D 1 HETATM 22 C C18 BCR . . . AA 24 43.313 -29.369 -34.137 1 51.23 ? C18 BCR 602 D 1 HETATM 23 C C19 BCR . . . AA 24 43.306 -28.827 -32.712 1 51.23 ? C19 BCR 602 D 1 HETATM 24 C C20 BCR . . . AA 24 42.668 -27.689 -32.426 1 51.23 ? C20 BCR 602 D 1 HETATM 25 C C21 BCR . . . AA 24 42.67 -27.128 -31.001 1 51.23 ? C21 BCR 602 D 1 HETATM 26 C C22 BCR . . . AA 24 43.164 -25.676 -31.03 1 51.23 ? C22 BCR 602 D 1 HETATM 27 C C23 BCR . . . AA 24 43.183 -25.058 -29.616 1 51.23 ? C23 BCR 602 D 1 HETATM 28 C C24 BCR . . . AA 24 42.401 -25.518 -28.575 1 51.23 ? C24 BCR 602 D 1 HETATM 29 C C25 BCR . . . AA 24 42.538 -24.792 -27.202 1 51.23 ? C25 BCR 602 D 1 HETATM 30 C C26 BCR . . . AA 24 41.22 -24.076 -26.783 1 51.23 ? C26 BCR 602 D 1 HETATM 31 C C27 BCR . . . AA 24 40.356 -24.863 -25.796 1 51.23 ? C27 BCR 602 D 1 HETATM 32 C C28 BCR . . . AA 24 41.183 -25.26 -24.579 1 51.23 ? C28 BCR 602 D 1 HETATM 33 C C29 BCR . . . AA 24 42.255 -26.253 -25.026 1 51.23 ? C29 BCR 602 D 1 HETATM 34 C C30 BCR . . . AA 24 43.191 -25.702 -26.11 1 51.23 ? C30 BCR 602 D 1 HETATM 35 C C35 BCR . . . AA 24 39.3 -33.149 -38.558 1 51.23 ? C35 BCR 602 D 1 HETATM 36 C C36 BCR . . . AA 24 44.565 -28.886 -34.853 1 51.23 ? C36 BCR 602 D 1 HETATM 37 C C37 BCR . . . AA 24 44.579 -25.641 -31.567 1 51.23 ? C37 BCR 602 D 1 HETATM 38 C C38 BCR . . . AA 24 40.344 -23.684 -27.984 1 51.23 ? C38 BCR 602 D 1 HETATM 39 C C39 BCR . . . AA 24 43.886 -26.955 -26.694 1 51.23 ? C39 BCR 602 D 1 HETATM 40 C C40 BCR . . . AA 24 44.281 -24.862 -25.431 1 51.23 ? C40 BCR 602 D 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 85 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 40 #