data_6KHJ
#
_model_server_result.job_id            9VhzM_wGOe3Eicw2CeV9jw 
_model_server_result.datetime_utc      '2025-07-15 08:51:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6khj 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"AA","auth_seq_id":603}' 
#
_entry.id    6KHJ 
#
_exptl.entry_id    6KHJ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          24 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6KHJ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KHJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octadecameric 
_pdbx_struct_assembly.oligomeric_count      18 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      24 
_struct_asym.id                             AA 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 I SG CYS 63 I CYS 63 1_555 JA FE3 SF4 . I SF4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc2 I SG CYS 66 I CYS 66 1_555 JA FE1 SF4 . I SF4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc3 I SG CYS 69 I CYS 69 1_555 JA FE2 SF4 . I SF4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc4 I SG CYS 73 I CYS 73 1_555 IA FE3 SF4 . I SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
metalc ? metalc5 I SG CYS 103 I CYS 103 1_555 IA FE1 SF4 . I SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.257 ? 
metalc ? metalc6 I SG CYS 106 I CYS 106 1_555 IA FE4 SF4 . I SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc7 I SG CYS 109 I CYS 109 1_555 IA FE2 SF4 . I SF4 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc8 I SG CYS 113 I CYS 113 1_555 JA FE4 SF4 . I SF4 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? 
metalc ? metalc9 K SG CYS 52 K CYS 52 1_555 KA FE3 SF4 . K SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc10 K SG CYS 53 K CYS 53 1_555 KA FE2 SF4 . K SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? 
metalc ? metalc11 K SG CYS 117 K CYS 117 1_555 KA FE4 SF4 . K SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? 
metalc ? metalc12 K SG CYS 148 K CYS 148 1_555 KA FE1 SF4 . K SF4 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 716 n n 
C1B O1B LMT sing 717 n n 
C1B O5B LMT sing 718 n n 
C1B H1B LMT sing 719 n n 
C2B C3B LMT sing 720 n n 
C2B O2B LMT sing 721 n n 
C2B H2B LMT sing 722 n n 
C3B C4B LMT sing 723 n n 
C3B O3B LMT sing 724 n n 
C3B H3B LMT sing 725 n n 
C4B C5B LMT sing 726 n n 
C4B O4' LMT sing 727 n n 
C4B H4B LMT sing 728 n n 
C5B C6B LMT sing 729 n n 
C5B O5B LMT sing 730 n n 
C5B H5B LMT sing 731 n n 
C6B O6B LMT sing 732 n n 
C6B "H6'2" LMT sing 733 n n 
C6B "H6'1" LMT sing 734 n n 
O1B C4' LMT sing 735 n n 
O2B H2O1 LMT sing 736 n n 
O3B H3O1 LMT sing 737 n n 
O4' H4O1 LMT sing 738 n n 
O6B H6B LMT sing 739 n n 
C1' C2' LMT sing 740 n n 
C1' O1' LMT sing 741 n n 
C1' O5' LMT sing 742 n n 
C1' H1' LMT sing 743 n n 
C2' C3' LMT sing 744 n n 
C2' O2' LMT sing 745 n n 
C2' H2' LMT sing 746 n n 
C3' C4' LMT sing 747 n n 
C3' O3' LMT sing 748 n n 
C3' H3' LMT sing 749 n n 
C4' C5' LMT sing 750 n n 
C4' H4' LMT sing 751 n n 
C5' C6' LMT sing 752 n n 
C5' O5' LMT sing 753 n n 
C5' H5' LMT sing 754 n n 
C6' O6' LMT sing 755 n n 
C6' H6D LMT sing 756 n n 
C6' H6E LMT sing 757 n n 
O1' C1 LMT sing 758 n n 
O2' H2O2 LMT sing 759 n n 
O3' H3O2 LMT sing 760 n n 
O6' H6' LMT sing 761 n n 
C1 C2 LMT sing 762 n n 
C1 H12 LMT sing 763 n n 
C1 H11 LMT sing 764 n n 
C2 C3 LMT sing 765 n n 
C2 H22 LMT sing 766 n n 
C2 H21 LMT sing 767 n n 
C3 C4 LMT sing 768 n n 
C3 H32 LMT sing 769 n n 
C3 H31 LMT sing 770 n n 
C4 C5 LMT sing 771 n n 
C4 H42 LMT sing 772 n n 
C4 H41 LMT sing 773 n n 
C5 C6 LMT sing 774 n n 
C5 H52 LMT sing 775 n n 
C5 H51 LMT sing 776 n n 
C6 C7 LMT sing 777 n n 
C6 H62 LMT sing 778 n n 
C6 H61 LMT sing 779 n n 
C7 C8 LMT sing 780 n n 
C7 H72 LMT sing 781 n n 
C7 H71 LMT sing 782 n n 
C8 C9 LMT sing 783 n n 
C8 H82 LMT sing 784 n n 
C8 H81 LMT sing 785 n n 
C9 C10 LMT sing 786 n n 
C9 H92 LMT sing 787 n n 
C9 H91 LMT sing 788 n n 
C10 C11 LMT sing 789 n n 
C10 H102 LMT sing 790 n n 
C10 H101 LMT sing 791 n n 
C11 C12 LMT sing 792 n n 
C11 H112 LMT sing 793 n n 
C11 H111 LMT sing 794 n n 
C12 H123 LMT sing 795 n n 
C12 H122 LMT sing 796 n n 
C12 H121 LMT sing 797 n n 
#
_atom_sites.entry_id                     6KHJ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
S 19 DGD A 1 401 401 DGD DGD . 
T 19 DGD A 1 402 402 DGD DGD . 
U 20 PL9 A 1 403 403 PL9 PL9 . 
V 21 SQD B 1 601 501 SQD SQD . 
W 21 SQD C 1 201 201 SQD SQD . 
X 22 LHG C 1 202 202 LHG LHG . 
Y 22 LHG D 1 601 502 LHG LHG . 
Z 23 BCR D 1 602 601 BCR BCR . 
AA 24 LMT D 1 603 603 LMT LMT . 
BA 23 BCR F 1 701 602 BCR BCR . 
CA 25 LMG F 1 702 701 LMG LMG . 
DA 22 LHG F 1 703 702 LHG LHG . 
EA 25 LMG F 1 704 703 LMG LMG . 
FA 22 LHG F 1 705 704 LHG LHG . 
GA 22 LHG F 1 706 705 LHG LHG . 
HA 22 LHG I 1 201 404 LHG LHG . 
IA 26 SF4 I 1 202 201 SF4 SF4 . 
JA 26 SF4 I 1 203 202 SF4 SF4 . 
KA 26 SF4 K 1 301 301 SF4 SF4 . 
LA 21 SQD N 1 201 101 SQD SQD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . AA 24 17.453 11.09 -17.914 1 62.28 ? C1B LMT 603 D 1 
HETATM 2 C C2B LMT . . . AA 24 18.121 10.603 -19.22 1 62.28 ? C2B LMT 603 D 1 
HETATM 3 C C3B LMT . . . AA 24 17.061 10.119 -20.241 1 62.28 ? C3B LMT 603 D 1 
HETATM 4 C C4B LMT . . . AA 24 15.898 9.339 -19.56 1 62.28 ? C4B LMT 603 D 1 
HETATM 5 C C5B LMT . . . AA 24 15.307 10.223 -18.436 1 62.28 ? C5B LMT 603 D 1 
HETATM 6 C C6B LMT . . . AA 24 15.058 9.378 -17.19 1 62.28 ? C6B LMT 603 D 1 
HETATM 7 O O1B LMT . . . AA 24 18.111 12.208 -17.419 1 62.28 ? O1B LMT 603 D 1 
HETATM 8 O O2B LMT . . . AA 24 18.834 11.656 -19.728 1 62.28 ? O2B LMT 603 D 1 
HETATM 9 O O3B LMT . . . AA 24 17.637 9.411 -21.266 1 62.28 ? O3B LMT 603 D 1 
HETATM 10 O O4' LMT . . . AA 24 14.909 9.036 -20.464 1 62.28 ? O4' LMT 603 D 1 
HETATM 11 O O5B LMT . . . AA 24 16.096 11.36 -18.124 1 62.28 ? O5B LMT 603 D 1 
HETATM 12 O O6B LMT . . . AA 24 14.736 10.181 -16.125 1 62.28 ? O6B LMT 603 D 1 
HETATM 13 C C1' LMT . . . AA 24 20.587 14.288 -15.85 1 62.28 ? C1' LMT 603 D 1 
HETATM 14 C C2' LMT . . . AA 24 20.863 13.057 -16.735 1 62.28 ? C2' LMT 603 D 1 
HETATM 15 C C3' LMT . . . AA 24 20.109 11.842 -16.166 1 62.28 ? C3' LMT 603 D 1 
HETATM 16 C C4' LMT . . . AA 24 18.595 12.112 -16.099 1 62.28 ? C4' LMT 603 D 1 
HETATM 17 C C5' LMT . . . AA 24 18.324 13.472 -15.368 1 62.28 ? C5' LMT 603 D 1 
HETATM 18 C C6' LMT . . . AA 24 18.094 13.389 -13.873 1 62.28 ? C6' LMT 603 D 1 
HETATM 19 O O1' LMT . . . AA 24 21.133 14.129 -14.605 1 62.28 ? O1' LMT 603 D 1 
HETATM 20 O O2' LMT . . . AA 24 20.396 13.31 -18 1 62.28 ? O2' LMT 603 D 1 
HETATM 21 O O3' LMT . . . AA 24 20.591 11.506 -14.938 1 62.28 ? O3' LMT 603 D 1 
HETATM 22 O O5' LMT . . . AA 24 19.182 14.56 -15.726 1 62.28 ? O5' LMT 603 D 1 
HETATM 23 O O6' LMT . . . AA 24 16.892 14.004 -13.642 1 62.28 ? O6' LMT 603 D 1 
HETATM 24 C C1 LMT . . . AA 24 22.066 15.118 -14.238 1 62.28 ? C1 LMT 603 D 1 
HETATM 25 C C2 LMT . . . AA 24 22.433 14.789 -12.823 1 62.28 ? C2 LMT 603 D 1 
HETATM 26 C C3 LMT . . . AA 24 23.507 13.771 -12.627 1 62.28 ? C3 LMT 603 D 1 
HETATM 27 C C4 LMT . . . AA 24 24.824 14.503 -12.612 1 62.28 ? C4 LMT 603 D 1 
HETATM 28 C C5 LMT . . . AA 24 25.918 13.619 -12.115 1 62.28 ? C5 LMT 603 D 1 
HETATM 29 C C6 LMT . . . AA 24 25.667 13.132 -10.727 1 62.28 ? C6 LMT 603 D 1 
HETATM 30 C C7 LMT . . . AA 24 26.966 12.969 -9.997 1 62.28 ? C7 LMT 603 D 1 
HETATM 31 C C8 LMT . . . AA 24 27.499 14.318 -9.662 1 62.28 ? C8 LMT 603 D 1 
HETATM 32 C C9 LMT . . . AA 24 28.936 14.517 -10.021 1 62.28 ? C9 LMT 603 D 1 
HETATM 33 C C10 LMT . . . AA 24 29.306 15.921 -9.632 1 62.28 ? C10 LMT 603 D 1 
HETATM 34 C C11 LMT . . . AA 24 30.491 16.412 -10.4 1 62.28 ? C11 LMT 603 D 1 
HETATM 35 C C12 LMT . . . AA 24 30.16 16.647 -11.834 1 62.28 ? C12 LMT 603 D 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    28 
_model_server_stats.query_time_ms           275 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           35 
#