data_6KJJ # _model_server_result.job_id J4DlW6nBiVLDTa54GVCVPA _model_server_result.datetime_utc '2025-07-19 17:37:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6kjj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6KJJ # _exptl.entry_id 6KJJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 219.258 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-acetamidoethylsulfanyl)-4-oxidanylidene-butanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KJJ _cell.length_a 117.988 _cell.length_b 117.988 _cell.length_c 52.37 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KJJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 4 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C8 H13 N O4 S' _chem_comp.formula_weight 219.258 _chem_comp.id D9L _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-acetamidoethylsulfanyl)-4-oxidanylidene-butanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C10 D9L sing 83 n n C11 C12 D9L sing 84 n n C10 C02 D9L sing 85 n n O14 C12 D9L doub 86 n n C12 O13 D9L sing 87 n n O09 C07 D9L doub 88 n n C07 C08 D9L sing 89 n n C07 N06 D9L sing 90 n n C02 S03 D9L sing 91 n n C02 O01 D9L doub 92 n n N06 C05 D9L sing 93 n n S03 C04 D9L sing 94 n n C05 C04 D9L sing 95 n n C10 H1 D9L sing 96 n n C10 H2 D9L sing 97 n n C11 H3 D9L sing 98 n n C11 H4 D9L sing 99 n n C04 H5 D9L sing 100 n n C04 H6 D9L sing 101 n n C05 H7 D9L sing 102 n n C05 H8 D9L sing 103 n n C08 H9 D9L sing 104 n n C08 H10 D9L sing 105 n n C08 H11 D9L sing 106 n n N06 H12 D9L sing 107 n n O13 H13 D9L sing 108 n n # _atom_sites.entry_id 6KJJ _atom_sites.fract_transf_matrix[1][1] 0.008475 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008475 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019095 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 D9L A 1 401 1 D9L SNS . C 3 HOH A 1 501 50 HOH HOH . C 3 HOH A 2 502 13 HOH HOH . C 3 HOH A 3 503 61 HOH HOH . C 3 HOH A 4 504 15 HOH HOH . C 3 HOH A 5 505 41 HOH HOH . C 3 HOH A 6 506 48 HOH HOH . C 3 HOH A 7 507 81 HOH HOH . C 3 HOH A 8 508 4 HOH HOH . C 3 HOH A 9 509 1 HOH HOH . C 3 HOH A 10 510 49 HOH HOH . C 3 HOH A 11 511 65 HOH HOH . C 3 HOH A 12 512 36 HOH HOH . C 3 HOH A 13 513 51 HOH HOH . C 3 HOH A 14 514 24 HOH HOH . C 3 HOH A 15 515 20 HOH HOH . C 3 HOH A 16 516 12 HOH HOH . C 3 HOH A 17 517 26 HOH HOH . C 3 HOH A 18 518 77 HOH HOH . C 3 HOH A 19 519 11 HOH HOH . C 3 HOH A 20 520 32 HOH HOH . C 3 HOH A 21 521 46 HOH HOH . C 3 HOH A 22 522 60 HOH HOH . C 3 HOH A 23 523 64 HOH HOH . C 3 HOH A 24 524 6 HOH HOH . C 3 HOH A 25 525 66 HOH HOH . C 3 HOH A 26 526 3 HOH HOH . C 3 HOH A 27 527 25 HOH HOH . C 3 HOH A 28 528 2 HOH HOH . C 3 HOH A 29 529 19 HOH HOH . C 3 HOH A 30 530 44 HOH HOH . C 3 HOH A 31 531 8 HOH HOH . C 3 HOH A 32 532 37 HOH HOH . C 3 HOH A 33 533 7 HOH HOH . C 3 HOH A 34 534 34 HOH HOH . C 3 HOH A 35 535 5 HOH HOH . C 3 HOH A 36 536 16 HOH HOH . C 3 HOH A 37 537 38 HOH HOH . C 3 HOH A 38 538 9 HOH HOH . C 3 HOH A 39 539 62 HOH HOH . C 3 HOH A 40 540 73 HOH HOH . C 3 HOH A 41 541 27 HOH HOH . C 3 HOH A 42 542 82 HOH HOH . C 3 HOH A 43 543 69 HOH HOH . C 3 HOH A 44 544 18 HOH HOH . C 3 HOH A 45 545 74 HOH HOH . C 3 HOH A 46 546 43 HOH HOH . C 3 HOH A 47 547 63 HOH HOH . C 3 HOH A 48 548 52 HOH HOH . C 3 HOH A 49 549 30 HOH HOH . C 3 HOH A 50 550 39 HOH HOH . C 3 HOH A 51 551 80 HOH HOH . C 3 HOH A 52 552 22 HOH HOH . C 3 HOH A 53 553 53 HOH HOH . C 3 HOH A 54 554 28 HOH HOH . C 3 HOH A 55 555 55 HOH HOH . C 3 HOH A 56 556 57 HOH HOH . C 3 HOH A 57 557 40 HOH HOH . C 3 HOH A 58 558 21 HOH HOH . C 3 HOH A 59 559 67 HOH HOH . C 3 HOH A 60 560 79 HOH HOH . C 3 HOH A 61 561 17 HOH HOH . C 3 HOH A 62 562 42 HOH HOH . C 3 HOH A 63 563 35 HOH HOH . C 3 HOH A 64 564 23 HOH HOH . C 3 HOH A 65 565 59 HOH HOH . C 3 HOH A 66 566 83 HOH HOH . C 3 HOH A 67 567 84 HOH HOH . C 3 HOH A 68 568 76 HOH HOH . C 3 HOH A 69 569 54 HOH HOH . C 3 HOH A 70 570 70 HOH HOH . C 3 HOH A 71 571 29 HOH HOH . C 3 HOH A 72 572 47 HOH HOH . C 3 HOH A 73 573 10 HOH HOH . C 3 HOH A 74 574 31 HOH HOH . C 3 HOH A 75 575 14 HOH HOH . C 3 HOH A 76 576 58 HOH HOH . C 3 HOH A 77 577 33 HOH HOH . C 3 HOH A 78 578 56 HOH HOH . C 3 HOH A 79 579 68 HOH HOH . C 3 HOH A 80 580 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 D9L . . . B 2 126.369 -27.762 54.456 1 78.37 ? C10 D9L 401 A 1 HETATM 2 C C11 D9L . . . B 2 126.345 -26.252 54.253 1 72.86 ? C11 D9L 401 A 1 HETATM 3 C C12 D9L . . . B 2 125.145 -25.625 54.955 1 68.08 ? C12 D9L 401 A 1 HETATM 4 C C02 D9L . . . B 2 127.247 -28.17 55.634 1 82.13 ? C02 D9L 401 A 1 HETATM 5 C C04 D9L . . . B 2 126.85 -30.796 56.944 1 77.8 ? C04 D9L 401 A 1 HETATM 6 C C05 D9L . . . B 2 125.937 -31.77 56.202 1 74.28 ? C05 D9L 401 A 1 HETATM 7 C C07 D9L . . . B 2 126.004 -34.159 55.429 1 70.7 ? C07 D9L 401 A 1 HETATM 8 C C08 D9L . . . B 2 124.49 -34.248 55.601 1 70.82 ? C08 D9L 401 A 1 HETATM 9 N N06 D9L . . . B 2 126.693 -32.919 55.738 1 72.12 ? N06 D9L 401 A 1 HETATM 10 O O01 D9L . . . B 2 127.517 -27.378 56.473 1 86.87 ? O01 D9L 401 A 1 HETATM 11 O O09 D9L . . . B 2 126.616 -35.1 55.047 1 69.49 ? O09 D9L 401 A 1 HETATM 12 O O13 D9L . . . B 2 125.325 -24.779 55.869 1 67.46 ? O13 D9L 401 A 1 HETATM 13 O O14 D9L . . . B 2 123.978 -25.956 54.621 1 65.7 ? O14 D9L 401 A 1 HETATM 14 S S03 D9L . . . B 2 127.859 -29.874 55.748 1 80.73 ? S03 D9L 401 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #