data_6KK4
#
_model_server_result.job_id            x3UTJz8boRK1lEb8PAjPQw 
_model_server_result.datetime_utc      '2024-11-08 19:11:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6kk4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    6KK4 
#
_exptl.entry_id    6KK4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6KK4 
_cell.length_a            48.828 
_cell.length_b            60.432 
_cell.length_c            83.196 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KK4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 228 n n 
C1 C2 GOL sing 229 n n 
C1 H11 GOL sing 230 n n 
C1 H12 GOL sing 231 n n 
O1 HO1 GOL sing 232 n n 
C2 O2 GOL sing 233 n n 
C2 C3 GOL sing 234 n n 
C2 H2 GOL sing 235 n n 
O2 HO2 GOL sing 236 n n 
C3 O3 GOL sing 237 n n 
C3 H31 GOL sing 238 n n 
C3 H32 GOL sing 239 n n 
O3 HO3 GOL sing 240 n n 
#
_atom_sites.entry_id                     6KK4 
_atom_sites.fract_transf_matrix[1][1]    0.02048 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016548 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01202 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 DE0 B 1 201 201 DE0 LIG . 
D 4 GOL B 1 202 301 GOL GOL . 
E 5 HOH A 1 101 132 HOH HOH . 
E 5 HOH A 2 102 44 HOH HOH . 
E 5 HOH A 3 103 118 HOH HOH . 
E 5 HOH A 4 104 142 HOH HOH . 
E 5 HOH A 5 105 123 HOH HOH . 
E 5 HOH A 6 106 100 HOH HOH . 
E 5 HOH A 7 107 43 HOH HOH . 
E 5 HOH A 8 108 143 HOH HOH . 
E 5 HOH A 9 109 16 HOH HOH . 
E 5 HOH A 10 110 87 HOH HOH . 
E 5 HOH A 11 111 20 HOH HOH . 
E 5 HOH A 12 112 72 HOH HOH . 
E 5 HOH A 13 113 110 HOH HOH . 
E 5 HOH A 14 114 15 HOH HOH . 
E 5 HOH A 15 115 21 HOH HOH . 
E 5 HOH A 16 116 66 HOH HOH . 
E 5 HOH A 17 117 49 HOH HOH . 
E 5 HOH A 18 118 130 HOH HOH . 
E 5 HOH A 19 119 24 HOH HOH . 
E 5 HOH A 20 120 48 HOH HOH . 
E 5 HOH A 21 121 30 HOH HOH . 
E 5 HOH A 22 122 90 HOH HOH . 
E 5 HOH A 23 123 14 HOH HOH . 
E 5 HOH A 24 124 122 HOH HOH . 
E 5 HOH A 25 125 47 HOH HOH . 
E 5 HOH A 26 126 86 HOH HOH . 
E 5 HOH A 27 127 124 HOH HOH . 
E 5 HOH A 28 128 133 HOH HOH . 
E 5 HOH A 29 129 95 HOH HOH . 
E 5 HOH A 30 130 137 HOH HOH . 
E 5 HOH A 31 131 102 HOH HOH . 
E 5 HOH A 32 132 136 HOH HOH . 
E 5 HOH A 33 133 92 HOH HOH . 
F 5 HOH B 1 301 114 HOH HOH . 
F 5 HOH B 2 302 68 HOH HOH . 
F 5 HOH B 3 303 46 HOH HOH . 
F 5 HOH B 4 304 28 HOH HOH . 
F 5 HOH B 5 305 67 HOH HOH . 
F 5 HOH B 6 306 39 HOH HOH . 
F 5 HOH B 7 307 58 HOH HOH . 
F 5 HOH B 8 308 60 HOH HOH . 
F 5 HOH B 9 309 51 HOH HOH . 
F 5 HOH B 10 310 74 HOH HOH . 
F 5 HOH B 11 311 63 HOH HOH . 
F 5 HOH B 12 312 42 HOH HOH . 
F 5 HOH B 13 313 35 HOH HOH . 
F 5 HOH B 14 314 81 HOH HOH . 
F 5 HOH B 15 315 23 HOH HOH . 
F 5 HOH B 16 316 55 HOH HOH . 
F 5 HOH B 17 317 64 HOH HOH . 
F 5 HOH B 18 318 25 HOH HOH . 
F 5 HOH B 19 319 1 HOH HOH . 
F 5 HOH B 20 320 128 HOH HOH . 
F 5 HOH B 21 321 84 HOH HOH . 
F 5 HOH B 22 322 7 HOH HOH . 
F 5 HOH B 23 323 29 HOH HOH . 
F 5 HOH B 24 324 10 HOH HOH . 
F 5 HOH B 25 325 3 HOH HOH . 
F 5 HOH B 26 326 9 HOH HOH . 
F 5 HOH B 27 327 116 HOH HOH . 
F 5 HOH B 28 328 71 HOH HOH . 
F 5 HOH B 29 329 40 HOH HOH . 
F 5 HOH B 30 330 62 HOH HOH . 
F 5 HOH B 31 331 120 HOH HOH . 
F 5 HOH B 32 332 4 HOH HOH . 
F 5 HOH B 33 333 2 HOH HOH . 
F 5 HOH B 34 334 37 HOH HOH . 
F 5 HOH B 35 335 105 HOH HOH . 
F 5 HOH B 36 336 73 HOH HOH . 
F 5 HOH B 37 337 111 HOH HOH . 
F 5 HOH B 38 338 8 HOH HOH . 
F 5 HOH B 39 339 19 HOH HOH . 
F 5 HOH B 40 340 134 HOH HOH . 
F 5 HOH B 41 341 13 HOH HOH . 
F 5 HOH B 42 342 32 HOH HOH . 
F 5 HOH B 43 343 26 HOH HOH . 
F 5 HOH B 44 344 11 HOH HOH . 
F 5 HOH B 45 345 5 HOH HOH . 
F 5 HOH B 46 346 57 HOH HOH . 
F 5 HOH B 47 347 83 HOH HOH . 
F 5 HOH B 48 348 82 HOH HOH . 
F 5 HOH B 49 349 56 HOH HOH . 
F 5 HOH B 50 350 77 HOH HOH . 
F 5 HOH B 51 351 6 HOH HOH . 
F 5 HOH B 52 352 34 HOH HOH . 
F 5 HOH B 53 353 107 HOH HOH . 
F 5 HOH B 54 354 18 HOH HOH . 
F 5 HOH B 55 355 45 HOH HOH . 
F 5 HOH B 56 356 79 HOH HOH . 
F 5 HOH B 57 357 97 HOH HOH . 
F 5 HOH B 58 358 121 HOH HOH . 
F 5 HOH B 59 359 41 HOH HOH . 
F 5 HOH B 60 360 99 HOH HOH . 
F 5 HOH B 61 361 36 HOH HOH . 
F 5 HOH B 62 362 131 HOH HOH . 
F 5 HOH B 63 363 115 HOH HOH . 
F 5 HOH B 64 364 106 HOH HOH . 
F 5 HOH B 65 365 17 HOH HOH . 
F 5 HOH B 66 366 112 HOH HOH . 
F 5 HOH B 67 367 129 HOH HOH . 
F 5 HOH B 68 368 91 HOH HOH . 
F 5 HOH B 69 369 80 HOH HOH . 
F 5 HOH B 70 370 76 HOH HOH . 
F 5 HOH B 71 371 140 HOH HOH . 
F 5 HOH B 72 372 94 HOH HOH . 
F 5 HOH B 73 373 22 HOH HOH . 
F 5 HOH B 74 374 96 HOH HOH . 
F 5 HOH B 75 375 54 HOH HOH . 
F 5 HOH B 76 376 38 HOH HOH . 
F 5 HOH B 77 377 141 HOH HOH . 
F 5 HOH B 78 378 70 HOH HOH . 
F 5 HOH B 79 379 33 HOH HOH . 
F 5 HOH B 80 380 138 HOH HOH . 
F 5 HOH B 81 381 113 HOH HOH . 
F 5 HOH B 82 382 75 HOH HOH . 
F 5 HOH B 83 383 59 HOH HOH . 
F 5 HOH B 84 384 52 HOH HOH . 
F 5 HOH B 85 385 109 HOH HOH . 
F 5 HOH B 86 386 12 HOH HOH . 
F 5 HOH B 87 387 31 HOH HOH . 
F 5 HOH B 88 388 93 HOH HOH . 
F 5 HOH B 89 389 85 HOH HOH . 
F 5 HOH B 90 390 98 HOH HOH . 
F 5 HOH B 91 391 104 HOH HOH . 
F 5 HOH B 92 392 126 HOH HOH . 
F 5 HOH B 93 393 50 HOH HOH . 
F 5 HOH B 94 394 101 HOH HOH . 
F 5 HOH B 95 395 78 HOH HOH . 
F 5 HOH B 96 396 103 HOH HOH . 
F 5 HOH B 97 397 53 HOH HOH . 
F 5 HOH B 98 398 61 HOH HOH . 
F 5 HOH B 99 399 88 HOH HOH . 
F 5 HOH B 100 400 117 HOH HOH . 
F 5 HOH B 101 401 65 HOH HOH . 
F 5 HOH B 102 402 135 HOH HOH . 
F 5 HOH B 103 403 125 HOH HOH . 
F 5 HOH B 104 404 119 HOH HOH . 
F 5 HOH B 105 405 127 HOH HOH . 
F 5 HOH B 106 406 27 HOH HOH . 
F 5 HOH B 107 407 89 HOH HOH . 
F 5 HOH B 108 408 69 HOH HOH . 
F 5 HOH B 109 409 108 HOH HOH . 
F 5 HOH B 110 410 139 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 -8.112 -7.145 15.306 1 42.43 ? C1 GOL 202 B 1 
HETATM 2 O O1 GOL . . . D 4 -8.304 -5.629 15.332 1 29.26 ? O1 GOL 202 B 1 
HETATM 3 C C2 GOL . . . D 4 -9.411 -8.116 15.317 1 44.07 ? C2 GOL 202 B 1 
HETATM 4 O O2 GOL . . . D 4 -9.41 -9.195 16.323 1 24.78 ? O2 GOL 202 B 1 
HETATM 5 C C3 GOL . . . D 4 -10.493 -7.143 15.652 1 48.13 ? C3 GOL 202 B 1 
HETATM 6 O O3 GOL . . . D 4 -9.95 -6.633 16.834 1 43.98 ? O3 GOL 202 B 1 
HETATM 7 H H11 GOL . . . D 4 -7.577 -7.421 16.066 1 50.92 ? H11 GOL 202 B 1 
HETATM 8 H H12 GOL . . . D 4 -7.607 -7.399 14.518 1 50.92 ? H12 GOL 202 B 1 
HETATM 9 H HO1 GOL . . . D 4 -7.54 -5.282 15.382 1 35.11 ? HO1 GOL 202 B 1 
HETATM 10 H H2 GOL . . . D 4 -9.476 -8.576 14.466 1 52.88 ? H2 GOL 202 B 1 
HETATM 11 H HO2 GOL . . . D 4 -10.17 -9.58 16.287 1 29.73 ? HO2 GOL 202 B 1 
HETATM 12 H H31 GOL . . . D 4 -11.351 -7.586 15.75 1 57.75 ? H31 GOL 202 B 1 
HETATM 13 H H32 GOL . . . D 4 -10.619 -6.494 14.943 1 57.75 ? H32 GOL 202 B 1 
HETATM 14 H HO3 GOL . . . D 4 -10.599 -6.453 17.359 1 52.77 ? HO3 GOL 202 B 1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           291 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#