data_6KNT # _model_server_result.job_id 7DmnWUUx7ZnaJQ5RrcHeoQ _model_server_result.datetime_utc '2024-11-09 02:47:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6knt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":302}' # _entry.id 6KNT # _exptl.entry_id 6KNT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KNT _cell.length_a 202.754 _cell.length_b 202.754 _cell.length_c 202.754 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KNT _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 65 A HIS 59 1_555 F ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc2 A ND1 HIS 67 A HIS 61 1_555 F ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc3 A OD2 ASP 69 A ASP 63 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.659 ? metalc ? metalc4 A NE2 HIS 70 A HIS 64 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc5 A NE2 HIS 140 A HIS 134 1_555 F ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? metalc ? metalc6 A OD2 ASP 161 A ASP 155 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? metalc ? metalc7 A OD2 ASP 161 A ASP 155 1_555 F ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc8 A NE2 HIS 217 A HIS 211 1_555 E ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc9 B NE2 HIS 65 B HIS 59 1_555 H ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc10 B ND1 HIS 67 B HIS 61 1_555 H ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.292 ? metalc ? metalc11 B OD2 ASP 69 B ASP 63 1_555 G ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.544 ? metalc ? metalc12 B NE2 HIS 70 B HIS 64 1_555 G ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc13 B NE2 HIS 140 B HIS 134 1_555 H ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc14 B OD2 ASP 161 B ASP 155 1_555 G ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc15 B OD2 ASP 161 B ASP 155 1_555 H ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? metalc ? metalc16 B NE2 HIS 217 B HIS 211 1_555 G ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc17 C NE2 HIS 65 C HIS 59 1_555 J ZN ZN . C ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc18 C ND1 HIS 67 C HIS 61 1_555 J ZN ZN . C ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc19 C OD2 ASP 69 C ASP 63 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc20 C NE2 HIS 70 C HIS 64 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc21 C NE2 HIS 140 C HIS 134 1_555 J ZN ZN . C ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc22 C OD2 ASP 161 C ASP 155 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.988 ? metalc ? metalc23 C OD2 ASP 161 C ASP 155 1_555 J ZN ZN . C ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc24 C NE2 HIS 217 C HIS 211 1_555 I ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc25 D NE2 HIS 65 D HIS 59 1_555 L ZN ZN . D ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc26 D ND1 HIS 67 D HIS 61 1_555 L ZN ZN . D ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc27 D OD2 ASP 69 D ASP 63 1_555 K ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc28 D NE2 HIS 70 D HIS 64 1_555 K ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc29 D NE2 HIS 140 D HIS 134 1_555 L ZN ZN . D ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc30 D OD2 ASP 161 D ASP 155 1_555 K ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.94 ? metalc ? metalc31 D OD2 ASP 161 D ASP 155 1_555 L ZN ZN . D ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? metalc ? metalc32 D NE2 HIS 217 D HIS 211 1_555 K ZN ZN . D ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6KNT _atom_sites.fract_transf_matrix[1][1] 0.004932 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.004932 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004932 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 301 301 ZN ZN . F 2 ZN A 1 302 302 ZN ZN . G 2 ZN B 1 301 311 ZN ZN . H 2 ZN B 1 302 312 ZN ZN . I 2 ZN C 1 301 321 ZN ZN . J 2 ZN C 1 302 322 ZN ZN . K 2 ZN D 1 301 331 ZN ZN . L 2 ZN D 1 302 332 ZN ZN . M 3 HOH A 1 401 168 HOH HOH . M 3 HOH A 2 402 104 HOH HOH . M 3 HOH A 3 403 114 HOH HOH . M 3 HOH A 4 404 49 HOH HOH . M 3 HOH A 5 405 78 HOH HOH . M 3 HOH A 6 406 11 HOH HOH . M 3 HOH A 7 407 128 HOH HOH . M 3 HOH A 8 408 162 HOH HOH . M 3 HOH A 9 409 59 HOH HOH . M 3 HOH A 10 410 140 HOH HOH . M 3 HOH A 11 411 154 HOH HOH . M 3 HOH A 12 412 47 HOH HOH . M 3 HOH A 13 413 141 HOH HOH . M 3 HOH A 14 414 38 HOH HOH . M 3 HOH A 15 415 172 HOH HOH . M 3 HOH A 16 416 50 HOH HOH . M 3 HOH A 17 417 137 HOH HOH . M 3 HOH A 18 418 79 HOH HOH . M 3 HOH A 19 419 126 HOH HOH . M 3 HOH A 20 420 107 HOH HOH . M 3 HOH A 21 421 155 HOH HOH . M 3 HOH A 22 422 55 HOH HOH . M 3 HOH A 23 423 106 HOH HOH . M 3 HOH A 24 424 46 HOH HOH . M 3 HOH A 25 425 68 HOH HOH . M 3 HOH A 26 426 160 HOH HOH . M 3 HOH A 27 427 177 HOH HOH . M 3 HOH A 28 428 170 HOH HOH . M 3 HOH A 29 429 74 HOH HOH . M 3 HOH A 30 430 159 HOH HOH . M 3 HOH A 31 431 178 HOH HOH . M 3 HOH A 32 432 166 HOH HOH . M 3 HOH A 33 433 28 HOH HOH . M 3 HOH A 34 434 181 HOH HOH . M 3 HOH A 35 435 72 HOH HOH . M 3 HOH A 36 436 39 HOH HOH . M 3 HOH A 37 437 37 HOH HOH . M 3 HOH A 38 438 100 HOH HOH . M 3 HOH A 39 439 57 HOH HOH . M 3 HOH A 40 440 116 HOH HOH . M 3 HOH A 41 441 152 HOH HOH . M 3 HOH A 42 442 164 HOH HOH . M 3 HOH A 43 443 161 HOH HOH . M 3 HOH A 44 444 2 HOH HOH . M 3 HOH A 45 445 112 HOH HOH . M 3 HOH A 46 446 23 HOH HOH . M 3 HOH A 47 447 157 HOH HOH . M 3 HOH A 48 448 69 HOH HOH . M 3 HOH A 49 449 83 HOH HOH . M 3 HOH A 50 450 17 HOH HOH . M 3 HOH A 51 451 108 HOH HOH . M 3 HOH A 52 452 14 HOH HOH . M 3 HOH A 53 453 91 HOH HOH . M 3 HOH A 54 454 24 HOH HOH . M 3 HOH A 55 455 40 HOH HOH . M 3 HOH A 56 456 66 HOH HOH . M 3 HOH A 57 457 80 HOH HOH . M 3 HOH A 58 458 56 HOH HOH . M 3 HOH A 59 459 36 HOH HOH . M 3 HOH A 60 460 117 HOH HOH . M 3 HOH A 61 461 42 HOH HOH . M 3 HOH A 62 462 93 HOH HOH . M 3 HOH A 63 463 113 HOH HOH . M 3 HOH A 64 464 1 HOH HOH . M 3 HOH A 65 465 54 HOH HOH . M 3 HOH A 66 466 9 HOH HOH . M 3 HOH A 67 467 111 HOH HOH . M 3 HOH A 68 468 71 HOH HOH . M 3 HOH A 69 469 147 HOH HOH . M 3 HOH A 70 470 176 HOH HOH . N 3 HOH B 1 401 98 HOH HOH . N 3 HOH B 2 402 27 HOH HOH . N 3 HOH B 3 403 110 HOH HOH . N 3 HOH B 4 404 16 HOH HOH . N 3 HOH B 5 405 19 HOH HOH . N 3 HOH B 6 406 48 HOH HOH . N 3 HOH B 7 407 167 HOH HOH . N 3 HOH B 8 408 26 HOH HOH . N 3 HOH B 9 409 41 HOH HOH . N 3 HOH B 10 410 10 HOH HOH . N 3 HOH B 11 411 105 HOH HOH . N 3 HOH B 12 412 12 HOH HOH . N 3 HOH B 13 413 101 HOH HOH . N 3 HOH B 14 414 85 HOH HOH . N 3 HOH B 15 415 123 HOH HOH . N 3 HOH B 16 416 119 HOH HOH . N 3 HOH B 17 417 81 HOH HOH . N 3 HOH B 18 418 75 HOH HOH . N 3 HOH B 19 419 153 HOH HOH . N 3 HOH B 20 420 43 HOH HOH . N 3 HOH B 21 421 158 HOH HOH . N 3 HOH B 22 422 35 HOH HOH . N 3 HOH B 23 423 51 HOH HOH . N 3 HOH B 24 424 7 HOH HOH . N 3 HOH B 25 425 179 HOH HOH . N 3 HOH B 26 426 70 HOH HOH . N 3 HOH B 27 427 8 HOH HOH . N 3 HOH B 28 428 136 HOH HOH . N 3 HOH B 29 429 31 HOH HOH . N 3 HOH B 30 430 109 HOH HOH . N 3 HOH B 31 431 148 HOH HOH . N 3 HOH B 32 432 150 HOH HOH . O 3 HOH C 1 401 99 HOH HOH . O 3 HOH C 2 402 139 HOH HOH . O 3 HOH C 3 403 156 HOH HOH . O 3 HOH C 4 404 77 HOH HOH . O 3 HOH C 5 405 165 HOH HOH . O 3 HOH C 6 406 65 HOH HOH . O 3 HOH C 7 407 25 HOH HOH . O 3 HOH C 8 408 63 HOH HOH . O 3 HOH C 9 409 92 HOH HOH . O 3 HOH C 10 410 76 HOH HOH . O 3 HOH C 11 411 115 HOH HOH . O 3 HOH C 12 412 21 HOH HOH . O 3 HOH C 13 413 29 HOH HOH . O 3 HOH C 14 414 87 HOH HOH . O 3 HOH C 15 415 84 HOH HOH . O 3 HOH C 16 416 20 HOH HOH . O 3 HOH C 17 417 5 HOH HOH . O 3 HOH C 18 418 131 HOH HOH . P 3 HOH D 1 401 120 HOH HOH . P 3 HOH D 2 402 124 HOH HOH . P 3 HOH D 3 403 103 HOH HOH . P 3 HOH D 4 404 86 HOH HOH . P 3 HOH D 5 405 52 HOH HOH . P 3 HOH D 6 406 169 HOH HOH . P 3 HOH D 7 407 44 HOH HOH . P 3 HOH D 8 408 171 HOH HOH . P 3 HOH D 9 409 102 HOH HOH . P 3 HOH D 10 410 122 HOH HOH . P 3 HOH D 11 411 163 HOH HOH . P 3 HOH D 12 412 32 HOH HOH . P 3 HOH D 13 413 45 HOH HOH . P 3 HOH D 14 414 96 HOH HOH . P 3 HOH D 15 415 13 HOH HOH . P 3 HOH D 16 416 121 HOH HOH . P 3 HOH D 17 417 134 HOH HOH . P 3 HOH D 18 418 182 HOH HOH . P 3 HOH D 19 419 133 HOH HOH . P 3 HOH D 20 420 15 HOH HOH . P 3 HOH D 21 421 6 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x -20.506 _atom_site.Cartn_y -37.483 _atom_site.Cartn_z 5.125 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 31.76 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #