data_6KO0 # _model_server_result.job_id '_Yvfy3Z9PQT6Dc0JyoBjbA' _model_server_result.datetime_utc '2024-11-12 21:25:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ko0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":803}' # _entry.id 6KO0 # _exptl.entry_id 6KO0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KO0 _cell.length_a 49.213 _cell.length_b 81.535 _cell.length_c 161.375 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KO0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 82 A HIS 529 1_555 D ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.601 ? metalc ? metalc2 A OD2 ASP 117 A ASP 564 1_555 D ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc3 A OD1 ASP 117 A ASP 564 1_555 E MG MG . A MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc4 A OD1 ASP 227 A ASP 674 1_555 D ZN ZN . A ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc5 E MG MG . A MG 803 1_555 I O HOH . A HOH 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.96 ? metalc ? metalc6 E MG MG . A MG 803 1_555 I O HOH . A HOH 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.748 ? metalc ? metalc7 E MG MG . A MG 803 1_555 I O HOH . A HOH 919 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc8 B NE2 HIS 116 B HIS 563 1_555 G ZN ZN . B ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc9 B OD2 ASP 117 B ASP 564 1_555 G ZN ZN . B ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc10 B OD1 ASP 117 B ASP 564 1_555 H MG MG . B MG 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc11 B OD1 ASP 227 B ASP 674 1_555 G ZN ZN . B ZN 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.994 ? metalc ? metalc12 G ZN ZN . B ZN 802 1_555 J O HOH . B HOH 934 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc13 H MG MG . B MG 803 1_555 J O HOH . B HOH 926 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc14 H MG MG . B MG 803 1_555 J O HOH . B HOH 934 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc15 H MG MG . B MG 803 1_555 J O HOH . B HOH 946 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.11 ? metalc ? metalc16 H MG MG . B MG 803 1_555 J O HOH . B HOH 958 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6KO0 _atom_sites.fract_transf_matrix[1][1] 0.02032 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012265 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006197 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 DKU A 1 801 2 DKU LYF . D 3 ZN A 1 802 1 ZN ZN . E 4 MG A 1 803 1 MG MG . F 2 DKU B 1 801 1 DKU LYF . G 3 ZN B 1 802 2 ZN ZN . H 4 MG B 1 803 2 MG MG . I 5 HOH A 1 901 222 HOH HOH . I 5 HOH A 2 902 41 HOH HOH . I 5 HOH A 3 903 227 HOH HOH . I 5 HOH A 4 904 105 HOH HOH . I 5 HOH A 5 905 2 HOH HOH . I 5 HOH A 6 906 160 HOH HOH . I 5 HOH A 7 907 66 HOH HOH . I 5 HOH A 8 908 3 HOH HOH . I 5 HOH A 9 909 217 HOH HOH . I 5 HOH A 10 910 10 HOH HOH . I 5 HOH A 11 911 196 HOH HOH . I 5 HOH A 12 912 20 HOH HOH . I 5 HOH A 13 913 221 HOH HOH . I 5 HOH A 14 914 86 HOH HOH . I 5 HOH A 15 915 59 HOH HOH . I 5 HOH A 16 916 17 HOH HOH . I 5 HOH A 17 917 89 HOH HOH . I 5 HOH A 18 918 167 HOH HOH . I 5 HOH A 19 919 207 HOH HOH . I 5 HOH A 20 920 201 HOH HOH . I 5 HOH A 21 921 45 HOH HOH . I 5 HOH A 22 922 13 HOH HOH . I 5 HOH A 23 923 141 HOH HOH . I 5 HOH A 24 924 60 HOH HOH . I 5 HOH A 25 925 204 HOH HOH . I 5 HOH A 26 926 102 HOH HOH . I 5 HOH A 27 927 16 HOH HOH . I 5 HOH A 28 928 99 HOH HOH . I 5 HOH A 29 929 8 HOH HOH . I 5 HOH A 30 930 47 HOH HOH . I 5 HOH A 31 931 178 HOH HOH . I 5 HOH A 32 932 137 HOH HOH . I 5 HOH A 33 933 194 HOH HOH . I 5 HOH A 34 934 1 HOH HOH . I 5 HOH A 35 935 52 HOH HOH . I 5 HOH A 36 936 28 HOH HOH . I 5 HOH A 37 937 62 HOH HOH . I 5 HOH A 38 938 51 HOH HOH . I 5 HOH A 39 939 24 HOH HOH . I 5 HOH A 40 940 162 HOH HOH . I 5 HOH A 41 941 166 HOH HOH . I 5 HOH A 42 942 188 HOH HOH . I 5 HOH A 43 943 23 HOH HOH . I 5 HOH A 44 944 131 HOH HOH . I 5 HOH A 45 945 46 HOH HOH . I 5 HOH A 46 946 25 HOH HOH . I 5 HOH A 47 947 174 HOH HOH . I 5 HOH A 48 948 117 HOH HOH . I 5 HOH A 49 949 92 HOH HOH . I 5 HOH A 50 950 80 HOH HOH . I 5 HOH A 51 951 125 HOH HOH . I 5 HOH A 52 952 57 HOH HOH . I 5 HOH A 53 953 200 HOH HOH . I 5 HOH A 54 954 199 HOH HOH . I 5 HOH A 55 955 104 HOH HOH . I 5 HOH A 56 956 82 HOH HOH . I 5 HOH A 57 957 97 HOH HOH . I 5 HOH A 58 958 142 HOH HOH . I 5 HOH A 59 959 68 HOH HOH . I 5 HOH A 60 960 90 HOH HOH . I 5 HOH A 61 961 177 HOH HOH . I 5 HOH A 62 962 189 HOH HOH . I 5 HOH A 63 963 127 HOH HOH . I 5 HOH A 64 964 154 HOH HOH . I 5 HOH A 65 965 193 HOH HOH . I 5 HOH A 66 966 191 HOH HOH . I 5 HOH A 67 967 15 HOH HOH . I 5 HOH A 68 968 148 HOH HOH . I 5 HOH A 69 969 64 HOH HOH . I 5 HOH A 70 970 21 HOH HOH . I 5 HOH A 71 971 9 HOH HOH . I 5 HOH A 72 972 124 HOH HOH . I 5 HOH A 73 973 212 HOH HOH . I 5 HOH A 74 974 103 HOH HOH . I 5 HOH A 75 975 44 HOH HOH . I 5 HOH A 76 976 130 HOH HOH . I 5 HOH A 77 977 14 HOH HOH . I 5 HOH A 78 978 100 HOH HOH . I 5 HOH A 79 979 109 HOH HOH . I 5 HOH A 80 980 54 HOH HOH . I 5 HOH A 81 981 48 HOH HOH . I 5 HOH A 82 982 219 HOH HOH . I 5 HOH A 83 983 119 HOH HOH . I 5 HOH A 84 984 172 HOH HOH . I 5 HOH A 85 985 173 HOH HOH . J 5 HOH B 1 901 134 HOH HOH . J 5 HOH B 2 902 198 HOH HOH . J 5 HOH B 3 903 140 HOH HOH . J 5 HOH B 4 904 26 HOH HOH . J 5 HOH B 5 905 129 HOH HOH . J 5 HOH B 6 906 176 HOH HOH . J 5 HOH B 7 907 206 HOH HOH . J 5 HOH B 8 908 123 HOH HOH . J 5 HOH B 9 909 165 HOH HOH . J 5 HOH B 10 910 197 HOH HOH . J 5 HOH B 11 911 12 HOH HOH . J 5 HOH B 12 912 144 HOH HOH . J 5 HOH B 13 913 101 HOH HOH . J 5 HOH B 14 914 147 HOH HOH . J 5 HOH B 15 915 153 HOH HOH . J 5 HOH B 16 916 151 HOH HOH . J 5 HOH B 17 917 35 HOH HOH . J 5 HOH B 18 918 180 HOH HOH . J 5 HOH B 19 919 208 HOH HOH . J 5 HOH B 20 920 65 HOH HOH . J 5 HOH B 21 921 91 HOH HOH . J 5 HOH B 22 922 139 HOH HOH . J 5 HOH B 23 923 49 HOH HOH . J 5 HOH B 24 924 110 HOH HOH . J 5 HOH B 25 925 58 HOH HOH . J 5 HOH B 26 926 4 HOH HOH . J 5 HOH B 27 927 111 HOH HOH . J 5 HOH B 28 928 76 HOH HOH . J 5 HOH B 29 929 211 HOH HOH . J 5 HOH B 30 930 218 HOH HOH . J 5 HOH B 31 931 157 HOH HOH . J 5 HOH B 32 932 214 HOH HOH . J 5 HOH B 33 933 149 HOH HOH . J 5 HOH B 34 934 209 HOH HOH . J 5 HOH B 35 935 146 HOH HOH . J 5 HOH B 36 936 195 HOH HOH . J 5 HOH B 37 937 75 HOH HOH . J 5 HOH B 38 938 159 HOH HOH . J 5 HOH B 39 939 72 HOH HOH . J 5 HOH B 40 940 181 HOH HOH . J 5 HOH B 41 941 116 HOH HOH . J 5 HOH B 42 942 84 HOH HOH . J 5 HOH B 43 943 7 HOH HOH . J 5 HOH B 44 944 96 HOH HOH . J 5 HOH B 45 945 108 HOH HOH . J 5 HOH B 46 946 6 HOH HOH . J 5 HOH B 47 947 40 HOH HOH . J 5 HOH B 48 948 98 HOH HOH . J 5 HOH B 49 949 81 HOH HOH . J 5 HOH B 50 950 43 HOH HOH . J 5 HOH B 51 951 77 HOH HOH . J 5 HOH B 52 952 213 HOH HOH . J 5 HOH B 53 953 33 HOH HOH . J 5 HOH B 54 954 36 HOH HOH . J 5 HOH B 55 955 69 HOH HOH . J 5 HOH B 56 956 93 HOH HOH . J 5 HOH B 57 957 87 HOH HOH . J 5 HOH B 58 958 5 HOH HOH . J 5 HOH B 59 959 11 HOH HOH . J 5 HOH B 60 960 114 HOH HOH . J 5 HOH B 61 961 186 HOH HOH . J 5 HOH B 62 962 38 HOH HOH . J 5 HOH B 63 963 67 HOH HOH . J 5 HOH B 64 964 136 HOH HOH . J 5 HOH B 65 965 202 HOH HOH . J 5 HOH B 66 966 121 HOH HOH . J 5 HOH B 67 967 168 HOH HOH . J 5 HOH B 68 968 138 HOH HOH . J 5 HOH B 69 969 135 HOH HOH . J 5 HOH B 70 970 113 HOH HOH . J 5 HOH B 71 971 185 HOH HOH . J 5 HOH B 72 972 78 HOH HOH . J 5 HOH B 73 973 63 HOH HOH . J 5 HOH B 74 974 22 HOH HOH . J 5 HOH B 75 975 169 HOH HOH . J 5 HOH B 76 976 161 HOH HOH . J 5 HOH B 77 977 19 HOH HOH . J 5 HOH B 78 978 42 HOH HOH . J 5 HOH B 79 979 118 HOH HOH . J 5 HOH B 80 980 37 HOH HOH . J 5 HOH B 81 981 182 HOH HOH . J 5 HOH B 82 982 128 HOH HOH . J 5 HOH B 83 983 112 HOH HOH . J 5 HOH B 84 984 32 HOH HOH . J 5 HOH B 85 985 85 HOH HOH . J 5 HOH B 86 986 183 HOH HOH . J 5 HOH B 87 987 94 HOH HOH . J 5 HOH B 88 988 163 HOH HOH . J 5 HOH B 89 989 27 HOH HOH . J 5 HOH B 90 990 132 HOH HOH . J 5 HOH B 91 991 70 HOH HOH . J 5 HOH B 92 992 31 HOH HOH . J 5 HOH B 93 993 164 HOH HOH . J 5 HOH B 94 994 215 HOH HOH . J 5 HOH B 95 995 95 HOH HOH . J 5 HOH B 96 996 79 HOH HOH . J 5 HOH B 97 997 192 HOH HOH . J 5 HOH B 98 998 184 HOH HOH . J 5 HOH B 99 999 126 HOH HOH . J 5 HOH B 100 1000 216 HOH HOH . J 5 HOH B 101 1001 133 HOH HOH . J 5 HOH B 102 1002 120 HOH HOH . J 5 HOH B 103 1003 122 HOH HOH . J 5 HOH B 104 1004 71 HOH HOH . J 5 HOH B 105 1005 226 HOH HOH . J 5 HOH B 106 1006 34 HOH HOH . J 5 HOH B 107 1007 175 HOH HOH . J 5 HOH B 108 1008 53 HOH HOH . J 5 HOH B 109 1009 158 HOH HOH . J 5 HOH B 110 1010 205 HOH HOH . J 5 HOH B 111 1011 225 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 11.006 _atom_site.Cartn_y -5.004 _atom_site.Cartn_z -19.226 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 803 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #