data_6KPG
#
_model_server_result.job_id            gNgOdLAyusq6bYpHhT8WIA 
_model_server_result.datetime_utc      '2024-10-11 00:33:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6kpg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
#
_entry.id    6KPG 
#
_exptl.entry_id    6KPG 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              445.658 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (6~{a}~{R},9~{R},10~{a}~{R})-9-(hydroxymethyl)-3-(8-isothiocyanato-2-methyl-octan-2-yl)-6,6-dimethyl-6~{a},7,8,9,10,10~{a}-hexahydrobenzo[c]chromen-1-ol 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6KPG 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KPG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             F 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 301 R CYS 257 1_555 D SG CYS 308 R CYS 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf2 E SG CYS 159 S CYS 147 1_555 E SG CYS 229 S CYS 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
#
_chem_comp.formula           'C26 H39 N O3 S' 
_chem_comp.formula_weight    445.658 
_chem_comp.id                8D0 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (6~{a}~{R},9~{R},10~{a}~{R})-9-(hydroxymethyl)-3-(8-isothiocyanato-2-methyl-octan-2-yl)-6,6-dimethyl-6~{a},7,8,9,10,10~{a}-hexahydrobenzo[c]chromen-1-ol 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6KPG 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          F 
_pdbx_nonpoly_scheme.entity_id        6 
_pdbx_nonpoly_scheme.mon_id           8D0 
_pdbx_nonpoly_scheme.pdb_strand_id    R 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      501 
_pdbx_nonpoly_scheme.auth_seq_num     501 
_pdbx_nonpoly_scheme.pdb_mon_id       8D0 
_pdbx_nonpoly_scheme.auth_mon_id      AML 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 8D0 . . . F 6 103.715 143.457 132.941 1 101.77 ? C1 8D0 501 R 1 
HETATM 2 C C2 8D0 . . . F 6 103.834 144.113 131.7 1 101.77 ? C2 8D0 501 R 1 
HETATM 3 C C3 8D0 . . . F 6 103.184 145.345 131.512 1 101.77 ? C3 8D0 501 R 1 
HETATM 4 C C4 8D0 . . . F 6 102.419 145.94 132.539 1 101.77 ? C4 8D0 501 R 1 
HETATM 5 C C5 8D0 . . . F 6 102.299 145.274 133.813 1 101.77 ? C5 8D0 501 R 1 
HETATM 6 N N1 8D0 . . . F 6 110.589 144.365 134.21 1 101.77 ? N1 8D0 501 R 1 
HETATM 7 C C10 8D0 . . . F 6 101.559 147.415 135.264 1 101.77 ? C10 8D0 501 R 1 
HETATM 8 C C11 8D0 . . . F 6 100.761 147.84 136.487 1 101.77 ? C11 8D0 501 R 1 
HETATM 9 C C12 8D0 . . . F 6 101.331 147.162 137.719 1 101.77 ? C12 8D0 501 R 1 
HETATM 10 C C13 8D0 . . . F 6 101.163 145.659 137.539 1 101.77 ? C13 8D0 501 R 1 
HETATM 11 C C14 8D0 . . . F 6 100.841 149.356 136.643 1 101.77 ? C14 8D0 501 R 1 
HETATM 12 C C15 8D0 . . . F 6 102.644 143.179 137.471 1 101.77 ? C15 8D0 501 R 1 
HETATM 13 C C16 8D0 . . . F 6 100.644 143.132 136.011 1 101.77 ? C16 8D0 501 R 1 
HETATM 14 C C17 8D0 . . . F 6 104.657 143.532 130.555 1 101.77 ? C17 8D0 501 R 1 
HETATM 15 C C18 8D0 . . . F 6 106.073 144.155 130.607 1 101.77 ? C18 8D0 501 R 1 
HETATM 16 C C19 8D0 . . . F 6 104.741 142.012 130.638 1 101.77 ? C19 8D0 501 R 1 
HETATM 17 C C20 8D0 . . . F 6 103.986 143.893 129.239 1 101.77 ? C20 8D0 501 R 1 
HETATM 18 C C21 8D0 . . . F 6 106.997 143.527 131.672 1 101.77 ? C21 8D0 501 R 1 
HETATM 19 C C22 8D0 . . . F 6 108.418 144.074 131.641 1 101.77 ? C22 8D0 501 R 1 
HETATM 20 C C23 8D0 . . . F 6 108.525 145.501 132.177 1 101.77 ? C23 8D0 501 R 1 
HETATM 21 C C24 8D0 . . . F 6 109.987 145.896 132.443 1 101.77 ? C24 8D0 501 R 1 
HETATM 22 C C25 8D0 . . . F 6 110.336 145.737 133.928 1 101.77 ? C25 8D0 501 R 1 
HETATM 23 C C6 8D0 . . . F 6 102.962 144.019 133.99 1 101.77 ? C6 8D0 501 R 1 
HETATM 24 C C7 8D0 . . . F 6 101.482 145.839 135.01 1 101.77 ? C7 8D0 501 R 1 
HETATM 25 C C8 8D0 . . . F 6 102 145.22 136.252 1 101.77 ? C8 8D0 501 R 1 
HETATM 26 C C9 8D0 . . . F 6 102.054 143.707 136.172 1 101.77 ? C9 8D0 501 R 1 
HETATM 27 O O1 8D0 . . . F 6 102.923 143.279 135.144 1 101.77 ? O1 8D0 501 R 1 
HETATM 28 O O2 8D0 . . . F 6 99.53 149.824 136.867 1 101.77 ? O2 8D0 501 R 1 
HETATM 29 O O3 8D0 . . . F 6 101.842 147.151 132.166 1 101.77 ? O3 8D0 501 R 1 
HETATM 30 C C26 8D0 . . . F 6 111.115 144.046 135.243 1 101.77 ? C26 8D0 501 R 1 
HETATM 31 S S1 8D0 . . . F 6 111.81 143.603 136.594 1 101.77 ? S1 8D0 501 R 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           31 
#