data_6KR3
#
_model_server_result.job_id            yTxaB_ADiZsrFunYUFM1AQ 
_model_server_result.datetime_utc      '2024-10-19 16:45:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6kr3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"AA","auth_seq_id":1007}' 
#
_entry.id    6KR3 
#
_exptl.entry_id    6KR3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6KR3 
_cell.length_a            178.845 
_cell.length_b            209.975 
_cell.length_c            157.873 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KR3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,EA 1 1 
B,U,V,W,X,Y,Z,AA,BA,CA,DA,FA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 Q N N 
? 4 R N N 
? 4 Z N N 
? 4 AA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 443 A HIS 442 1_555 Q ZN ZN . A ZN 1015 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
metalc ? metalc2 A SG CYS 448 A CYS 447 1_555 Q ZN ZN . A ZN 1015 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
metalc ? metalc3 A SG CYS 451 A CYS 450 1_555 Q ZN ZN . A ZN 1015 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.906 ? 
metalc ? metalc4 A NE2 HIS 713 A HIS 712 1_555 R ZN ZN . A ZN 1016 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.761 ? 
metalc ? metalc5 A NE2 HIS 715 A HIS 714 1_555 R ZN ZN . A ZN 1016 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? 
metalc ? metalc6 A SG CYS 729 A CYS 728 1_555 R ZN ZN . A ZN 1016 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? 
metalc ? metalc7 A SG CYS 848 A CYS 847 1_555 R ZN ZN . A ZN 1016 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? 
metalc ? metalc8 B NE2 HIS 443 B HIS 442 1_555 Z ZN ZN . B ZN 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
metalc ? metalc9 B SG CYS 451 B CYS 450 1_555 Z ZN ZN . B ZN 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
metalc ? metalc10 B NE2 HIS 713 B HIS 712 1_555 AA ZN ZN . B ZN 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.741 ? 
metalc ? metalc11 B NE2 HIS 715 B HIS 714 1_555 AA ZN ZN . B ZN 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.76 ? 
metalc ? metalc12 B SG CYS 729 B CYS 728 1_555 AA ZN ZN . B ZN 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? 
metalc ? metalc13 B SG CYS 848 B CYS 847 1_555 AA ZN ZN . B ZN 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.966 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6KR3 
_atom_sites.fract_transf_matrix[1][1]    0.005591 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004762 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006334 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 IOD A 1 1001 501 IOD IOD . 
D 2 IOD A 1 1002 502 IOD IOD . 
E 2 IOD A 1 1003 503 IOD IOD . 
F 2 IOD A 1 1004 504 IOD IOD . 
G 2 IOD A 1 1005 505 IOD IOD . 
H 2 IOD A 1 1006 506 IOD IOD . 
I 2 IOD A 1 1007 509 IOD IOD . 
J 2 IOD A 1 1008 510 IOD IOD . 
K 2 IOD A 1 1009 512 IOD IOD . 
L 2 IOD A 1 1010 517 IOD IOD . 
M 2 IOD A 1 1011 518 IOD IOD . 
N 2 IOD A 1 1012 520 IOD IOD . 
O 3 SAH A 1 1013 1001 SAH SAH . 
P 3 SAH A 1 1014 1011 SAH SAH . 
Q 4 ZN A 1 1015 2001 ZN ZN . 
R 4 ZN A 1 1016 2002 ZN ZN . 
S 5 GOL A 1 1017 128 GOL GOL . 
T 5 GOL A 1 1018 129 GOL GOL . 
U 2 IOD B 1 1001 507 IOD IOD . 
V 2 IOD B 1 1002 508 IOD IOD . 
W 2 IOD B 1 1003 514 IOD IOD . 
X 3 SAH B 1 1004 1031 SAH SAH . 
Y 3 SAH B 1 1005 1041 SAH SAH . 
Z 4 ZN B 1 1006 2003 ZN ZN . 
AA 4 ZN B 1 1007 2004 ZN ZN . 
BA 5 GOL B 1 1008 125 GOL GOL . 
CA 5 GOL B 1 1009 126 GOL GOL . 
DA 5 GOL B 1 1010 130 GOL GOL . 
EA 6 HOH A 1 1101 5 HOH HOH . 
EA 6 HOH A 2 1102 10 HOH HOH . 
EA 6 HOH A 3 1103 46 HOH HOH . 
EA 6 HOH A 4 1104 16 HOH HOH . 
EA 6 HOH A 5 1105 7 HOH HOH . 
EA 6 HOH A 6 1106 44 HOH HOH . 
EA 6 HOH A 7 1107 9 HOH HOH . 
EA 6 HOH A 8 1108 34 HOH HOH . 
EA 6 HOH A 9 1109 42 HOH HOH . 
EA 6 HOH A 10 1110 45 HOH HOH . 
EA 6 HOH A 11 1111 3 HOH HOH . 
EA 6 HOH A 12 1112 14 HOH HOH . 
EA 6 HOH A 13 1113 4 HOH HOH . 
EA 6 HOH A 14 1114 15 HOH HOH . 
EA 6 HOH A 15 1115 43 HOH HOH . 
EA 6 HOH A 16 1116 41 HOH HOH . 
EA 6 HOH A 17 1117 39 HOH HOH . 
EA 6 HOH A 18 1118 32 HOH HOH . 
EA 6 HOH A 19 1119 47 HOH HOH . 
EA 6 HOH A 20 1120 2 HOH HOH . 
EA 6 HOH A 21 1121 6 HOH HOH . 
EA 6 HOH A 22 1122 18 HOH HOH . 
EA 6 HOH A 23 1123 31 HOH HOH . 
EA 6 HOH A 24 1124 13 HOH HOH . 
EA 6 HOH A 25 1125 49 HOH HOH . 
EA 6 HOH A 26 1126 17 HOH HOH . 
EA 6 HOH A 27 1127 11 HOH HOH . 
EA 6 HOH A 28 1128 38 HOH HOH . 
EA 6 HOH A 29 1129 35 HOH HOH . 
EA 6 HOH A 30 1130 37 HOH HOH . 
EA 6 HOH A 31 1131 36 HOH HOH . 
FA 6 HOH B 1 1101 27 HOH HOH . 
FA 6 HOH B 2 1102 40 HOH HOH . 
FA 6 HOH B 3 1103 28 HOH HOH . 
FA 6 HOH B 4 1104 19 HOH HOH . 
FA 6 HOH B 5 1105 1 HOH HOH . 
FA 6 HOH B 6 1106 24 HOH HOH . 
FA 6 HOH B 7 1107 8 HOH HOH . 
FA 6 HOH B 8 1108 22 HOH HOH . 
FA 6 HOH B 9 1109 51 HOH HOH . 
FA 6 HOH B 10 1110 50 HOH HOH . 
FA 6 HOH B 11 1111 29 HOH HOH . 
FA 6 HOH B 12 1112 26 HOH HOH . 
FA 6 HOH B 13 1113 23 HOH HOH . 
FA 6 HOH B 14 1114 30 HOH HOH . 
FA 6 HOH B 15 1115 25 HOH HOH . 
FA 6 HOH B 16 1116 21 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         AA 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -71.898 
_atom_site.Cartn_y               -25.886 
_atom_site.Cartn_z               12.341 
_atom_site.occupancy             0.87 
_atom_site.B_iso_or_equiv        62.89 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1007 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           241 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           1 
#