data_6KR4
#
_model_server_result.job_id            ZyQ3nk0_vdjv49Hxg1N_Zw 
_model_server_result.datetime_utc      '2024-12-12 14:51:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6kr4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":2003}' 
#
_entry.id    6KR4 
#
_exptl.entry_id    6KR4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              94.971 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHATE ION' 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.85 
_cell.angle_gamma         90 
_cell.entry_id            6KR4 
_cell.length_a            250.378 
_cell.length_b            147.678 
_cell.length_c            143.972 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KR4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
? dimeric 2 author_defined_assembly 3 
? dimeric 2 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,I,J,S,T,X 1 1 
B,F,K,L,U,Y 2 1 
C,H,M,N,O,V 3 1 
D,G,P,Q,R,W 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 L N N 
? 4 O N N 
? 4 R N N 
? 4 S N N 
#
_chem_comp.formula           'O4 P -3' 
_chem_comp.formula_weight    94.971 
_chem_comp.id                PO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1 PO4 doub 357 n n 
P O2 PO4 sing 358 n n 
P O3 PO4 sing 359 n n 
P O4 PO4 sing 360 n n 
#
_atom_sites.entry_id                     6KR4 
_atom_sites.fract_transf_matrix[1][1]    0.003994 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000985 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006771 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007154 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 PG4 A 1 2001 2 PG4 PG4 . 
J 4 PO4 A 1 2002 4 PO4 PO4 . 
K 3 PG4 B 1 2001 3 PG4 PG4 . 
L 4 PO4 B 1 2002 5 PO4 PO4 . 
M 3 PG4 C 1 2001 1 PG4 PG4 . 
N 5 PGE C 1 2002 1 PGE PGE . 
O 4 PO4 C 1 2003 2 PO4 PO4 . 
P 6 P6G D 1 2001 1 P6G P6G . 
Q 5 PGE D 1 2002 2 PGE PGE . 
R 4 PO4 D 1 2003 3 PO4 PO4 . 
S 4 PO4 E 1 1201 1 PO4 PO4 . 
T 7 HOH A 1 2101 70 HOH HOH . 
T 7 HOH A 2 2102 45 HOH HOH . 
T 7 HOH A 3 2103 25 HOH HOH . 
T 7 HOH A 4 2104 67 HOH HOH . 
T 7 HOH A 5 2105 101 HOH HOH . 
T 7 HOH A 6 2106 66 HOH HOH . 
T 7 HOH A 7 2107 128 HOH HOH . 
T 7 HOH A 8 2108 88 HOH HOH . 
T 7 HOH A 9 2109 21 HOH HOH . 
T 7 HOH A 10 2110 152 HOH HOH . 
T 7 HOH A 11 2111 57 HOH HOH . 
T 7 HOH A 12 2112 98 HOH HOH . 
T 7 HOH A 13 2113 147 HOH HOH . 
T 7 HOH A 14 2114 99 HOH HOH . 
T 7 HOH A 15 2115 68 HOH HOH . 
T 7 HOH A 16 2116 12 HOH HOH . 
T 7 HOH A 17 2117 150 HOH HOH . 
T 7 HOH A 18 2118 40 HOH HOH . 
T 7 HOH A 19 2119 65 HOH HOH . 
T 7 HOH A 20 2120 123 HOH HOH . 
T 7 HOH A 21 2121 80 HOH HOH . 
T 7 HOH A 22 2122 46 HOH HOH . 
T 7 HOH A 23 2123 133 HOH HOH . 
T 7 HOH A 24 2124 29 HOH HOH . 
T 7 HOH A 25 2125 120 HOH HOH . 
T 7 HOH A 26 2126 76 HOH HOH . 
T 7 HOH A 27 2127 160 HOH HOH . 
T 7 HOH A 28 2128 48 HOH HOH . 
T 7 HOH A 29 2129 148 HOH HOH . 
T 7 HOH A 30 2130 125 HOH HOH . 
T 7 HOH A 31 2131 47 HOH HOH . 
T 7 HOH A 32 2132 90 HOH HOH . 
T 7 HOH A 33 2133 8 HOH HOH . 
T 7 HOH A 34 2134 23 HOH HOH . 
T 7 HOH A 35 2135 50 HOH HOH . 
T 7 HOH A 36 2136 14 HOH HOH . 
T 7 HOH A 37 2137 56 HOH HOH . 
T 7 HOH A 38 2138 136 HOH HOH . 
T 7 HOH A 39 2139 131 HOH HOH . 
T 7 HOH A 40 2140 144 HOH HOH . 
T 7 HOH A 41 2141 104 HOH HOH . 
T 7 HOH A 42 2142 159 HOH HOH . 
T 7 HOH A 43 2143 53 HOH HOH . 
T 7 HOH A 44 2144 93 HOH HOH . 
T 7 HOH A 45 2145 24 HOH HOH . 
T 7 HOH A 46 2146 13 HOH HOH . 
T 7 HOH A 47 2147 126 HOH HOH . 
T 7 HOH A 48 2148 58 HOH HOH . 
T 7 HOH A 49 2149 113 HOH HOH . 
T 7 HOH A 50 2150 4 HOH HOH . 
T 7 HOH A 51 2151 143 HOH HOH . 
T 7 HOH A 52 2152 87 HOH HOH . 
T 7 HOH A 53 2153 30 HOH HOH . 
T 7 HOH A 54 2154 31 HOH HOH . 
T 7 HOH A 55 2155 142 HOH HOH . 
T 7 HOH A 56 2156 6 HOH HOH . 
T 7 HOH A 57 2157 158 HOH HOH . 
T 7 HOH A 58 2158 96 HOH HOH . 
T 7 HOH A 59 2159 81 HOH HOH . 
T 7 HOH A 60 2160 61 HOH HOH . 
T 7 HOH A 61 2161 55 HOH HOH . 
T 7 HOH A 62 2162 112 HOH HOH . 
T 7 HOH A 63 2163 114 HOH HOH . 
T 7 HOH A 64 2164 146 HOH HOH . 
T 7 HOH A 65 2165 89 HOH HOH . 
T 7 HOH A 66 2166 103 HOH HOH . 
T 7 HOH A 67 2167 69 HOH HOH . 
T 7 HOH A 68 2168 130 HOH HOH . 
T 7 HOH A 69 2169 122 HOH HOH . 
T 7 HOH A 70 2170 105 HOH HOH . 
T 7 HOH A 71 2171 91 HOH HOH . 
T 7 HOH A 72 2172 102 HOH HOH . 
T 7 HOH A 73 2173 115 HOH HOH . 
T 7 HOH A 74 2174 1 HOH HOH . 
T 7 HOH A 75 2175 36 HOH HOH . 
T 7 HOH A 76 2176 155 HOH HOH . 
T 7 HOH A 77 2177 22 HOH HOH . 
T 7 HOH A 78 2178 54 HOH HOH . 
T 7 HOH A 79 2179 157 HOH HOH . 
T 7 HOH A 80 2180 74 HOH HOH . 
T 7 HOH A 81 2181 11 HOH HOH . 
T 7 HOH A 82 2182 42 HOH HOH . 
T 7 HOH A 83 2183 73 HOH HOH . 
T 7 HOH A 84 2184 154 HOH HOH . 
T 7 HOH A 85 2185 100 HOH HOH . 
T 7 HOH A 86 2186 121 HOH HOH . 
T 7 HOH A 87 2187 51 HOH HOH . 
T 7 HOH A 88 2188 78 HOH HOH . 
T 7 HOH A 89 2189 71 HOH HOH . 
T 7 HOH A 90 2190 161 HOH HOH . 
T 7 HOH A 91 2191 94 HOH HOH . 
T 7 HOH A 92 2192 20 HOH HOH . 
T 7 HOH A 93 2193 149 HOH HOH . 
T 7 HOH A 94 2194 79 HOH HOH . 
U 7 HOH B 1 2101 3 HOH HOH . 
U 7 HOH B 2 2102 15 HOH HOH . 
U 7 HOH B 3 2103 62 HOH HOH . 
U 7 HOH B 4 2104 106 HOH HOH . 
V 7 HOH C 1 2101 28 HOH HOH . 
V 7 HOH C 2 2102 110 HOH HOH . 
V 7 HOH C 3 2103 117 HOH HOH . 
V 7 HOH C 4 2104 17 HOH HOH . 
V 7 HOH C 5 2105 39 HOH HOH . 
V 7 HOH C 6 2106 151 HOH HOH . 
V 7 HOH C 7 2107 38 HOH HOH . 
V 7 HOH C 8 2108 16 HOH HOH . 
V 7 HOH C 9 2109 27 HOH HOH . 
V 7 HOH C 10 2110 116 HOH HOH . 
V 7 HOH C 11 2111 18 HOH HOH . 
V 7 HOH C 12 2112 49 HOH HOH . 
V 7 HOH C 13 2113 32 HOH HOH . 
V 7 HOH C 14 2114 64 HOH HOH . 
V 7 HOH C 15 2115 107 HOH HOH . 
V 7 HOH C 16 2116 97 HOH HOH . 
V 7 HOH C 17 2117 26 HOH HOH . 
V 7 HOH C 18 2118 34 HOH HOH . 
V 7 HOH C 19 2119 109 HOH HOH . 
V 7 HOH C 20 2120 141 HOH HOH . 
V 7 HOH C 21 2121 86 HOH HOH . 
V 7 HOH C 22 2122 118 HOH HOH . 
V 7 HOH C 23 2123 145 HOH HOH . 
V 7 HOH C 24 2124 124 HOH HOH . 
V 7 HOH C 25 2125 43 HOH HOH . 
V 7 HOH C 26 2126 82 HOH HOH . 
V 7 HOH C 27 2127 119 HOH HOH . 
V 7 HOH C 28 2128 140 HOH HOH . 
V 7 HOH C 29 2129 52 HOH HOH . 
V 7 HOH C 30 2130 83 HOH HOH . 
V 7 HOH C 31 2131 37 HOH HOH . 
V 7 HOH C 32 2132 95 HOH HOH . 
V 7 HOH C 33 2133 84 HOH HOH . 
V 7 HOH C 34 2134 127 HOH HOH . 
V 7 HOH C 35 2135 63 HOH HOH . 
V 7 HOH C 36 2136 44 HOH HOH . 
V 7 HOH C 37 2137 135 HOH HOH . 
V 7 HOH C 38 2138 85 HOH HOH . 
V 7 HOH C 39 2139 134 HOH HOH . 
V 7 HOH C 40 2140 60 HOH HOH . 
V 7 HOH C 41 2141 77 HOH HOH . 
V 7 HOH C 42 2142 108 HOH HOH . 
V 7 HOH C 43 2143 153 HOH HOH . 
W 7 HOH D 1 2101 138 HOH HOH . 
W 7 HOH D 2 2102 162 HOH HOH . 
W 7 HOH D 3 2103 33 HOH HOH . 
W 7 HOH D 4 2104 35 HOH HOH . 
W 7 HOH D 5 2105 72 HOH HOH . 
W 7 HOH D 6 2106 5 HOH HOH . 
W 7 HOH D 7 2107 7 HOH HOH . 
W 7 HOH D 8 2108 139 HOH HOH . 
W 7 HOH D 9 2109 111 HOH HOH . 
W 7 HOH D 10 2110 75 HOH HOH . 
W 7 HOH D 11 2111 137 HOH HOH . 
W 7 HOH D 12 2112 41 HOH HOH . 
W 7 HOH D 13 2113 2 HOH HOH . 
W 7 HOH D 14 2114 132 HOH HOH . 
W 7 HOH D 15 2115 92 HOH HOH . 
W 7 HOH D 16 2116 9 HOH HOH . 
X 7 HOH E 1 1301 59 HOH HOH . 
X 7 HOH E 2 1302 156 HOH HOH . 
X 7 HOH E 3 1303 19 HOH HOH . 
Y 7 HOH F 1 1201 129 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P PO4 . . . O 4 -10.876 69.069 128.078 1 156.75 ? P PO4 2003 C 1 
HETATM 2 O O1 PO4 . . . O 4 -11.207 69.873 126.847 1 161.42 ? O1 PO4 2003 C 1 
HETATM 3 O O2 PO4 . . . O 4 -9.474 69.399 128.539 1 160.38 ? O2 PO4 2003 C 1 
HETATM 4 O O3 PO4 . . . O 4 -10.965 67.602 127.745 1 164.36 ? O3 PO4 2003 C 1 
HETATM 5 O O4 PO4 . . . O 4 -11.869 69.392 129.166 1 159.99 ? O4 PO4 2003 C 1 
#
_model_server_stats.io_time_ms              100 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    70 
_model_server_stats.query_time_ms           364 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           5 
#