data_6KR6 # _model_server_result.job_id dkJQkMA2tLb-I6OAfzfKUA _model_server_result.datetime_utc '2024-11-23 21:12:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6kr6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 6KR6 # _exptl.entry_id 6KR6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KR6 _cell.length_a 62.09 _cell.length_b 115.64 _cell.length_c 119.89 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KR6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 L N N ? 3 M N N ? 3 N N N ? 3 O N N ? 3 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O3' U 4 B U 4 1_555 B P N 5 B N 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.607 ? metalc ? metalc1 A NE2 HIS 83 A HIS 116 1_555 L ZN ZN . A ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc2 A NE2 HIS 85 A HIS 118 1_555 L ZN ZN . A ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc3 A OE1 GLN 119 A GLN 152 1_555 L ZN ZN . A ZN 910 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc4 A O CYS 155 A CYS 188 1_555 J HG HG . A HG 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.873 ? metalc ? metalc5 A SG CYS 155 A CYS 188 1_555 J HG HG . A HG 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.738 ? metalc ? metalc6 A OE1 GLN 210 A GLN 243 1_555 J HG HG . A HG 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc7 A NE2 GLN 210 A GLN 243 1_555 J HG HG . A HG 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc8 A NE2 HIS 211 A HIS 244 1_555 D ZN ZN . A ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc9 A SG CYS 238 A CYS 271 1_555 K HG HG . A HG 909 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.725 ? metalc ? metalc10 A OE2 GLU 381 A GLU 414 1_555 P ZN ZN . A ZN 914 3_654 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc11 A NE2 HIS 413 A HIS 446 1_555 M ZN ZN . A ZN 911 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc12 A OD1 ASP 440 A ASP 473 1_555 O ZN ZN . A ZN 913 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc13 A OD2 ASP 440 A ASP 473 1_555 O ZN ZN . A ZN 913 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc14 A OD1 ASP 443 A ASP 476 1_555 O ZN ZN . A ZN 913 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc15 A NE2 HIS 455 A HIS 488 1_555 P ZN ZN . A ZN 914 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? metalc ? metalc16 A OE1 GLN 479 A GLN 512 1_555 H HG HG . A HG 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.741 ? metalc ? metalc17 A SG CYS 498 A CYS 531 1_555 H HG HG . A HG 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc18 A OG SER 501 A SER 534 1_555 H HG HG . A HG 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? metalc ? metalc19 A OD2 ASP 502 A ASP 535 1_555 L ZN ZN . A ZN 910 3_544 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc20 A OE1 GLN 556 A GLN 589 1_555 C ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc21 A OD1 ASP 581 A ASP 614 1_555 N ZN ZN . A ZN 912 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc22 A OD2 ASP 581 A ASP 614 1_555 N ZN ZN . A ZN 912 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc23 A SG CYS 615 A CYS 648 1_555 I HG HG . A HG 907 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.771 ? metalc ? metalc24 A SG CYS 615 A CYS 648 1_555 I HG HG . A HG 907 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.738 ? metalc ? metalc25 A OD2 ASP 652 A ASP 685 1_555 G HG HG . A HG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc26 A OD1 ASP 652 A ASP 685 1_555 N ZN ZN . A ZN 912 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc27 A O CYS 781 A CYS 814 1_555 G HG HG . A HG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.149 ? metalc ? metalc28 A SG CYS 781 A CYS 814 1_555 G HG HG . A HG 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.747 ? metalc ? metalc29 A ND1 HIS 796 A HIS 829 1_555 E ZN ZN . A ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc30 A O LEU 810 A LEU 843 1_555 C ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? metalc ? metalc31 A OXT LEU 810 A LEU 843 1_555 C ZN ZN . A ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc32 C ZN ZN . A ZN 901 1_555 B OP3 U 1 B U 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc33 C ZN ZN . A ZN 901 1_555 B OP2 U 1 B U 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc34 C ZN ZN . A ZN 901 1_555 B OP1 U 3 B U 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6KR6 _atom_sites.fract_transf_matrix[1][1] 0.016106 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008648 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008341 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 901 1 ZN ZN . D 3 ZN A 1 902 2 ZN ZN . E 3 ZN A 1 903 3 ZN ZN . F 4 HG A 1 904 7 HG HG . G 4 HG A 1 905 1 HG HG . H 4 HG A 1 906 2 HG HG . I 4 HG A 1 907 3 HG HG . J 4 HG A 1 908 4 HG HG . K 4 HG A 1 909 5 HG HG . L 3 ZN A 1 910 1 ZN ZN . M 3 ZN A 1 911 2 ZN ZN . N 3 ZN A 1 912 3 ZN ZN . O 3 ZN A 1 913 4 ZN ZN . P 3 ZN A 1 914 7 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 11.033 _atom_site.Cartn_y -11.145 _atom_site.Cartn_z -0.455 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 128.3 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 902 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 1 #