data_6KRH
#
_model_server_result.job_id            kCAMGm3a8ch_NuOyD3poeg 
_model_server_result.datetime_utc      '2024-11-16 01:27:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6krh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    6KRH 
#
_exptl.entry_id    6KRH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              335.227 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6KRH 
_cell.length_a            95.549 
_cell.length_b            95.549 
_cell.length_c            200.589 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KRH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C11 H16 N2 O8 P 1' 
_chem_comp.formula_weight    335.227 
_chem_comp.id                NMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'NICOTINAMIDE MONONUCLEOTIDE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O3P P NMN doub 276 n n 
P O1P NMN sing 277 n n 
P O2P NMN sing 278 n n 
P O5R NMN sing 279 n n 
O1P H1PO NMN sing 280 n n 
O2P H2PO NMN sing 281 n n 
O5R C5R NMN sing 282 n n 
C5R C4R NMN sing 283 n n 
C5R H5R1 NMN sing 284 n n 
C5R H5R2 NMN sing 285 n n 
C4R O4R NMN sing 286 n n 
C4R C3R NMN sing 287 n n 
C4R H4RC NMN sing 288 n n 
O4R C1R NMN sing 289 n n 
C3R O3R NMN sing 290 n n 
C3R C2R NMN sing 291 n n 
C3R H3RC NMN sing 292 n n 
O3R H3RO NMN sing 293 n n 
C2R O2R NMN sing 294 n n 
C2R C1R NMN sing 295 n n 
C2R H2RC NMN sing 296 n n 
O2R H2RO NMN sing 297 n n 
C1R N1 NMN sing 298 n n 
C1R H1RC NMN sing 299 n n 
N1 C2 NMN doub 300 n y 
N1 C6 NMN sing 301 n y 
C2 C3 NMN sing 302 n y 
C2 HC2 NMN sing 303 n n 
C3 C7 NMN sing 304 n n 
C3 C4 NMN doub 305 n y 
C7 O7 NMN doub 306 n n 
C7 N7 NMN sing 307 n n 
N7 HN71 NMN sing 308 n n 
N7 HN72 NMN sing 309 n n 
C4 C5 NMN sing 310 n y 
C4 HC4 NMN sing 311 n n 
C5 C6 NMN doub 312 n y 
C5 HC5 NMN sing 313 n n 
C6 HC6 NMN sing 314 n n 
#
_atom_sites.entry_id                     6KRH 
_atom_sites.fract_transf_matrix[1][1]    0.010466 
_atom_sites.fract_transf_matrix[1][2]    0.006042 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012085 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004985 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 AMP A 1 401 401 AMP AMP . 
C 3 NMN A 1 402 402 NMN NMN . 
D 4 SO4 A 1 403 403 SO4 SO4 . 
E 4 SO4 A 1 404 404 SO4 SO4 . 
F 4 SO4 A 1 405 405 SO4 SO4 . 
G 4 SO4 A 1 406 406 SO4 SO4 . 
H 5 HOH A 1 501 501 HOH HOH . 
H 5 HOH A 2 502 502 HOH HOH . 
H 5 HOH A 3 503 503 HOH HOH . 
H 5 HOH A 4 504 504 HOH HOH . 
H 5 HOH A 5 505 505 HOH HOH . 
H 5 HOH A 6 506 506 HOH HOH . 
H 5 HOH A 7 507 507 HOH HOH . 
H 5 HOH A 8 508 508 HOH HOH . 
H 5 HOH A 9 509 509 HOH HOH . 
H 5 HOH A 10 510 510 HOH HOH . 
H 5 HOH A 11 511 511 HOH HOH . 
H 5 HOH A 12 512 512 HOH HOH . 
H 5 HOH A 13 513 513 HOH HOH . 
H 5 HOH A 14 514 514 HOH HOH . 
H 5 HOH A 15 515 516 HOH HOH . 
H 5 HOH A 16 516 517 HOH HOH . 
H 5 HOH A 17 517 518 HOH HOH . 
H 5 HOH A 18 518 519 HOH HOH . 
H 5 HOH A 19 519 520 HOH HOH . 
H 5 HOH A 20 520 521 HOH HOH . 
H 5 HOH A 21 521 522 HOH HOH . 
H 5 HOH A 22 522 523 HOH HOH . 
H 5 HOH A 23 523 524 HOH HOH . 
H 5 HOH A 24 524 525 HOH HOH . 
H 5 HOH A 25 525 526 HOH HOH . 
H 5 HOH A 26 526 527 HOH HOH . 
H 5 HOH A 27 527 528 HOH HOH . 
H 5 HOH A 28 528 529 HOH HOH . 
H 5 HOH A 29 529 530 HOH HOH . 
H 5 HOH A 30 530 531 HOH HOH . 
H 5 HOH A 31 531 532 HOH HOH . 
H 5 HOH A 32 532 515 HOH HOH . 
H 5 HOH A 33 533 533 HOH HOH . 
H 5 HOH A 34 534 534 HOH HOH . 
H 5 HOH A 35 535 535 HOH HOH . 
H 5 HOH A 36 536 536 HOH HOH . 
H 5 HOH A 37 537 537 HOH HOH . 
H 5 HOH A 38 538 538 HOH HOH . 
H 5 HOH A 39 539 539 HOH HOH . 
H 5 HOH A 40 540 540 HOH HOH . 
H 5 HOH A 41 541 541 HOH HOH . 
H 5 HOH A 42 542 542 HOH HOH . 
H 5 HOH A 43 543 543 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O3P NMN . . . C 3 17.005 17.342 88.506 1 100.31 ? O3P NMN 402 A 1 
HETATM 2 P P NMN . . . C 3 17.102 18.687 89.143 1 104.93 ? P NMN 402 A 1 
HETATM 3 O O1P NMN . . . C 3 15.869 19.422 88.819 1 86.87 ? O1P NMN 402 A 1 
HETATM 4 O O2P NMN . . . C 3 17.575 18.757 90.533 1 91.34 ? O2P NMN 402 A 1 
HETATM 5 O O5R NMN . . . C 3 18.471 19.363 88.586 1 92.27 ? O5R NMN 402 A 1 
HETATM 6 C C5R NMN . . . C 3 18.677 20.588 87.892 1 88.07 ? C5R NMN 402 A 1 
HETATM 7 C C4R NMN . . . C 3 19.214 20.401 86.488 1 84.07 ? C4R NMN 402 A 1 
HETATM 8 O O4R NMN . . . C 3 18.666 21.375 85.667 1 82.41 ? O4R NMN 402 A 1 
HETATM 9 C C3R NMN . . . C 3 20.674 20.652 86.377 1 82.95 ? C3R NMN 402 A 1 
HETATM 10 O O3R NMN . . . C 3 21.333 19.62 85.691 1 89.36 ? O3R NMN 402 A 1 
HETATM 11 C C2R NMN . . . C 3 20.778 21.884 85.562 1 72.14 ? C2R NMN 402 A 1 
HETATM 12 O O2R NMN . . . C 3 21.983 22.018 84.845 1 59.3 ? O2R NMN 402 A 1 
HETATM 13 C C1R NMN . . . C 3 19.555 21.818 84.707 1 65.91 ? C1R NMN 402 A 1 
HETATM 14 N N1 NMN . . . C 3 19.26 23.143 84.217 1 59.14 ? N1 NMN 402 A 1 
HETATM 15 C C2 NMN . . . C 3 19.731 23.586 83.084 1 54.17 ? C2 NMN 402 A 1 
HETATM 16 C C3 NMN . . . C 3 19.459 24.876 82.717 1 50.88 ? C3 NMN 402 A 1 
HETATM 17 C C7 NMN . . . C 3 19.865 25.53 81.463 1 60.1 ? C7 NMN 402 A 1 
HETATM 18 O O7 NMN . . . C 3 19.427 26.544 81.161 1 59.68 ? O7 NMN 402 A 1 
HETATM 19 N N7 NMN . . . C 3 20.698 25.046 80.64 1 52.32 ? N7 NMN 402 A 1 
HETATM 20 C C4 NMN . . . C 3 18.72 25.654 83.524 1 51.97 ? C4 NMN 402 A 1 
HETATM 21 C C5 NMN . . . C 3 18.282 25.173 84.679 1 63.34 ? C5 NMN 402 A 1 
HETATM 22 C C6 NMN . . . C 3 18.592 23.909 85.005 1 67.79 ? C6 NMN 402 A 1 
HETATM 23 H H5R1 NMN . . . C 3 19.377 21.204 88.46 1 105.71 ? H5R1 NMN 402 A 1 
HETATM 24 H H5R2 NMN . . . C 3 17.73 21.13 87.841 1 105.71 ? H5R2 NMN 402 A 1 
HETATM 25 H H4RC NMN . . . C 3 18.974 19.393 86.121 1 100.91 ? H4RC NMN 402 A 1 
HETATM 26 H H3RC NMN . . . C 3 21.109 20.818 87.372 1 99.57 ? H3RC NMN 402 A 1 
HETATM 27 H H3RO NMN . . . C 3 21.677 18.979 86.329 1 107.26 ? H3RO NMN 402 A 1 
HETATM 28 H H2RC NMN . . . C 3 20.669 22.743 86.239 1 86.59 ? H2RC NMN 402 A 1 
HETATM 29 H H2RO NMN . . . C 3 22.723 21.749 85.406 1 71.19 ? H2RO NMN 402 A 1 
HETATM 30 H H1RC NMN . . . C 3 19.685 21.089 83.895 1 79.12 ? H1RC NMN 402 A 1 
HETATM 31 H HC2 NMN . . . C 3 20.321 22.943 82.442 1 65.03 ? HC2 NMN 402 A 1 
HETATM 32 H HN71 NMN . . . C 3 21.109 24.153 80.824 1 62.81 ? HN71 NMN 402 A 1 
HETATM 33 H HN72 NMN . . . C 3 20.929 25.548 79.795 1 62.81 ? HN72 NMN 402 A 1 
HETATM 34 H HC4 NMN . . . C 3 18.488 26.672 83.236 1 62.4 ? HC4 NMN 402 A 1 
HETATM 35 H HC5 NMN . . . C 3 17.693 25.789 85.347 1 76.03 ? HC5 NMN 402 A 1 
HETATM 36 H HC6 NMN . . . C 3 18.234 23.509 85.946 1 81.38 ? HC6 NMN 402 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           46 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           36 
#