data_6KSI # _model_server_result.job_id g4xTcOFfeFDoTQvjYXr-3w _model_server_result.datetime_utc '2025-01-10 19:51:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ksi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":409}' # _entry.id 6KSI # _exptl.entry_id 6KSI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 88.105 _entity.id 9 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'butanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KSI _cell.length_a 129.913 _cell.length_b 129.913 _cell.length_c 251.224 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KSI _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 9 K N N ? 9 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 98 A HIS 84 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc2 A NE2 HIS 104 A HIS 90 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc3 A O GLY 297 A GLY 283 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc4 A OD2 ASP 362 A ASP 348 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc5 A OD1 ASP 365 A ASP 351 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.813 ? metalc ? metalc6 A OD2 ASP 365 A ASP 351 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? metalc ? metalc7 A OD2 ASP 370 A ASP 356 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.587 ? metalc ? metalc8 A OD2 ASP 373 A ASP 359 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc9 B OD1 ASP 78 B ASP 64 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.974 ? metalc ? metalc10 B NE2 HIS 98 B HIS 84 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc11 B NE2 HIS 104 B HIS 90 1_555 L ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc12 B O GLY 297 B GLY 283 1_555 M CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc13 B OD2 ASP 362 B ASP 348 1_555 M CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc14 B OD1 ASP 365 B ASP 351 1_555 M CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.741 ? metalc ? metalc15 B OD2 ASP 365 B ASP 351 1_555 M CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc16 B OD2 ASP 370 B ASP 356 1_555 M CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc17 B OD2 ASP 373 B ASP 359 1_555 M CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? # _chem_comp.formula 'C4 H8 O2' _chem_comp.formula_weight 88.105 _chem_comp.id BUA _chem_comp.mon_nstd_flag . _chem_comp.name 'butanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C3 C4 BUA sing 89 n n C3 C2 BUA sing 90 n n O1 C4 BUA doub 91 n n C4 O2 BUA sing 92 n n C2 C1 BUA sing 93 n n C1 H11 BUA sing 94 n n C1 H12 BUA sing 95 n n C1 H13 BUA sing 96 n n C2 H21 BUA sing 97 n n C2 H22 BUA sing 98 n n C3 H31 BUA sing 99 n n C3 H32 BUA sing 100 n n O2 HO2 BUA sing 101 n n # _atom_sites.entry_id 6KSI _atom_sites.fract_transf_matrix[1][1] 0.007697 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007697 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003981 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 1 ZN ZN . D 3 CA A 1 402 1 CA CA . E 4 6NA A 1 403 6 6NA 6NA . F 5 DAO A 1 404 1 DAO DAO . G 5 DAO A 1 405 3 DAO DAO . H 6 LEA A 1 406 1 LEA LEA . I 7 OCA A 1 407 2 OCA OCA . J 8 PLM A 1 408 1 PLM PLM . K 9 BUA A 1 409 1 BUA BUA . L 2 ZN B 1 401 2 ZN ZN . M 3 CA B 1 402 2 CA CA . N 4 6NA B 1 403 4 6NA 6NA . O 5 DAO B 1 404 2 DAO DAO . P 6 LEA B 1 405 2 LEA LEA . Q 7 OCA B 1 406 1 OCA OCA . R 9 BUA B 1 407 2 BUA BUA . S 10 HOH A 1 501 66 HOH HOH . S 10 HOH A 2 502 75 HOH HOH . S 10 HOH A 3 503 9 HOH HOH . S 10 HOH A 4 504 33 HOH HOH . S 10 HOH A 5 505 2 HOH HOH . S 10 HOH A 6 506 42 HOH HOH . S 10 HOH A 7 507 13 HOH HOH . S 10 HOH A 8 508 73 HOH HOH . S 10 HOH A 9 509 11 HOH HOH . S 10 HOH A 10 510 20 HOH HOH . S 10 HOH A 11 511 30 HOH HOH . S 10 HOH A 12 512 29 HOH HOH . S 10 HOH A 13 513 35 HOH HOH . S 10 HOH A 14 514 52 HOH HOH . S 10 HOH A 15 515 39 HOH HOH . S 10 HOH A 16 516 5 HOH HOH . S 10 HOH A 17 517 43 HOH HOH . S 10 HOH A 18 518 17 HOH HOH . S 10 HOH A 19 519 55 HOH HOH . S 10 HOH A 20 520 12 HOH HOH . S 10 HOH A 21 521 40 HOH HOH . S 10 HOH A 22 522 41 HOH HOH . S 10 HOH A 23 523 44 HOH HOH . S 10 HOH A 24 524 57 HOH HOH . S 10 HOH A 25 525 1 HOH HOH . S 10 HOH A 26 526 48 HOH HOH . S 10 HOH A 27 527 65 HOH HOH . S 10 HOH A 28 528 59 HOH HOH . S 10 HOH A 29 529 58 HOH HOH . S 10 HOH A 30 530 45 HOH HOH . S 10 HOH A 31 531 38 HOH HOH . S 10 HOH A 32 532 71 HOH HOH . S 10 HOH A 33 533 36 HOH HOH . S 10 HOH A 34 534 25 HOH HOH . S 10 HOH A 35 535 70 HOH HOH . S 10 HOH A 36 536 51 HOH HOH . S 10 HOH A 37 537 31 HOH HOH . S 10 HOH A 38 538 49 HOH HOH . S 10 HOH A 39 539 28 HOH HOH . S 10 HOH A 40 540 6 HOH HOH . S 10 HOH A 41 541 7 HOH HOH . S 10 HOH A 42 542 68 HOH HOH . S 10 HOH A 43 543 76 HOH HOH . S 10 HOH A 44 544 10 HOH HOH . S 10 HOH A 45 545 27 HOH HOH . S 10 HOH A 46 546 72 HOH HOH . S 10 HOH A 47 547 19 HOH HOH . S 10 HOH A 48 548 69 HOH HOH . S 10 HOH A 49 549 47 HOH HOH . S 10 HOH A 50 550 3 HOH HOH . S 10 HOH A 51 551 26 HOH HOH . S 10 HOH A 52 552 74 HOH HOH . S 10 HOH A 53 553 67 HOH HOH . S 10 HOH A 54 554 64 HOH HOH . S 10 HOH A 55 555 24 HOH HOH . S 10 HOH A 56 556 21 HOH HOH . S 10 HOH A 57 557 54 HOH HOH . S 10 HOH A 58 558 23 HOH HOH . S 10 HOH A 59 559 62 HOH HOH . T 10 HOH B 1 501 18 HOH HOH . T 10 HOH B 2 502 46 HOH HOH . T 10 HOH B 3 503 14 HOH HOH . T 10 HOH B 4 504 8 HOH HOH . T 10 HOH B 5 505 16 HOH HOH . T 10 HOH B 6 506 34 HOH HOH . T 10 HOH B 7 507 22 HOH HOH . T 10 HOH B 8 508 32 HOH HOH . T 10 HOH B 9 509 37 HOH HOH . T 10 HOH B 10 510 50 HOH HOH . T 10 HOH B 11 511 4 HOH HOH . T 10 HOH B 12 512 15 HOH HOH . T 10 HOH B 13 513 63 HOH HOH . T 10 HOH B 14 514 61 HOH HOH . T 10 HOH B 15 515 53 HOH HOH . T 10 HOH B 16 516 56 HOH HOH . T 10 HOH B 17 517 60 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BUA . . . K 9 29.625 31.439 -13.249 1 82.12 ? C1 BUA 409 A 1 HETATM 2 C C2 BUA . . . K 9 28.839 32.744 -13.2 1 93.04 ? C2 BUA 409 A 1 HETATM 3 C C3 BUA . . . K 9 27.945 32.943 -11.954 1 96.85 ? C3 BUA 409 A 1 HETATM 4 C C4 BUA . . . K 9 26.759 31.979 -11.772 1 103.94 ? C4 BUA 409 A 1 HETATM 5 O O1 BUA . . . K 9 26.953 30.747 -11.836 1 109.37 ? O1 BUA 409 A 1 HETATM 6 O O2 BUA . . . K 9 25.598 32.412 -11.527 1 102.57 ? O2 BUA 409 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 6 #