data_6KSL # _model_server_result.job_id qp6oQcTwPhbURzmy2pNRSw _model_server_result.datetime_utc '2025-01-11 07:00:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ksl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":404}' # _entry.id 6KSL # _exptl.entry_id 6KSL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.318 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6KSL _cell.length_a 164.209 _cell.length_b 164.209 _cell.length_c 233.053 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KSL _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 I N N ? 4 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 78 A ASP 64 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? metalc ? metalc2 A OD2 ASP 78 A ASP 64 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc3 A NE2 HIS 98 A HIS 84 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc4 A NE2 HIS 104 A HIS 90 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.759 ? metalc ? metalc5 A OD2 ASP 250 A ASP 236 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? metalc ? metalc6 A O GLY 297 A GLY 283 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.517 ? metalc ? metalc7 A OD2 ASP 362 A ASP 348 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc8 A OD1 ASP 365 A ASP 351 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.515 ? metalc ? metalc9 A OD2 ASP 365 A ASP 351 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc10 A OD2 ASP 370 A ASP 356 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? metalc ? metalc11 A OD2 ASP 373 A ASP 359 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.677 ? metalc ? metalc12 B OD1 ASP 78 B ASP 64 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc13 B NE2 HIS 98 B HIS 84 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc14 B NE2 HIS 104 B HIS 90 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc15 B OD2 ASP 250 B ASP 236 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.982 ? metalc ? metalc16 B O GLY 297 B GLY 283 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc17 B OD2 ASP 362 B ASP 348 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc18 B OD1 ASP 365 B ASP 351 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc19 B OD2 ASP 365 B ASP 351 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc20 B OD2 ASP 370 B ASP 356 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc21 B OD2 ASP 373 B ASP 359 1_555 H CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? # _chem_comp.formula 'C12 H24 O2' _chem_comp.formula_weight 200.318 _chem_comp.id DAO _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 DAO doub 83 n n O2 C1 DAO sing 84 n n O2 HO2 DAO sing 85 n n C1 C2 DAO sing 86 n n C2 C3 DAO sing 87 n n C2 H21 DAO sing 88 n n C2 H22 DAO sing 89 n n C3 C4 DAO sing 90 n n C3 H31 DAO sing 91 n n C3 H32 DAO sing 92 n n C4 C5 DAO sing 93 n n C4 H41 DAO sing 94 n n C4 H42 DAO sing 95 n n C5 C6 DAO sing 96 n n C5 H51 DAO sing 97 n n C5 H52 DAO sing 98 n n C6 C7 DAO sing 99 n n C6 H61 DAO sing 100 n n C6 H62 DAO sing 101 n n C7 C8 DAO sing 102 n n C7 H71 DAO sing 103 n n C7 H72 DAO sing 104 n n C8 C9 DAO sing 105 n n C8 H81 DAO sing 106 n n C8 H82 DAO sing 107 n n C9 C10 DAO sing 108 n n C9 H91 DAO sing 109 n n C9 H92 DAO sing 110 n n C10 C11 DAO sing 111 n n C10 H101 DAO sing 112 n n C10 H102 DAO sing 113 n n C11 C12 DAO sing 114 n n C11 H111 DAO sing 115 n n C11 H112 DAO sing 116 n n C12 H121 DAO sing 117 n n C12 H122 DAO sing 118 n n C12 H123 DAO sing 119 n n # _atom_sites.entry_id 6KSL _atom_sites.fract_transf_matrix[1][1] 0.00609 _atom_sites.fract_transf_matrix[1][2] 0.003516 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007032 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004291 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 1 ZN ZN . D 3 CA A 1 402 1 CA CA . E 4 DAO A 1 403 1 DAO DAO . F 5 BUA A 1 404 2 BUA BUA . G 2 ZN B 1 401 1 ZN ZN . H 3 CA B 1 402 1 CA CA . I 4 DAO B 1 403 2 DAO DAO . J 4 DAO B 1 404 3 DAO DAO . K 5 BUA B 1 405 1 BUA BUA . L 6 HOH A 1 501 1 HOH HOH . L 6 HOH A 2 502 8 HOH HOH . L 6 HOH A 3 503 9 HOH HOH . L 6 HOH A 4 504 6 HOH HOH . L 6 HOH A 5 505 4 HOH HOH . L 6 HOH A 6 506 11 HOH HOH . L 6 HOH A 7 507 10 HOH HOH . M 6 HOH B 1 501 12 HOH HOH . M 6 HOH B 2 502 3 HOH HOH . M 6 HOH B 3 503 7 HOH HOH . M 6 HOH B 4 504 5 HOH HOH . M 6 HOH B 5 505 2 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 DAO . . . J 4 -6.684 77.346 -13.848 1 135.17 ? O1 DAO 404 B 1 HETATM 2 O O2 DAO . . . J 4 -8.62 76.713 -13.09 1 108.67 ? O2 DAO 404 B 1 HETATM 3 C C1 DAO . . . J 4 -7.415 76.474 -13.333 1 121.51 ? C1 DAO 404 B 1 HETATM 4 C C2 DAO . . . J 4 -6.836 75.101 -13.013 1 124.93 ? C2 DAO 404 B 1 HETATM 5 C C3 DAO . . . J 4 -5.329 75.124 -12.729 1 114.84 ? C3 DAO 404 B 1 HETATM 6 C C4 DAO . . . J 4 -4.598 74.26 -13.749 1 113.27 ? C4 DAO 404 B 1 HETATM 7 C C5 DAO . . . J 4 -3.387 73.66 -13.065 1 112.8 ? C5 DAO 404 B 1 HETATM 8 C C6 DAO . . . J 4 -3.099 72.203 -13.42 1 107.34 ? C6 DAO 404 B 1 HETATM 9 C C7 DAO . . . J 4 -2.255 71.556 -12.33 1 95.87 ? C7 DAO 404 B 1 HETATM 10 C C8 DAO . . . J 4 -0.763 71.745 -12.598 1 125.28 ? C8 DAO 404 B 1 HETATM 11 C C9 DAO . . . J 4 -0.188 73.139 -12.272 1 130.6 ? C9 DAO 404 B 1 HETATM 12 C C10 DAO . . . J 4 0.701 73.726 -13.379 1 134.44 ? C10 DAO 404 B 1 HETATM 13 C C11 DAO . . . J 4 -0.067 74.536 -14.433 1 142.36 ? C11 DAO 404 B 1 HETATM 14 C C12 DAO . . . J 4 -0.201 73.824 -15.769 1 126.09 ? C12 DAO 404 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 14 #