data_6KSM
#
_model_server_result.job_id            GziwiK9D3I4ebwrWmukcSg 
_model_server_result.datetime_utc      '2025-01-11 13:05:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ksm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":405}' 
#
_entry.id    6KSM 
#
_exptl.entry_id    6KSM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              200.318 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LAURIC ACID' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6KSM 
_cell.length_a            132.51 
_cell.length_b            132.51 
_cell.length_c            248.243 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6KSM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        91 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 G N N 
? 5 L N N 
? 5 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A CB SER 130 A SER 116 1_555 E O2' DH9 . A DH9 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.392 ? 
metalc ? metalc1 A NE2 HIS 98 A HIS 84 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.821 ? 
metalc ? metalc2 A NE2 HIS 104 A HIS 90 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
metalc ? metalc3 A OD2 ASP 250 A ASP 236 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.939 ? 
metalc ? metalc4 A O GLY 297 A GLY 283 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? 
metalc ? metalc5 A OD2 ASP 362 A ASP 348 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? 
metalc ? metalc6 A OD1 ASP 365 A ASP 351 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.559 ? 
metalc ? metalc7 A OD2 ASP 365 A ASP 351 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? 
metalc ? metalc8 A OD2 ASP 370 A ASP 356 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.763 ? 
metalc ? metalc9 A OD2 ASP 373 A ASP 359 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? 
metalc ? metalc10 B OD1 ASP 78 B ASP 64 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.893 ? 
metalc ? metalc11 B NE2 HIS 98 B HIS 84 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
metalc ? metalc12 B NE2 HIS 104 B HIS 90 1_555 I ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc13 B O GLY 297 B GLY 283 1_555 J CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? 
metalc ? metalc14 B OD2 ASP 362 B ASP 348 1_555 J CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? 
metalc ? metalc15 B OD1 ASP 365 B ASP 351 1_555 J CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? 
metalc ? metalc16 B OD2 ASP 365 B ASP 351 1_555 J CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc17 B OD2 ASP 370 B ASP 356 1_555 J CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.47 ? 
metalc ? metalc18 B OD2 ASP 373 B ASP 359 1_555 J CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? 
#
_chem_comp.formula           'C12 H24 O2' 
_chem_comp.formula_weight    200.318 
_chem_comp.id                DAO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LAURIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C1 DAO doub 83 n n 
O2 C1 DAO sing 84 n n 
O2 HO2 DAO sing 85 n n 
C1 C2 DAO sing 86 n n 
C2 C3 DAO sing 87 n n 
C2 H21 DAO sing 88 n n 
C2 H22 DAO sing 89 n n 
C3 C4 DAO sing 90 n n 
C3 H31 DAO sing 91 n n 
C3 H32 DAO sing 92 n n 
C4 C5 DAO sing 93 n n 
C4 H41 DAO sing 94 n n 
C4 H42 DAO sing 95 n n 
C5 C6 DAO sing 96 n n 
C5 H51 DAO sing 97 n n 
C5 H52 DAO sing 98 n n 
C6 C7 DAO sing 99 n n 
C6 H61 DAO sing 100 n n 
C6 H62 DAO sing 101 n n 
C7 C8 DAO sing 102 n n 
C7 H71 DAO sing 103 n n 
C7 H72 DAO sing 104 n n 
C8 C9 DAO sing 105 n n 
C8 H81 DAO sing 106 n n 
C8 H82 DAO sing 107 n n 
C9 C10 DAO sing 108 n n 
C9 H91 DAO sing 109 n n 
C9 H92 DAO sing 110 n n 
C10 C11 DAO sing 111 n n 
C10 H101 DAO sing 112 n n 
C10 H102 DAO sing 113 n n 
C11 C12 DAO sing 114 n n 
C11 H111 DAO sing 115 n n 
C11 H112 DAO sing 116 n n 
C12 H121 DAO sing 117 n n 
C12 H122 DAO sing 118 n n 
C12 H123 DAO sing 119 n n 
#
_atom_sites.entry_id                     6KSM 
_atom_sites.fract_transf_matrix[1][1]    0.007547 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007547 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004028 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 401 1 ZN ZN . 
D 3 CA A 1 402 1 CA CA . 
E 4 DH9 A 1 403 1 DH9 DH9 . 
F 5 DAO A 1 404 1 DAO DAO . 
G 5 DAO A 1 405 4 DAO DAO . 
H 6 BUA A 1 406 1 BUA BUA . 
I 2 ZN B 1 401 2 ZN ZN . 
J 3 CA B 1 402 2 CA CA . 
K 4 DH9 B 1 403 2 DH9 DH9 . 
L 5 DAO B 1 404 2 DAO DAO . 
M 5 DAO B 1 405 3 DAO DAO . 
N 7 STE B 1 406 1 STE STE . 
O 6 BUA B 1 407 2 BUA BUA . 
P 8 HOH A 1 501 39 HOH HOH . 
P 8 HOH A 2 502 30 HOH HOH . 
P 8 HOH A 3 503 26 HOH HOH . 
P 8 HOH A 4 504 44 HOH HOH . 
P 8 HOH A 5 505 55 HOH HOH . 
P 8 HOH A 6 506 36 HOH HOH . 
P 8 HOH A 7 507 41 HOH HOH . 
P 8 HOH A 8 508 16 HOH HOH . 
P 8 HOH A 9 509 34 HOH HOH . 
P 8 HOH A 10 510 32 HOH HOH . 
P 8 HOH A 11 511 54 HOH HOH . 
P 8 HOH A 12 512 20 HOH HOH . 
P 8 HOH A 13 513 28 HOH HOH . 
P 8 HOH A 14 514 6 HOH HOH . 
P 8 HOH A 15 515 27 HOH HOH . 
P 8 HOH A 16 516 14 HOH HOH . 
P 8 HOH A 17 517 13 HOH HOH . 
P 8 HOH A 18 518 51 HOH HOH . 
P 8 HOH A 19 519 4 HOH HOH . 
P 8 HOH A 20 520 9 HOH HOH . 
P 8 HOH A 21 521 15 HOH HOH . 
P 8 HOH A 22 522 22 HOH HOH . 
P 8 HOH A 23 523 19 HOH HOH . 
P 8 HOH A 24 524 49 HOH HOH . 
P 8 HOH A 25 525 59 HOH HOH . 
P 8 HOH A 26 526 1 HOH HOH . 
P 8 HOH A 27 527 53 HOH HOH . 
P 8 HOH A 28 528 8 HOH HOH . 
P 8 HOH A 29 529 50 HOH HOH . 
P 8 HOH A 30 530 21 HOH HOH . 
P 8 HOH A 31 531 35 HOH HOH . 
P 8 HOH A 32 532 33 HOH HOH . 
P 8 HOH A 33 533 37 HOH HOH . 
P 8 HOH A 34 534 23 HOH HOH . 
Q 8 HOH B 1 501 48 HOH HOH . 
Q 8 HOH B 2 502 7 HOH HOH . 
Q 8 HOH B 3 503 58 HOH HOH . 
Q 8 HOH B 4 504 57 HOH HOH . 
Q 8 HOH B 5 505 29 HOH HOH . 
Q 8 HOH B 6 506 42 HOH HOH . 
Q 8 HOH B 7 507 3 HOH HOH . 
Q 8 HOH B 8 508 31 HOH HOH . 
Q 8 HOH B 9 509 25 HOH HOH . 
Q 8 HOH B 10 510 38 HOH HOH . 
Q 8 HOH B 11 511 43 HOH HOH . 
Q 8 HOH B 12 512 56 HOH HOH . 
Q 8 HOH B 13 513 2 HOH HOH . 
Q 8 HOH B 14 514 10 HOH HOH . 
Q 8 HOH B 15 515 11 HOH HOH . 
Q 8 HOH B 16 516 45 HOH HOH . 
Q 8 HOH B 17 517 17 HOH HOH . 
Q 8 HOH B 18 518 12 HOH HOH . 
Q 8 HOH B 19 519 47 HOH HOH . 
Q 8 HOH B 20 520 40 HOH HOH . 
Q 8 HOH B 21 521 18 HOH HOH . 
Q 8 HOH B 22 522 5 HOH HOH . 
Q 8 HOH B 23 523 46 HOH HOH . 
Q 8 HOH B 24 524 52 HOH HOH . 
Q 8 HOH B 25 525 24 HOH HOH . 
Q 8 HOH B 26 526 60 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 DAO . . . M 5 47.526 24.516 -24.537 1 99.37 ? O1 DAO 405 B 1 
HETATM 2 O O2 DAO . . . M 5 49.073 24.993 -23.139 1 77.94 ? O2 DAO 405 B 1 
HETATM 3 C C1 DAO . . . M 5 47.931 24.502 -23.358 1 93.62 ? C1 DAO 405 B 1 
HETATM 4 C C2 DAO . . . M 5 47.031 23.899 -22.255 1 78.77 ? C2 DAO 405 B 1 
HETATM 5 C C3 DAO . . . M 5 47.45 22.459 -21.869 1 66.17 ? C3 DAO 405 B 1 
HETATM 6 C C4 DAO . . . M 5 46.254 21.567 -21.587 1 78.91 ? C4 DAO 405 B 1 
HETATM 7 C C5 DAO . . . M 5 44.99 22.349 -21.163 1 95.34 ? C5 DAO 405 B 1 
HETATM 8 C C6 DAO . . . M 5 44.101 21.568 -20.179 1 109.99 ? C6 DAO 405 B 1 
HETATM 9 C C7 DAO . . . M 5 43.471 22.468 -19.104 1 115.04 ? C7 DAO 405 B 1 
HETATM 10 C C8 DAO . . . M 5 42.102 23.05 -19.492 1 118.17 ? C8 DAO 405 B 1 
HETATM 11 C C9 DAO . . . M 5 42.177 24.503 -20.006 1 110.76 ? C9 DAO 405 B 1 
HETATM 12 C C10 DAO . . . M 5 40.768 25.119 -20.135 1 103.45 ? C10 DAO 405 B 1 
HETATM 13 C C11 DAO . . . M 5 40.705 26.586 -20.61 1 89.76 ? C11 DAO 405 B 1 
HETATM 14 C C12 DAO . . . M 5 39.27 27.117 -20.639 1 75.87 ? C12 DAO 405 B 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           274 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           14 
#