data_6KTX # _model_server_result.job_id qbaAkDLRdYQjTLD6fA84pg _model_server_result.datetime_utc '2024-10-25 02:32:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ktx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":506}' # _entry.id 6KTX # _exptl.entry_id 6KTX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6KTX _cell.length_a 88.583 _cell.length_b 111.387 _cell.length_c 60.285 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6KTX _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O TRP 219 A TRP 216 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc2 A OD1 ASN 220 A ASN 217 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.404 ? metalc ? metalc3 A O THR 417 A THR 414 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc4 A O ASP 440 A ASP 437 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc5 A OD1 ASP 440 A ASP 437 1_555 B MG MG . A MG 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? metalc ? metalc6 B MG MG . A MG 501 1_555 P O HOH . A HOH 696 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 274 n n C1 C2 PEG sing 275 n n C1 H11 PEG sing 276 n n C1 H12 PEG sing 277 n n O1 HO1 PEG sing 278 n n C2 O2 PEG sing 279 n n C2 H21 PEG sing 280 n n C2 H22 PEG sing 281 n n O2 C3 PEG sing 282 n n C3 C4 PEG sing 283 n n C3 H31 PEG sing 284 n n C3 H32 PEG sing 285 n n C4 O4 PEG sing 286 n n C4 H41 PEG sing 287 n n C4 H42 PEG sing 288 n n O4 HO4 PEG sing 289 n n # _atom_sites.entry_id 6KTX _atom_sites.fract_transf_matrix[1][1] 0.011289 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008978 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016588 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 501 1 MG MG . C 3 CL A 1 502 1 CL CL . D 3 CL A 1 503 2 CL CL . E 3 CL A 1 504 3 CL CL . F 4 PEG A 1 505 2 PEG PEG . G 4 PEG A 1 506 3 PEG PEG . H 5 MPO A 1 507 1 MPO MPO . I 6 EDO A 1 508 1 EDO EDO . J 6 EDO A 1 509 2 EDO EDO . K 6 EDO A 1 510 3 EDO EDO . L 6 EDO A 1 511 4 EDO EDO . M 6 EDO A 1 512 5 EDO EDO . N 7 PGE A 1 513 1 PGE PGE . O 7 PGE A 1 514 2 PGE PGE . P 8 HOH A 1 601 197 HOH HOH . P 8 HOH A 2 602 82 HOH HOH . P 8 HOH A 3 603 125 HOH HOH . P 8 HOH A 4 604 48 HOH HOH . P 8 HOH A 5 605 41 HOH HOH . P 8 HOH A 6 606 157 HOH HOH . P 8 HOH A 7 607 92 HOH HOH . P 8 HOH A 8 608 72 HOH HOH . P 8 HOH A 9 609 44 HOH HOH . P 8 HOH A 10 610 119 HOH HOH . P 8 HOH A 11 611 155 HOH HOH . P 8 HOH A 12 612 99 HOH HOH . P 8 HOH A 13 613 18 HOH HOH . P 8 HOH A 14 614 171 HOH HOH . P 8 HOH A 15 615 101 HOH HOH . P 8 HOH A 16 616 206 HOH HOH . P 8 HOH A 17 617 229 HOH HOH . P 8 HOH A 18 618 83 HOH HOH . P 8 HOH A 19 619 9 HOH HOH . P 8 HOH A 20 620 49 HOH HOH . P 8 HOH A 21 621 140 HOH HOH . P 8 HOH A 22 622 53 HOH HOH . P 8 HOH A 23 623 246 HOH HOH . P 8 HOH A 24 624 10 HOH HOH . P 8 HOH A 25 625 186 HOH HOH . P 8 HOH A 26 626 39 HOH HOH . P 8 HOH A 27 627 35 HOH HOH . P 8 HOH A 28 628 142 HOH HOH . P 8 HOH A 29 629 12 HOH HOH . P 8 HOH A 30 630 14 HOH HOH . P 8 HOH A 31 631 175 HOH HOH . P 8 HOH A 32 632 6 HOH HOH . P 8 HOH A 33 633 21 HOH HOH . P 8 HOH A 34 634 111 HOH HOH . P 8 HOH A 35 635 110 HOH HOH . P 8 HOH A 36 636 43 HOH HOH . P 8 HOH A 37 637 141 HOH HOH . P 8 HOH A 38 638 24 HOH HOH . P 8 HOH A 39 639 20 HOH HOH . P 8 HOH A 40 640 105 HOH HOH . P 8 HOH A 41 641 127 HOH HOH . P 8 HOH A 42 642 268 HOH HOH . P 8 HOH A 43 643 100 HOH HOH . P 8 HOH A 44 644 73 HOH HOH . P 8 HOH A 45 645 29 HOH HOH . P 8 HOH A 46 646 62 HOH HOH . P 8 HOH A 47 647 22 HOH HOH . P 8 HOH A 48 648 38 HOH HOH . P 8 HOH A 49 649 59 HOH HOH . P 8 HOH A 50 650 205 HOH HOH . P 8 HOH A 51 651 163 HOH HOH . P 8 HOH A 52 652 8 HOH HOH . P 8 HOH A 53 653 117 HOH HOH . P 8 HOH A 54 654 4 HOH HOH . P 8 HOH A 55 655 23 HOH HOH . P 8 HOH A 56 656 185 HOH HOH . P 8 HOH A 57 657 70 HOH HOH . P 8 HOH A 58 658 78 HOH HOH . P 8 HOH A 59 659 88 HOH HOH . P 8 HOH A 60 660 17 HOH HOH . P 8 HOH A 61 661 194 HOH HOH . P 8 HOH A 62 662 184 HOH HOH . P 8 HOH A 63 663 187 HOH HOH . P 8 HOH A 64 664 183 HOH HOH . P 8 HOH A 65 665 152 HOH HOH . P 8 HOH A 66 666 66 HOH HOH . P 8 HOH A 67 667 263 HOH HOH . P 8 HOH A 68 668 148 HOH HOH . P 8 HOH A 69 669 32 HOH HOH . P 8 HOH A 70 670 254 HOH HOH . P 8 HOH A 71 671 15 HOH HOH . P 8 HOH A 72 672 80 HOH HOH . P 8 HOH A 73 673 42 HOH HOH . P 8 HOH A 74 674 54 HOH HOH . P 8 HOH A 75 675 51 HOH HOH . P 8 HOH A 76 676 170 HOH HOH . P 8 HOH A 77 677 2 HOH HOH . P 8 HOH A 78 678 143 HOH HOH . P 8 HOH A 79 679 11 HOH HOH . P 8 HOH A 80 680 106 HOH HOH . P 8 HOH A 81 681 116 HOH HOH . P 8 HOH A 82 682 199 HOH HOH . P 8 HOH A 83 683 46 HOH HOH . P 8 HOH A 84 684 36 HOH HOH . P 8 HOH A 85 685 57 HOH HOH . P 8 HOH A 86 686 115 HOH HOH . P 8 HOH A 87 687 132 HOH HOH . P 8 HOH A 88 688 178 HOH HOH . P 8 HOH A 89 689 76 HOH HOH . P 8 HOH A 90 690 31 HOH HOH . P 8 HOH A 91 691 75 HOH HOH . P 8 HOH A 92 692 1 HOH HOH . P 8 HOH A 93 693 7 HOH HOH . P 8 HOH A 94 694 161 HOH HOH . P 8 HOH A 95 695 126 HOH HOH . P 8 HOH A 96 696 3 HOH HOH . P 8 HOH A 97 697 107 HOH HOH . P 8 HOH A 98 698 34 HOH HOH . P 8 HOH A 99 699 55 HOH HOH . P 8 HOH A 100 700 90 HOH HOH . P 8 HOH A 101 701 177 HOH HOH . P 8 HOH A 102 702 180 HOH HOH . P 8 HOH A 103 703 96 HOH HOH . P 8 HOH A 104 704 79 HOH HOH . P 8 HOH A 105 705 260 HOH HOH . P 8 HOH A 106 706 87 HOH HOH . P 8 HOH A 107 707 242 HOH HOH . P 8 HOH A 108 708 215 HOH HOH . P 8 HOH A 109 709 130 HOH HOH . P 8 HOH A 110 710 69 HOH HOH . P 8 HOH A 111 711 63 HOH HOH . P 8 HOH A 112 712 218 HOH HOH . P 8 HOH A 113 713 138 HOH HOH . P 8 HOH A 114 714 81 HOH HOH . P 8 HOH A 115 715 61 HOH HOH . P 8 HOH A 116 716 30 HOH HOH . P 8 HOH A 117 717 94 HOH HOH . P 8 HOH A 118 718 202 HOH HOH . P 8 HOH A 119 719 85 HOH HOH . P 8 HOH A 120 720 84 HOH HOH . P 8 HOH A 121 721 147 HOH HOH . P 8 HOH A 122 722 108 HOH HOH . P 8 HOH A 123 723 224 HOH HOH . P 8 HOH A 124 724 19 HOH HOH . P 8 HOH A 125 725 154 HOH HOH . P 8 HOH A 126 726 135 HOH HOH . P 8 HOH A 127 727 103 HOH HOH . P 8 HOH A 128 728 129 HOH HOH . P 8 HOH A 129 729 13 HOH HOH . P 8 HOH A 130 730 25 HOH HOH . P 8 HOH A 131 731 16 HOH HOH . P 8 HOH A 132 732 95 HOH HOH . P 8 HOH A 133 733 169 HOH HOH . P 8 HOH A 134 734 113 HOH HOH . P 8 HOH A 135 735 91 HOH HOH . P 8 HOH A 136 736 167 HOH HOH . P 8 HOH A 137 737 27 HOH HOH . P 8 HOH A 138 738 208 HOH HOH . P 8 HOH A 139 739 86 HOH HOH . P 8 HOH A 140 740 114 HOH HOH . P 8 HOH A 141 741 37 HOH HOH . P 8 HOH A 142 742 26 HOH HOH . P 8 HOH A 143 743 28 HOH HOH . P 8 HOH A 144 744 173 HOH HOH . P 8 HOH A 145 745 45 HOH HOH . P 8 HOH A 146 746 136 HOH HOH . P 8 HOH A 147 747 236 HOH HOH . P 8 HOH A 148 748 58 HOH HOH . P 8 HOH A 149 749 50 HOH HOH . P 8 HOH A 150 750 67 HOH HOH . P 8 HOH A 151 751 89 HOH HOH . P 8 HOH A 152 752 247 HOH HOH . P 8 HOH A 153 753 145 HOH HOH . P 8 HOH A 154 754 134 HOH HOH . P 8 HOH A 155 755 131 HOH HOH . P 8 HOH A 156 756 243 HOH HOH . P 8 HOH A 157 757 60 HOH HOH . P 8 HOH A 158 758 133 HOH HOH . P 8 HOH A 159 759 237 HOH HOH . P 8 HOH A 160 760 109 HOH HOH . P 8 HOH A 161 761 52 HOH HOH . P 8 HOH A 162 762 139 HOH HOH . P 8 HOH A 163 763 252 HOH HOH . P 8 HOH A 164 764 146 HOH HOH . P 8 HOH A 165 765 179 HOH HOH . P 8 HOH A 166 766 256 HOH HOH . P 8 HOH A 167 767 150 HOH HOH . P 8 HOH A 168 768 104 HOH HOH . P 8 HOH A 169 769 124 HOH HOH . P 8 HOH A 170 770 204 HOH HOH . P 8 HOH A 171 771 97 HOH HOH . P 8 HOH A 172 772 162 HOH HOH . P 8 HOH A 173 773 123 HOH HOH . P 8 HOH A 174 774 47 HOH HOH . P 8 HOH A 175 775 227 HOH HOH . P 8 HOH A 176 776 65 HOH HOH . P 8 HOH A 177 777 228 HOH HOH . P 8 HOH A 178 778 68 HOH HOH . P 8 HOH A 179 779 56 HOH HOH . P 8 HOH A 180 780 121 HOH HOH . P 8 HOH A 181 781 77 HOH HOH . P 8 HOH A 182 782 149 HOH HOH . P 8 HOH A 183 783 233 HOH HOH . P 8 HOH A 184 784 122 HOH HOH . P 8 HOH A 185 785 40 HOH HOH . P 8 HOH A 186 786 160 HOH HOH . P 8 HOH A 187 787 168 HOH HOH . P 8 HOH A 188 788 192 HOH HOH . P 8 HOH A 189 789 193 HOH HOH . P 8 HOH A 190 790 223 HOH HOH . P 8 HOH A 191 791 211 HOH HOH . P 8 HOH A 192 792 251 HOH HOH . P 8 HOH A 193 793 181 HOH HOH . P 8 HOH A 194 794 158 HOH HOH . P 8 HOH A 195 795 212 HOH HOH . P 8 HOH A 196 796 238 HOH HOH . P 8 HOH A 197 797 190 HOH HOH . P 8 HOH A 198 798 216 HOH HOH . P 8 HOH A 199 799 188 HOH HOH . P 8 HOH A 200 800 64 HOH HOH . P 8 HOH A 201 801 172 HOH HOH . P 8 HOH A 202 802 220 HOH HOH . P 8 HOH A 203 803 259 HOH HOH . P 8 HOH A 204 804 201 HOH HOH . P 8 HOH A 205 805 235 HOH HOH . P 8 HOH A 206 806 232 HOH HOH . P 8 HOH A 207 807 267 HOH HOH . P 8 HOH A 208 808 245 HOH HOH . P 8 HOH A 209 809 112 HOH HOH . P 8 HOH A 210 810 217 HOH HOH . P 8 HOH A 211 811 230 HOH HOH . P 8 HOH A 212 812 255 HOH HOH . P 8 HOH A 213 813 266 HOH HOH . P 8 HOH A 214 814 98 HOH HOH . P 8 HOH A 215 815 120 HOH HOH . P 8 HOH A 216 816 174 HOH HOH . P 8 HOH A 217 817 240 HOH HOH . P 8 HOH A 218 818 209 HOH HOH . P 8 HOH A 219 819 214 HOH HOH . P 8 HOH A 220 820 166 HOH HOH . P 8 HOH A 221 821 189 HOH HOH . P 8 HOH A 222 822 200 HOH HOH . P 8 HOH A 223 823 203 HOH HOH . P 8 HOH A 224 824 164 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . G 4 14.067 114.65 72.363 1 51.33 ? C1 PEG 506 A 1 HETATM 2 O O1 PEG . . . G 4 14.49 113.729 73.374 1 58.47 ? O1 PEG 506 A 1 HETATM 3 C C2 PEG . . . G 4 15.007 115.85 72.324 1 55.44 ? C2 PEG 506 A 1 HETATM 4 O O2 PEG . . . G 4 15.403 116.016 70.964 1 56.69 ? O2 PEG 506 A 1 HETATM 5 C C3 PEG . . . G 4 16.797 116.294 70.821 1 42.58 ? C3 PEG 506 A 1 HETATM 6 C C4 PEG . . . G 4 17.639 115.346 71.677 1 49.85 ? C4 PEG 506 A 1 HETATM 7 O O4 PEG . . . G 4 17.315 113.972 71.422 1 55.22 ? O4 PEG 506 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 7 #